Protein ID | Pro_DTO377G3_2|g4108.t1 |
Gene name | |
Location | scaffold_08:21567..24422 |
Strand | - |
Gene length (bp) | 2855 |
Transcript length (bp) | 2760 |
Coding sequence length (bp) | 2760 |
Protein length (aa) | 920 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02862 | DDHD | DDHD domain | 1.5E-66 | 625 | 906 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 73.22 | 44.68 | 101.75 |
5d_25C | Five days - 25 degrees Celsius | 127.11 | 74.41 | 179.81 |
7d_25C | Seven days - 25 degrees Celsius | 131.00 | 76.84 | 185.16 |
10d_25C | Ten days - 25 degrees Celsius | 192.68 | 110.41 | 274.95 |
7d_15C | Seven days - 15 degrees Celsius | 125.73 | 71.62 | 179.85 |
7d_30C | Seven days - 30 degrees Celsius | 139.41 | 80.58 | 198.25 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.009770 | yes |
3d_25C | 7d_25C | 0.005626 | yes |
3d_25C | 7d_15C | 0.011993 | yes |
3d_25C | 7d_30C | 0.002297 | yes |
3d_25C | 10d_25C | 0.000700 | yes |
5d_25C | 7d_25C | 0.933233 | no |
5d_25C | 7d_15C | 0.976786 | no |
5d_25C | 7d_30C | 0.768835 | no |
5d_25C | 10d_25C | 0.064014 | no |
7d_25C | 7d_15C | 0.909279 | no |
7d_25C | 7d_30C | 0.854326 | no |
7d_25C | 10d_25C | 0.087906 | no |
7d_15C | 7d_30C | 0.744380 | no |
7d_15C | 10d_25C | 0.068260 | no |
7d_30C | 10d_25C | 0.175871 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4108.t1 MAGAEQKSFLGTLTPWSTPKSATSTPQLGDHQKKDVLQRSQGEDHTVTHMHRLSMRRYPPDCPPSKVRWFYAVDS PKRKPSIIGQKKADQKPLPSPKKFIPFPGKDSQSIEAMFQKLSDIEDARQQNPPNDSEPVLTKVPVNEDFLFNVD VEQRELSPTYWIGPVYEVRRGTWFIQDGSSLKPCEENLATQLEEGYIKLCPWRSQPSEQNSQANEEDRSGQMPIN TFEPDPKSPQSINPNSSPRTAGNDSSSPSPTVEPQQYRLFGAYMNRIVGYQDSTTAWLMNDDFMSRFSTSVYQKL GGVPGTKLVRGFEPRKPKETPEAKGPKQKPLGESNPAKGLNEALKEKTEKDTDKSTSSDGFKDYESGSKSTLERQ MSSLAGEPQNPADLEEQARRQEEQEMEESREVDGADREREVDHLVLVTHGIGQRLGLRLESINFIHDVNVLRKTL KTVYKGSPDLQALNSAHPDSDKNCRVQVLPVCWRHLLDFPYRGVRRNRKELDLTDADALEDDAYPSLSDITLESV PAVRNLISDLAMDVLLYQSGYCEHISNIVIQECNRILRLYRKQNPSFKGSVSLCGHSLGSAILFDILCHQPGSNT GQNGASKGMAHESDDSAHPKGSSAFEFDCEEFFCLGSPIALFQMLKGKTIGGYSALGPRNRKNSMDVEIDLDSHG PRHTLSDNAGIISTPRCRDLYNIFHPSDPVSYRVEPLISPAMATLKPQPLPSVKKSLWTTSGQSLSILGSRMGQS VGSLWTNFTTGVASSLLNRSLGLNGDDASSAARTCSKIGDESIHRRSQSGSAQHTPDGSDDHHHTLIESDLETLY DGFQKSRSVHHGESLDPDADTNQDRRLKFEDAKVRALNANGRVDYSIQEGAFDISLIASIASHLTYWGDEDVNHF MLSQMLSRRQRHKRKQKHR* |
Coding | >Pro_DTO377G3_2|g4108.t1 ATGGCGGGTGCAGAGCAGAAGTCGTTCTTGGGGACACTCACTCCATGGAGTACACCAAAAAGCGCAACCTCAACA CCGCAGCTTGGAGATCACCAGAAAAAGGATGTCTTGCAGCGGTCGCAAGGGGAGGACCACACGGTGACCCACATG CATCGATTAAGCATGCGACGCTATCCTCCCGATTGCCCTCCATCGAAAGTCAGGTGGTTCTACGCAGTGGACTCG CCCAAGCGGAAACCGTCCATAATAGGACAGAAAAAGGCGGACCAAAAGCCCTTACCATCGCCGAAGAAATTCATA CCTTTCCCAGGGAAAGACTCTCAGTCTATTGAAGCGATGTTCCAGAAACTCTCAGACATCGAAGATGCCCGCCAA CAGAACCCGCCAAACGACAGCGAACCTGTATTGACCAAAGTGCCTGTGAATGAGGATTTTCTTTTCAATGTCGAT GTGGAACAACGAGAATTGAGTCCTACCTATTGGATTGGTCCTGTGTATGAAGTCCGTCGTGGAACGTGGTTCATT CAGGATGGATCTAGCCTAAAACCATGTGAAGAAAACCTTGCTACCCAACTTGAAGAGGGCTATATCAAATTGTGT CCATGGAGGTCCCAGCCATCAGAACAGAATTCGCAAGCAAACGAAGAAGATAGATCTGGTCAGATGCCAATCAAC ACCTTTGAGCCAGATCCCAAATCCCCTCAATCAATCAACCCGAACTCTTCTCCTCGTACCGCAGGGAATGATTCC AGCAGTCCTAGTCCTACAGTGGAGCCTCAGCAGTATCGTCTCTTTGGCGCTTACATGAATAGGATAGTCGGTTAT CAAGATTCCACGACGGCCTGGCTTATGAACGATGATTTCATGTCACGCTTCAGTACTTCGGTATATCAAAAGCTA GGGGGCGTTCCGGGAACAAAGTTGGTTCGCGGTTTCGAGCCCAGAAAGCCAAAAGAGACACCAGAAGCAAAGGGT CCTAAACAAAAACCACTGGGCGAGTCAAACCCCGCCAAAGGTTTGAATGAGGCCTTGAAAGAAAAGACAGAAAAA GACACAGACAAGTCAACCTCCTCTGATGGGTTCAAGGACTACGAAAGTGGATCGAAATCAACATTAGAACGCCAA ATGTCCTCCCTCGCAGGCGAGCCGCAAAATCCAGCTGACCTCGAGGAACAGGCTCGTAGGCAGGAGGAACAGGAG ATGGAAGAATCAAGGGAAGTGGACGGCGCGGACAGAGAGCGCGAGGTTGATCATCTAGTTCTTGTCACCCACGGA ATTGGCCAGCGACTCGGCTTGCGACTGGAAAGCATCAATTTCATACACGATGTAAATGTGCTTCGCAAGACGCTA AAAACTGTCTACAAAGGTTCACCTGACCTCCAAGCGTTGAACTCGGCGCATCCAGACAGCGATAAGAACTGCCGT GTTCAAGTGCTTCCTGTGTGCTGGCGCCATCTTCTGGACTTTCCTTACCGAGGAGTTCGGCGGAACAGAAAAGAA CTGGATCTTACTGATGCAGACGCTCTCGAGGATGATGCTTACCCCAGCTTGTCCGATATAACACTGGAAAGTGTA CCTGCTGTTCGAAACCTCATTTCAGATTTGGCTATGGATGTACTCTTGTACCAAAGCGGGTACTGTGAACATATC TCCAATATTGTCATCCAAGAATGCAATCGAATCCTCCGGCTGTACCGGAAGCAAAACCCTTCTTTTAAGGGGTCA GTCAGTCTCTGCGGCCATTCGCTTGGAAGTGCGATTCTATTTGACATCTTGTGTCACCAGCCAGGAAGCAATACC GGACAGAATGGTGCCTCCAAGGGAATGGCCCATGAGAGCGACGACTCGGCCCACCCCAAGGGTTCAAGTGCGTTT GAGTTTGACTGCGAAGAGTTTTTCTGTCTGGGATCACCCATTGCACTATTTCAAATGCTTAAGGGTAAGACGATT GGTGGATACTCTGCCTTAGGTCCCCGAAATCGCAAAAATTCCATGGATGTCGAGATCGACTTGGACTCGCATGGT CCTAGACATACGCTCAGCGACAATGCTGGTATCATCTCAACGCCAAGGTGTCGAGATCTCTACAATATCTTCCAT CCCTCTGACCCGGTGAGCTACCGGGTCGAGCCTTTGATATCTCCAGCGATGGCAACCCTGAAGCCTCAGCCTCTA CCTTCGGTGAAGAAAAGCCTCTGGACGACCTCTGGTCAGAGTCTGTCTATTCTCGGTAGCCGCATGGGCCAAAGT GTGGGATCCCTATGGACAAATTTTACCACGGGTGTTGCAAGCAGTTTATTGAATCGCAGCTTGGGTCTGAATGGC GATGACGCCTCATCGGCTGCTCGGACTTGTAGTAAAATAGGTGATGAATCAATCCATAGACGGTCACAGTCAGGC TCAGCTCAGCATACACCCGATGGATCCGACGATCACCATCACACATTGATTGAATCTGATCTAGAAACTCTTTAC GATGGTTTCCAAAAAAGCAGGAGTGTTCATCATGGCGAGAGTCTAGATCCCGATGCCGACACTAACCAGGATCGG AGGCTGAAATTCGAGGACGCAAAAGTGCGTGCCTTGAATGCAAACGGCCGTGTGGACTACAGCATCCAAGAGGGA GCCTTCGATATCTCATTGATAGCCAGCATTGCTAGCCATCTCACCTATTGGGGAGATGAGGATGTCAATCACTTT ATGCTCTCGCAGATGCTTTCTAGAAGACAGAGGCATAAACGAAAACAAAAACATAGATGA |
Transcript | >Pro_DTO377G3_2|g4108.t1 ATGGCGGGTGCAGAGCAGAAGTCGTTCTTGGGGACACTCACTCCATGGAGTACACCAAAAAGCGCAACCTCAACA CCGCAGCTTGGAGATCACCAGAAAAAGGATGTCTTGCAGCGGTCGCAAGGGGAGGACCACACGGTGACCCACATG CATCGATTAAGCATGCGACGCTATCCTCCCGATTGCCCTCCATCGAAAGTCAGGTGGTTCTACGCAGTGGACTCG CCCAAGCGGAAACCGTCCATAATAGGACAGAAAAAGGCGGACCAAAAGCCCTTACCATCGCCGAAGAAATTCATA CCTTTCCCAGGGAAAGACTCTCAGTCTATTGAAGCGATGTTCCAGAAACTCTCAGACATCGAAGATGCCCGCCAA CAGAACCCGCCAAACGACAGCGAACCTGTATTGACCAAAGTGCCTGTGAATGAGGATTTTCTTTTCAATGTCGAT GTGGAACAACGAGAATTGAGTCCTACCTATTGGATTGGTCCTGTGTATGAAGTCCGTCGTGGAACGTGGTTCATT CAGGATGGATCTAGCCTAAAACCATGTGAAGAAAACCTTGCTACCCAACTTGAAGAGGGCTATATCAAATTGTGT CCATGGAGGTCCCAGCCATCAGAACAGAATTCGCAAGCAAACGAAGAAGATAGATCTGGTCAGATGCCAATCAAC ACCTTTGAGCCAGATCCCAAATCCCCTCAATCAATCAACCCGAACTCTTCTCCTCGTACCGCAGGGAATGATTCC AGCAGTCCTAGTCCTACAGTGGAGCCTCAGCAGTATCGTCTCTTTGGCGCTTACATGAATAGGATAGTCGGTTAT CAAGATTCCACGACGGCCTGGCTTATGAACGATGATTTCATGTCACGCTTCAGTACTTCGGTATATCAAAAGCTA GGGGGCGTTCCGGGAACAAAGTTGGTTCGCGGTTTCGAGCCCAGAAAGCCAAAAGAGACACCAGAAGCAAAGGGT CCTAAACAAAAACCACTGGGCGAGTCAAACCCCGCCAAAGGTTTGAATGAGGCCTTGAAAGAAAAGACAGAAAAA GACACAGACAAGTCAACCTCCTCTGATGGGTTCAAGGACTACGAAAGTGGATCGAAATCAACATTAGAACGCCAA ATGTCCTCCCTCGCAGGCGAGCCGCAAAATCCAGCTGACCTCGAGGAACAGGCTCGTAGGCAGGAGGAACAGGAG ATGGAAGAATCAAGGGAAGTGGACGGCGCGGACAGAGAGCGCGAGGTTGATCATCTAGTTCTTGTCACCCACGGA ATTGGCCAGCGACTCGGCTTGCGACTGGAAAGCATCAATTTCATACACGATGTAAATGTGCTTCGCAAGACGCTA AAAACTGTCTACAAAGGTTCACCTGACCTCCAAGCGTTGAACTCGGCGCATCCAGACAGCGATAAGAACTGCCGT GTTCAAGTGCTTCCTGTGTGCTGGCGCCATCTTCTGGACTTTCCTTACCGAGGAGTTCGGCGGAACAGAAAAGAA CTGGATCTTACTGATGCAGACGCTCTCGAGGATGATGCTTACCCCAGCTTGTCCGATATAACACTGGAAAGTGTA CCTGCTGTTCGAAACCTCATTTCAGATTTGGCTATGGATGTACTCTTGTACCAAAGCGGGTACTGTGAACATATC TCCAATATTGTCATCCAAGAATGCAATCGAATCCTCCGGCTGTACCGGAAGCAAAACCCTTCTTTTAAGGGGTCA GTCAGTCTCTGCGGCCATTCGCTTGGAAGTGCGATTCTATTTGACATCTTGTGTCACCAGCCAGGAAGCAATACC GGACAGAATGGTGCCTCCAAGGGAATGGCCCATGAGAGCGACGACTCGGCCCACCCCAAGGGTTCAAGTGCGTTT GAGTTTGACTGCGAAGAGTTTTTCTGTCTGGGATCACCCATTGCACTATTTCAAATGCTTAAGGGTAAGACGATT GGTGGATACTCTGCCTTAGGTCCCCGAAATCGCAAAAATTCCATGGATGTCGAGATCGACTTGGACTCGCATGGT CCTAGACATACGCTCAGCGACAATGCTGGTATCATCTCAACGCCAAGGTGTCGAGATCTCTACAATATCTTCCAT CCCTCTGACCCGGTGAGCTACCGGGTCGAGCCTTTGATATCTCCAGCGATGGCAACCCTGAAGCCTCAGCCTCTA CCTTCGGTGAAGAAAAGCCTCTGGACGACCTCTGGTCAGAGTCTGTCTATTCTCGGTAGCCGCATGGGCCAAAGT GTGGGATCCCTATGGACAAATTTTACCACGGGTGTTGCAAGCAGTTTATTGAATCGCAGCTTGGGTCTGAATGGC GATGACGCCTCATCGGCTGCTCGGACTTGTAGTAAAATAGGTGATGAATCAATCCATAGACGGTCACAGTCAGGC TCAGCTCAGCATACACCCGATGGATCCGACGATCACCATCACACATTGATTGAATCTGATCTAGAAACTCTTTAC GATGGTTTCCAAAAAAGCAGGAGTGTTCATCATGGCGAGAGTCTAGATCCCGATGCCGACACTAACCAGGATCGG AGGCTGAAATTCGAGGACGCAAAAGTGCGTGCCTTGAATGCAAACGGCCGTGTGGACTACAGCATCCAAGAGGGA GCCTTCGATATCTCATTGATAGCCAGCATTGCTAGCCATCTCACCTATTGGGGAGATGAGGATGTCAATCACTTT ATGCTCTCGCAGATGCTTTCTAGAAGACAGAGGCATAAACGAAAACAAAAACATAGATGA |
Gene | >Pro_DTO377G3_2|g4108.t1 ATGGCGGGTGCAGAGCAGAAGTCGTTCTTGGGGACACTCACTCCATGGAGTACACCAAAAAGCGCAACCTCAACA CCGCAGCTTGGAGATCACCAGAAAAAGGATGTCTTGCAGCGGTCGCAAGGGGAGGACCACACGGTGACCCACATG CATCGATTAAGCATGCGACGCTATCCTCCCGATTGCCCTCCATCGAAAGTCAGGTGGTTCTACGCAGTGGACTCG CCCAAGCGGAAACCGTCCATAATAGGACAGAAAAAGGCGGACCAAAAGCCCTTACCATCGCCGAAGAAATTCATA CCTTTCCCAGGGAAAGACTCTCAGTCTATTGAAGCGATGTTCCAGAAACTCTCAGACATCGAAGATGCCCGCCAA CAGAACCCGCCAAACGACAGCGAACCTGTATTGACCAAAGTGCCTGTGAATGAGGATTTTCTTTTCAATGTCGAT GTGGAACAACGAGAATTGAGTCCTACCTATTGGATTGGTCCTGTGTATGAAGTCCGTCGTGGAACGTGGTTCATT CAGGATGGATCTAGCCTAAAACCATGTGAAGAAAACCTTGCTACCCAACTTGAAGAGGGCTATATCAAATTGTGT CCATGGAGGTCCCAGCCATCAGAACAGAATTCGCAAGCAAACGAAGAAGATAGATCTGGTCAGATGCCAATCAAC ACCTTTGAGCCAGATCCCAAATCCCCTCAATCAATCAACCCGAACTCTTCTCCTCGTACCGCAGGGAATGATTCC AGCAGTCCTAGTCCTACAGTGGAGCCTCAGCAGTATCGTCTCTTTGGCGCTTACATGAATAGGATAGTCGGTTAT CAAGATTCCACGACGGCCTGGCTTATGAACGATGATTTCATGTCACGCTTCAGTACTTCGGTATATCAAAAGCTA GGGGGCGTTCCGGGAACAAAGTTGGTTCGCGGTTTCGAGCCCAGAAAGCCAAAAGAGACACCAGAAGCAAAGGGT CCTAAACAAAAACCACTGGGCGAGTCAAACCCCGCCAAAGGTTTGAATGAGGCCTTGAAAGAAAAGACAGAAAAA GACACAGACAAGTCAACCTCCTCTGATGGGTTCAAGGACTACGAAAGTGGATCGAAATCAACATTAGAACGCCAA ATGTCCTCCCTCGCAGGCGAGCCGCAAAATCCAGCTGACCTCGAGGAACAGGCTCGTAGGCAGGAGGAACAGGAG ATGGAAGAATCAAGGGAAGTGGACGGCGCGGACAGAGAGCGCGAGGTTGATCATCTAGTTCTTGTCACCCACGGA ATTGGCCAGCGACTCGGCTTGCGACTGGAAAGCATCAATTTCATACACGATGTAAATGTGCTTCGCAAGACGCTA AAAACTGTCTACAAAGGTTCACCTGACCTCCAAGCGTTGAACTCGGCGCATCCAGACAGCGATAAGAACTGCCGT GTTCAAGTGCTTCCTGTGTGAGACTGATTCCTTTGCTCGGCATTTCTTTTTGCTAATTTCAGCAGGTGCTGGCGC CATCTTCTGGACTTTCCTTACCGAGGAGTTCGGCGGAACAGAAAAGAACTGGATCTTACTGATGCAGACGCTCTC GAGGATGATGCTTACCCCAGCTTGTCCGATATAACACTGGAAAGTGTACCTGCTGTTCGAAACCTCATTTCAGAT TTGGCTATGGATGTACTCTTGTACCAAAGCGGGTACTGTGAACATATCTCCAATATTGTCATCCAAGAATGCAAT CGAATCCTCCGGCTGTACCGGAAGCAAAACCCTTCTTTTAAGGGGTCAGTCAGTCTCTGCGGCCATTCGCTTGGA AGTGCGATTCTATTTGACATCTTGTGTCACCAGCCAGGAAGCAATACCGGACAGAATGGTGCCTCCAAGGGAATG GCCCATGAGAGCGACGACTCGGCCCACCCCAAGGGTTCAAGTGCGTTTGAGTTTGACTGCGAAGAGTTTTTCTGT CTGGGATCACCCATTGCACTATTTCAAATGCTTAAGGGTAAGACGATTGGTGGATACTCTGCCTTAGGTCCCCGA AATCGCAAAAATTCCATGGATGTCGAGATCGACTTGGACTCGCATGGTCCTAGACATACGCTCAGCGACAATGCT GGTATCATCTCAACGCCAAGGTGTCGAGATCTCTACAATATCTTCCATCCCTCTGACCCGGTGAGCTACCGGGTC GAGCCTTTGATATCTCCAGCGATGGCAACCCTGAAGCCTCAGCCTCTACCTTCGGTGAAGAAAAGCCTCTGGACG ACCTCTGGTCAGAGTCTGTCTATTCTCGGTAGCCGCATGGGCCAAAGTGTGGGATCCCTATGGACAAATTTTACC ACGGGTGTTGCAAGCAGTTTATTGAATCGCAGCTTGGGTCTGAATGGCGATGACGCCTCATCGGCTGCTCGGACT TGTAGTAAAATAGGTGATGAATCAATCCATAGACGGTCACAGTCAGGCTCAGCTCAGCATACACCCGATGGATCC GACGATCACCATCACACATTGATTGAATCTGATCTAGAAACTCTTTACGATGGTTTCCAAAAAAGCAGGAGTGTT CATCATGGCGAGAGTCTAGATCCCGATGCCGACACTAACCAGGATCGGAGGCTGAAATTCGAGGACGCAAAAGTG CGTGCCTTGAATGCAAACGGCCGTGTGGACTACAGCATCCAAGAGTAAGACTATATGCCCTGCATTGTTGAACCT TGTTGACGGAATATAGGGGAGCCTTCGATATCTCATTGATAGCCAGCATTGCTAGCCATCTCACCTATTGGGGAG ATGAGGATGTCAATCACTTTATGCTCTCGCAGATGCTTTCTAGAAGACAGAGGCATAAACGAAAACAAAAACATA GATGA |