Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g411.t1
Gene name
Locationscaffold_01:1045657..1047327
Strand-
Gene length (bp)1670
Transcript length (bp)1425
Coding sequence length (bp)1425
Protein length (aa) 475

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08606 Prp19 Prp19/Pso4-like 2.0E-32 66 132
PF12894 ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 1.3E-05 322 370
PF00400 WD40 WD domain, G-beta repeat 4.4E-04 322 346

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g411.t1
MLCAISGEAPQVPVVSTKSGSVFEKRLIEAYIAEHGKDPVNGEELTTDDLIDLKSQRVVRPRPPTLTSIPSLLSV
FQEEWDALALETFTLQQNLAQTRRELSSALYQHDAAVRVIARLTQERDEAREALSNVSVGTTRAGGEAMQVDSTG
LPQAVLERIENTQAALSKTRRKRAVPEGWASSEAISTFKPSQVSEPLYPGGRALSINPTGDLALVGGVDGVAGVY
SLSQKSVVQTLKTDGPVTDATWAGNKAVVASSTGSVKVFENGAEVASFASHSGEVTAVTVHATGDIAASVGVDKS
YVLYDLATNTVVSQIFCDAALLSVNFHPDGHLIAAGGADGKVKIFDVKTGAAAADYTMSGPVKCLFFSENGTYLA
AVAAQSTTVSIWDLRSSKETKVLDTGSQIDSIFWDYTGQFLLTGGPSGVTVQQYSKASKGWSEPLRSAVPATSVA
WGSAAQSIVTLNEAGVITVLEAQS*
Coding >Pro_DTO377G3_2|g411.t1
ATGCTTTGTGCTATCTCCGGAGAAGCACCTCAAGTGCCCGTCGTCTCTACCAAGAGCGGCAGCGTATTTGAAAAG
CGCCTTATTGAAGCATACATTGCCGAGCATGGCAAAGATCCCGTGAACGGCGAGGAGCTTACCACCGACGATTTG
ATCGATCTCAAGTCGCAACGCGTTGTCCGACCTCGACCCCCTACTCTTACATCCATCCCGTCTCTGCTCAGCGTT
TTTCAAGAAGAGTGGGATGCCTTGGCCCTGGAGACCTTCACTTTGCAGCAGAATTTGGCACAGACAAGGCGCGAG
CTAAGTTCGGCACTCTATCAGCATGATGCCGCGGTGCGGGTGATTGCGCGCCTGACGCAGGAGAGGGACGAGGCC
CGCGAGGCACTTTCGAACGTTTCTGTTGGTACCACTCGCGCCGGAGGAGAGGCTATGCAAGTGGACTCCACGGGC
CTGCCCCAAGCAGTGTTGGAGCGAATTGAGAACACACAGGCAGCACTATCAAAGACCCGACGTAAGCGCGCAGTC
CCCGAGGGCTGGGCCTCAAGTGAGGCTATTTCCACATTTAAGCCATCTCAGGTCTCGGAACCTCTCTACCCCGGT
GGCCGCGCGTTATCTATCAACCCGACTGGTGACCTGGCTCTTGTTGGTGGTGTTGACGGCGTGGCTGGTGTCTAC
TCGCTCTCCCAGAAGAGTGTCGTACAGACCCTCAAGACAGATGGCCCAGTCACCGATGCGACATGGGCAGGAAAC
AAGGCCGTCGTTGCCTCCTCTACGGGCTCCGTCAAGGTCTTTGAGAATGGCGCTGAAGTTGCAAGCTTCGCCTCC
CACTCTGGTGAGGTGACGGCTGTCACAGTCCACGCTACTGGTGATATTGCTGCTTCTGTTGGTGTCGATAAGAGT
TATGTGCTTTATGATCTCGCCACCAACACCGTGGTCTCCCAAATTTTCTGCGATGCAGCTCTACTGTCTGTCAAC
TTCCACCCAGATGGTCACTTGATCGCGGCCGGTGGCGCAGACGGAAAAGTCAAGATCTTCGATGTCAAGACCGGC
GCCGCTGCTGCGGACTATACGATGTCGGGCCCAGTGAAATGTCTGTTCTTCTCTGAGAACGGTACTTACCTGGCT
GCGGTAGCCGCGCAGTCCACCACTGTATCAATCTGGGATCTCCGCAGCTCCAAGGAGACCAAGGTACTGGACACA
GGAAGCCAGATAGACTCAATCTTCTGGGATTATACTGGCCAATTCCTCTTGACTGGTGGGCCCAGCGGAGTAACT
GTCCAGCAATACTCAAAGGCCTCCAAGGGGTGGTCAGAGCCTCTGCGGAGTGCGGTCCCTGCTACCTCGGTTGCT
TGGGGATCAGCTGCTCAGAGTATTGTGACGTTGAATGAGGCGGGTGTGATCACAGTGCTAGAGGCACAGTCATGA
Transcript >Pro_DTO377G3_2|g411.t1
ATGCTTTGTGCTATCTCCGGAGAAGCACCTCAAGTGCCCGTCGTCTCTACCAAGAGCGGCAGCGTATTTGAAAAG
CGCCTTATTGAAGCATACATTGCCGAGCATGGCAAAGATCCCGTGAACGGCGAGGAGCTTACCACCGACGATTTG
ATCGATCTCAAGTCGCAACGCGTTGTCCGACCTCGACCCCCTACTCTTACATCCATCCCGTCTCTGCTCAGCGTT
TTTCAAGAAGAGTGGGATGCCTTGGCCCTGGAGACCTTCACTTTGCAGCAGAATTTGGCACAGACAAGGCGCGAG
CTAAGTTCGGCACTCTATCAGCATGATGCCGCGGTGCGGGTGATTGCGCGCCTGACGCAGGAGAGGGACGAGGCC
CGCGAGGCACTTTCGAACGTTTCTGTTGGTACCACTCGCGCCGGAGGAGAGGCTATGCAAGTGGACTCCACGGGC
CTGCCCCAAGCAGTGTTGGAGCGAATTGAGAACACACAGGCAGCACTATCAAAGACCCGACGTAAGCGCGCAGTC
CCCGAGGGCTGGGCCTCAAGTGAGGCTATTTCCACATTTAAGCCATCTCAGGTCTCGGAACCTCTCTACCCCGGT
GGCCGCGCGTTATCTATCAACCCGACTGGTGACCTGGCTCTTGTTGGTGGTGTTGACGGCGTGGCTGGTGTCTAC
TCGCTCTCCCAGAAGAGTGTCGTACAGACCCTCAAGACAGATGGCCCAGTCACCGATGCGACATGGGCAGGAAAC
AAGGCCGTCGTTGCCTCCTCTACGGGCTCCGTCAAGGTCTTTGAGAATGGCGCTGAAGTTGCAAGCTTCGCCTCC
CACTCTGGTGAGGTGACGGCTGTCACAGTCCACGCTACTGGTGATATTGCTGCTTCTGTTGGTGTCGATAAGAGT
TATGTGCTTTATGATCTCGCCACCAACACCGTGGTCTCCCAAATTTTCTGCGATGCAGCTCTACTGTCTGTCAAC
TTCCACCCAGATGGTCACTTGATCGCGGCCGGTGGCGCAGACGGAAAAGTCAAGATCTTCGATGTCAAGACCGGC
GCCGCTGCTGCGGACTATACGATGTCGGGCCCAGTGAAATGTCTGTTCTTCTCTGAGAACGGTACTTACCTGGCT
GCGGTAGCCGCGCAGTCCACCACTGTATCAATCTGGGATCTCCGCAGCTCCAAGGAGACCAAGGTACTGGACACA
GGAAGCCAGATAGACTCAATCTTCTGGGATTATACTGGCCAATTCCTCTTGACTGGTGGGCCCAGCGGAGTAACT
GTCCAGCAATACTCAAAGGCCTCCAAGGGGTGGTCAGAGCCTCTGCGGAGTGCGGTCCCTGCTACCTCGGTTGCT
TGGGGATCAGCTGCTCAGAGTATTGTGACGTTGAATGAGGCGGGTGTGATCACAGTGCTAGAGGCACAGTCATGA
Gene >Pro_DTO377G3_2|g411.t1
ATGCTTTGTGCTAGTGAGTAGCCTACTATGAATCGCAATTTTGTGCTCTTCTTTCAAGCGAGTTCCTCACTAAAC
CTTTCTCACAGTCTCCGGAGAAGCACCTCAAGTGCCCGTCGTCTCTACCAAGAGCGGTAAGTCTTCGAAATCACC
TTGCGCGCACGACATCAATCTCATAATTAAATAGGCAGCGTATTTGAAAAGCGCCTTATTGAAGCATACATTGCC
GAGCATGGCAAAGATCCCGTGAACGGCGAGGAGCTTACCACCGACGATTTGATCGATCTCAAGTCGCAACGCGTT
GTCCGACCTCGACCCCCTACTCTTACATCCATCCCGTCTCTGCTCAGCGTTTTTCAAGAAGAGTGGGATGCCTTG
GCCCTGGAGACCTTCACTTTGCAGCAGAATTTGGCACAGACAAGGCGCGAGCTAAGTTCGGCACTCTATCAGCAT
GATGCCGCGGTGCGGGTGATTGCGCGCCTGACGCAGGAGAGGGACGAGGCCCGCGAGGCACTTTCGAACGTTTCT
GTTGGTACCACTCGCGCCGGAGGAGAGGCTATGCAAGTGGACTCCACGGGCCTGCCCCAAGCAGTGTTGGAGCGA
ATTGAGAACACACAGGCAGCGTACGTGAATTCGGTGCTTCTCCATCGCATTTCTGGATAGACGACTAATTATTGG
ACAGACTATCAAAGACCCGACGTAAGCGCGCAGTCCCCGAGGGCTGGGCCTCAAGTGAGGCTATTTCCACATTTA
AGCCATCTCAGGTCTCGGAACCTCTCTACCCCGGTGGCCGCGCGTTATCTATCAACCCGACTGGTGACCTGGCTC
TTGTTGGTGGTGTTGACGGCGTGGCTGGTGTCTACTCGCTCTCCCAGAAGAGTGTCGTACAGACCCTCAAGACAG
ATGGCCCAGTCACCGATGCGACATGGGCAGGAAACAAGGCCGTCGTTGCCTCCTCTACGGGCTCCGTCAAGGTCT
TTGAGAATGGCGCTGAAGTTGCAAGCTTCGCCTCCCACTCTGGTGAGGTGACGGCTGTCACAGTCCACGCTACTG
GTGATATTGCTGCTTCTGTTGGTGTCGATAAGAGTTATGTGCTTTATGATCTCGCCACCAACACCGTGGTCTCCC
AAATTTTCTGCGATGCAGGTAAGAAGTCAACCTATGGAACTCATATATCCAAGCGCGATGCTAATCACTTTTGTT
CAGCTCTACTGTCTGTCAACTTCCACCCAGATGGTCACTTGATCGCGGCCGGTGGCGCAGACGGAAAAGTCAAGA
TCTTCGATGTCAAGACCGGCGCCGCTGCTGCGGACTATACGATGTCGGGCCCAGTGAAATGTCTGTTCTTCTCTG
AGAACGGTACTTACCTGGCTGCGGTAGCCGCGCAGTCCACCACTGTATCAATCTGGGATCTCCGCAGCTCCAAGG
AGACCAAGGTACTGGACACAGGAAGCCAGATAGACTCAATCTTCTGGGATTATACTGGCCAATTCCTCTTGACTG
GTGGGCCCAGCGGAGTAACTGTCCAGCAATACTCAAAGGCCTCCAAGGGGTGGTCAGAGCCTCTGCGGAGTGCGG
TCCCTGCTACCTCGGTTGCTTGGGGATCAGCTGCTCAGAGTATTGTGACGTTGAATGAGGCGGGTGTGATCACAG
TGCTAGAGGCACAGTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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