Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4116.t1
Gene name
Locationscaffold_08:45613..46586
Strand-
Gene length (bp)973
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03981 Ubiq_cyt_C_chap Ubiquinol-cytochrome C chaperone 4.9E-36 126 266

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4116.t1
MLSKRVSTLWAREIRGFQNLCLSRSASRSPITLVSASRVSTEQPLKSIITRSYSQGKVSDLAKNFSRRPGNAAET
YVAYGMTQKLFEACSSQADYKIPQASQKGVEVPKTEAGEDLGVGEGWWYKELGLLPTFSTWSQVTFLHMYLLTVR
LRALPHRDSVTTYSRHLIDHFSHEAEHRMDTYHDLGSRTIRNKYLKDLFIQWRGIIAAYDEGLAKGDAVLGAAVW
RNLWKGSQTGPDGKEEIDWAKVAQVVAYMRRVLSELSKKDEVDIVFSLGRDQKNTGIFAYSETDKKLVQANK*
Coding >Pro_DTO377G3_2|g4116.t1
ATGTTATCCAAGAGAGTATCAACACTATGGGCGCGCGAGATTCGTGGGTTCCAGAACCTCTGCCTTTCCAGATCT
GCTAGTCGCAGCCCGATAACACTGGTCTCCGCCTCCCGCGTGTCTACGGAACAGCCATTGAAATCGATCATCACT
CGATCATATTCGCAAGGCAAGGTCTCCGACTTGGCCAAGAACTTTTCCCGGAGACCTGGAAATGCCGCCGAGACT
TATGTTGCGTATGGCATGACACAGAAGCTATTCGAGGCCTGTTCCAGCCAAGCGGATTACAAAATTCCCCAAGCG
TCGCAAAAGGGAGTGGAGGTCCCGAAAACAGAAGCCGGTGAAGATCTTGGTGTTGGAGAGGGTTGGTGGTATAAA
GAGCTCGGCCTCTTGCCAACCTTTTCTACCTGGTCCCAGGTGACTTTCCTCCACATGTACCTCTTAACGGTTCGC
CTTCGTGCCCTGCCCCATCGCGATAGTGTTACTACCTACTCCCGCCACTTGATCGATCACTTTTCGCATGAAGCG
GAACACCGCATGGACACATATCATGATCTGGGTAGTCGCACTATTCGCAACAAGTACCTGAAGGATCTGTTCATT
CAATGGCGTGGAATCATTGCTGCATATGATGAAGGGCTGGCCAAAGGCGATGCGGTGCTGGGCGCTGCTGTCTGG
AGAAACCTCTGGAAGGGAAGTCAGACCGGACCGGATGGGAAAGAAGAAATTGACTGGGCCAAGGTTGCGCAGGTG
GTGGCCTACATGCGCCGAGTCTTGTCAGAGCTGTCCAAGAAGGACGAGGTGGATATTGTTTTCTCTCTTGGGCGT
GACCAAAAGAACACCGGCATCTTTGCGTACTCGGAGACGGACAAGAAACTCGTTCAAGCAAACAAATGA
Transcript >Pro_DTO377G3_2|g4116.t1
ATGTTATCCAAGAGAGTATCAACACTATGGGCGCGCGAGATTCGTGGGTTCCAGAACCTCTGCCTTTCCAGATCT
GCTAGTCGCAGCCCGATAACACTGGTCTCCGCCTCCCGCGTGTCTACGGAACAGCCATTGAAATCGATCATCACT
CGATCATATTCGCAAGGCAAGGTCTCCGACTTGGCCAAGAACTTTTCCCGGAGACCTGGAAATGCCGCCGAGACT
TATGTTGCGTATGGCATGACACAGAAGCTATTCGAGGCCTGTTCCAGCCAAGCGGATTACAAAATTCCCCAAGCG
TCGCAAAAGGGAGTGGAGGTCCCGAAAACAGAAGCCGGTGAAGATCTTGGTGTTGGAGAGGGTTGGTGGTATAAA
GAGCTCGGCCTCTTGCCAACCTTTTCTACCTGGTCCCAGGTGACTTTCCTCCACATGTACCTCTTAACGGTTCGC
CTTCGTGCCCTGCCCCATCGCGATAGTGTTACTACCTACTCCCGCCACTTGATCGATCACTTTTCGCATGAAGCG
GAACACCGCATGGACACATATCATGATCTGGGTAGTCGCACTATTCGCAACAAGTACCTGAAGGATCTGTTCATT
CAATGGCGTGGAATCATTGCTGCATATGATGAAGGGCTGGCCAAAGGCGATGCGGTGCTGGGCGCTGCTGTCTGG
AGAAACCTCTGGAAGGGAAGTCAGACCGGACCGGATGGGAAAGAAGAAATTGACTGGGCCAAGGTTGCGCAGGTG
GTGGCCTACATGCGCCGAGTCTTGTCAGAGCTGTCCAAGAAGGACGAGGTGGATATTGTTTTCTCTCTTGGGCGT
GACCAAAAGAACACCGGCATCTTTGCGTACTCGGAGACGGACAAGAAACTCGTTCAAGCAAACAAATGA
Gene >Pro_DTO377G3_2|g4116.t1
ATGTTATCCAAGAGAGTATCAACACTATGGGCGCGCGAGATTCGTGGGTTCCAGAACCTCTGCCTTTCCAGATCT
GCTAGTCGCAGCCCGATAACACTGGTCTCCGCCTCCCGCGTGTCTACGGAACAGCCATTGAAATCGATCATCACT
CGATCATATTCGCAAGGCAAGGTCTCCGACTTGGCCAAGAACTTTTCCCGGAGACCTGGAAATGCCGCCGAGACT
TATGTTGCGTATGGCATGACACAGAAGCTATTCGAGGCCTGTTCCAGCCAAGCGGATTACAAAATTCCCCAAGCG
TCGCAAAAGGGAGTGGAGGTCCCGAAAACAGAAGCCGGTGAAGATCTTGGTGTTGGAGAGGGTTGGTGGTATAAA
GGTGAGACGATACGAGCGGTCTCTGGCTTAGGCGATGATCTGCTTTGAAGACAATAAGCTAATCTCGGGCGTCGC
TGTAGAGCTCGGCCTCTTGCCAACCTTTTCTACCTGGTCCCAGGTGACTTTCCTCCACATGTACCTCTTAACGGT
TCGCCTTCGTGCCCTGCCCCATCGCGATAGTGTTACTACCTACTCCCGCCACTTGATCGATCACTTTTCGCATGA
AGCGGAACACCGCATGGACACATATCATGATCTGGGTAGTCGCACTATTCGCAACAAGTACCTGAAGGATCTGTT
CATTCAATGGCGTGGAATCATTGCTGCATATGATGAAGGGCTGGCCAAAGGCGATGCGGTGCTGGGCGCTGCTGT
CTGGAGAAACCTCTGGAAGGGAAGTCAGACCGGACCGGATGGGAAAGAAGAAATTGACTGGGCCAAGGTTGCGCA
GGTGGTGGCCTACATGCGCCGAGTCTTGTCAGAGCTGTCCAAGAAGGACGAGGTGGATATTGTTTTCTCTCTTGG
GCGTGACCAAAAGAACACCGGCATCTTTGCGTACTCGGAGACGGACAAGAAACTCGTTCAAGCAAACAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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