Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g416.t1
Gene name
Locationscaffold_01:1057556..1059001
Strand+
Gene length (bp)1445
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17863 AAA_lid_2 AAA lid domain 1.0E-07 270 328

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g416.t1
MDYTDLADIADIAQQLSDLEVALLLCLVAREHCLIETTSHCINDLAKELALIGSTTFNYSYCILDCSTATSIDDV
FNDVLTPDARANYRPSRQWLNTESSSKRSSYKSLGDYSKLTPFSQLGSNVVNIVVAKNFNFVSDDIQMHMLQLMR
SKELVTENGTLSAPEDFLFIPLVARDFDQLRPSLKLHLNDNLFISHFHSPDVGYTYLEENDWLSDGQMSASSVIH
NSKGKQTKSATVSPLVVGQLRETSASVSTSAEVVRYIQDIVVFLRLSRAVAGGVSANANIHFSRFAQLLAPLHGI
DYLTPSIVALAARKVFRHRIIVTPPGEDRSLQYGSNLRAVADILVDVTPDSILDGVLALEPPL*
Coding >Pro_DTO377G3_2|g416.t1
ATGGATTATACAGATCTTGCTGATATTGCTGATATTGCTCAACAACTATCTGACCTTGAAGTGGCCCTTTTACTA
TGCCTTGTTGCCCGCGAACATTGCTTGATCGAGACCACCAGCCACTGTATTAATGACCTTGCCAAAGAACTCGCC
TTAATTGGCTCAACTACATTCAATTACTCATACTGCATCCTTGACTGTTCAACTGCAACATCTATTGACGACGTC
TTTAATGACGTTCTCACCCCGGATGCACGCGCAAACTATCGCCCATCGCGTCAGTGGTTGAACACCGAATCATCA
AGCAAACGTTCTTCCTATAAGAGCCTTGGGGATTACAGCAAATTAACTCCATTTTCACAACTCGGCAGTAACGTT
GTCAATATTGTAGTCGCCAAAAACTTCAATTTTGTCAGCGATGATATCCAAATGCACATGCTGCAGTTAATGCGA
TCGAAGGAGTTGGTCACCGAGAACGGGACCCTGAGTGCGCCTGAGGACTTCCTCTTCATTCCTCTTGTGGCACGA
GATTTCGATCAGCTCCGGCCATCTTTGAAACTACATCTGAATGACAATCTCTTCATTTCTCATTTCCACAGCCCG
GATGTTGGATATACCTATCTTGAAGAGAATGACTGGCTTTCAGATGGACAAATGTCGGCTTCCTCTGTCATTCAT
AATTCAAAAGGCAAGCAAACGAAGAGCGCTACAGTCAGTCCGTTGGTGGTGGGTCAACTTCGAGAAACAAGTGCG
TCGGTGAGCACGAGCGCGGAAGTCGTTCGATACATCCAGGATATCGTTGTATTTCTGCGGCTCAGTCGCGCTGTT
GCAGGTGGTGTGTCTGCGAATGCAAATATTCATTTTTCTCGATTTGCACAACTTCTAGCTCCTCTGCATGGTATC
GATTATTTGACTCCCTCCATCGTGGCCCTAGCCGCCAGGAAAGTCTTTCGCCATCGCATTATTGTCACTCCTCCT
GGCGAAGACCGCAGTCTACAGTATGGGAGTAATTTACGTGCGGTAGCTGATATTCTCGTTGATGTGACACCGGAT
TCGATACTAGATGGAGTTCTGGCGCTGGAGCCGCCTTTATGA
Transcript >Pro_DTO377G3_2|g416.t1
ATGGATTATACAGATCTTGCTGATATTGCTGATATTGCTCAACAACTATCTGACCTTGAAGTGGCCCTTTTACTA
TGCCTTGTTGCCCGCGAACATTGCTTGATCGAGACCACCAGCCACTGTATTAATGACCTTGCCAAAGAACTCGCC
TTAATTGGCTCAACTACATTCAATTACTCATACTGCATCCTTGACTGTTCAACTGCAACATCTATTGACGACGTC
TTTAATGACGTTCTCACCCCGGATGCACGCGCAAACTATCGCCCATCGCGTCAGTGGTTGAACACCGAATCATCA
AGCAAACGTTCTTCCTATAAGAGCCTTGGGGATTACAGCAAATTAACTCCATTTTCACAACTCGGCAGTAACGTT
GTCAATATTGTAGTCGCCAAAAACTTCAATTTTGTCAGCGATGATATCCAAATGCACATGCTGCAGTTAATGCGA
TCGAAGGAGTTGGTCACCGAGAACGGGACCCTGAGTGCGCCTGAGGACTTCCTCTTCATTCCTCTTGTGGCACGA
GATTTCGATCAGCTCCGGCCATCTTTGAAACTACATCTGAATGACAATCTCTTCATTTCTCATTTCCACAGCCCG
GATGTTGGATATACCTATCTTGAAGAGAATGACTGGCTTTCAGATGGACAAATGTCGGCTTCCTCTGTCATTCAT
AATTCAAAAGGCAAGCAAACGAAGAGCGCTACAGTCAGTCCGTTGGTGGTGGGTCAACTTCGAGAAACAAGTGCG
TCGGTGAGCACGAGCGCGGAAGTCGTTCGATACATCCAGGATATCGTTGTATTTCTGCGGCTCAGTCGCGCTGTT
GCAGGTGGTGTGTCTGCGAATGCAAATATTCATTTTTCTCGATTTGCACAACTTCTAGCTCCTCTGCATGGTATC
GATTATTTGACTCCCTCCATCGTGGCCCTAGCCGCCAGGAAAGTCTTTCGCCATCGCATTATTGTCACTCCTCCT
GGCGAAGACCGCAGTCTACAGTATGGGAGTAATTTACGTGCGGTAGCTGATATTCTCGTTGATGTGACACCGGAT
TCGATACTAGATGGAGTTCTGGCGCTGGAGCCGCCTTTATGA
Gene >Pro_DTO377G3_2|g416.t1
ATGGATTATACAGATCTTGCTGATATTGCTGATATTGCTCAACAACTATCTGACCTTGAAGTGGCCCTTTTACTA
TGCCTTGTTGCCCGCGAACATTGCTTGATCGAGACCACCAGCCACTGTATTAATGACCTTGCCAAAGAACTCGCC
TTAGTATGTCTATGCACCCGGGATATTGGGATGGTATCTGATGAAAGACAGATTGGCTCAACTACATTCAATTAC
TCATACTGCATCCTTGACTGTTCAACTGCAACATCTATTGACGACGTCTTTAATGACGTTCTCACCCCGGATGCA
CGCGCAAACTATCGCCCATCGCGTCAGTGGTTGAACACCGAATCAGTATGTTGATATTTTGAATGCTTTTTGCTA
TGGATATCGTTGTATAGACTAATCAAATTAGTCAAGCAAACGTTCTTCCTATAAGAGCCTTGGGGATTACAGCAA
ATTAACTCCATTTTCACAACTCGGCAGTAACGTTGTCAATATTGTAGTCGCCAAAAACTTCAATTTTGTCAGCGA
TGATATCCAAATGCACATGCTGCAGGTATCTATTCTGACTAGCAGCTCAATGGAGCCGATGCTGATATTTGCGAT
AGTTAATGCGATCGAAGGAGTTGGTCACCGAGAACGGGACCCTGAGTGCGCCTGAGGACTTCCTCTTCATTCCTC
TTGTGGCACGAGATTTCGATCAGCTCCGGCCATCTTTGAAACTACATCTGGTAAGTATTATTTGTGCGTGTCCGC
ATTTTGACTGCTTTACTTTAGCTAATGCCGCAGTAGAATGACAATCTCTTCATTTCTCATTTCCACAGCCCGGAT
GTTGGATATACCTATCTTGAAGAGAATGACTGGCTTTCAGATGGACAAATGTCGGCTTCCTCTGTCATTCATAAT
TCAAAAGGCAAGCAAACGAAGAGCGCTACAGTCAGTCCGTTGGTAAGTTTGATGATTTAGAATACGAACTGAACA
TAGAAATCGAATACTGGGCTCATGAACTTACAGGTGGTGGGTCAACTTCGAGAAACAAGTGCGTCGGTGAGCACG
AGCGCGGAAGTCGTTCGATACATCCAGGATATCGTTGTATTTCTGCGGCTCAGTCGCGCTGTTGCAGGTGGTGTG
TCTGCGAATGCAAATATTCATTTTTCTCGATTTGCACAGTGAGTTCGAATGTTTCCACCACCACCTATTACATCT
AGCTTATCTTACTGGTTCTCCTCTGCAGACTTCTAGCTCCTCTGCATGGTATCGATTATTTGACTCCCTCCATCG
TGGCCCTAGCCGCCAGGAAAGTCTTTCGCCATCGCATTATTGTCACTCCTCCTGGCGAAGACCGCAGTCTACAGT
ATGGGAGTAATTTACGTGCGGTAGCTGATATTCTCGTTGATGTGACACCGGATTCGATACTAGATGGAGTTCTGG
CGCTGGAGCCGCCTTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail