Protein ID | Pro_DTO377G3_2|g4107.t1 |
Gene name | |
Location | scaffold_08:17824..20711 |
Strand | - |
Gene length (bp) | 2887 |
Transcript length (bp) | 2823 |
Coding sequence length (bp) | 2823 |
Protein length (aa) | 941 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02194 | PXA | PXA domain | 2.6E-34 | 157 | 333 |
PF08628 | Nexin_C | Sorting nexin C terminal | 3.0E-22 | 804 | 920 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 31 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 53 | 75 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4107.t1 MSRLSDDDSEVISAPSDKDHNTPTTKDPILNTAISKELINAILNFLSTSTNETLLGVFALLALVTYIVLGRIGLL LIGVAVGVVLHASWEGSDNEHGEEASHVQKPNRRRELALEVSNRLLDWPRRAGASDIQGDDGSINTLEDMSSADL EYATFQPATAVALRTLTDAVIQDYVKYWYEPLLPSEPSFPDSCRRILTHFITSVSSHLSRKRTEDTFLQFLTNSS SIVIVFLNELAAAFTAASSSPTEAQKTVDQYLEQFPDSSLANVLSAEQQKKKLSMIADDILSNFLDAKTYNYPAV RDFLREVFAGVILGSTVTSLARPEFINEWIIYLLQGGESEIMHAIDAGVEGARNQGVSAPRSSEHPKADSVKATQ RDSMHVARATEEEAVLEVKRLSAMIVSHDTQNSESERTRQNEQFDENYPLNTDLASDTTDENENHEDQGPIPNTQ SLASPKSFEDSSVPPLILHGAQVLVDDDGARDEKGQIKSRPVWDYLLQVEPASTRSTGWMVFRKYSDFQSLHEIL GTVSRLNQISSFSERHPILPTWKGKTRLALARDLGWYLQDAMKHESLADTDRMRRFLQKDAGASTQPSCNNKPGF SFPSQIAFEHMGKGMLGALTNAPRGVAGGGKAVFEGMTGVFGGTANGKKPAVGADQIQPKVDDSSRAIRSQTRFS FADRTDVSNENVDSPMVFPSDPLEIQGGEISKSSSVGSTRESFESERGAWTTEISPSKTSLDISDHTAELDVRAT ETIDQTSSHRRSDTGQSIDKPRNQGNPITADETKIAVELIFAVINELYTLSSAWNIRRTLLNAAKSYILRPGSPT LETIRTLLQDSMIEGHTSDDALGYYLVKLRENALPTEEELKAWPSPPSEEEKIRLRDTARKLFVQRGIPQALTSV MGAAASREALEKIFDSLQVESVARGFVFSILLQGLRVLTL* |
Coding | >Pro_DTO377G3_2|g4107.t1 ATGAGTCGCCTCAGTGATGACGACTCCGAAGTCATTTCAGCTCCATCCGACAAAGACCACAATACTCCCACGACG AAAGATCCCATCTTAAATACAGCGATCTCAAAGGAACTCATCAATGCTATCCTCAATTTTCTCTCAACCTCTACC AATGAGACCCTCCTTGGAGTCTTTGCGCTTCTTGCACTCGTCACCTATATTGTCCTGGGGAGAATCGGTCTACTT CTGATTGGAGTGGCTGTGGGGGTTGTCCTACACGCGTCCTGGGAGGGATCAGATAACGAACACGGAGAAGAAGCG TCCCACGTGCAAAAGCCCAACCGGCGTAGAGAACTTGCCCTGGAAGTCTCCAACAGACTTTTAGACTGGCCGAGG CGGGCTGGTGCTTCAGACATCCAGGGGGACGATGGTTCTATAAACACGCTGGAAGATATGTCTTCGGCAGACTTG GAGTATGCCACCTTCCAACCGGCCACCGCTGTCGCGCTGAGAACGCTCACCGATGCTGTCATTCAAGATTATGTC AAATACTGGTATGAGCCACTTTTACCGTCCGAGCCAAGTTTTCCAGACTCCTGTCGAAGGATTTTGACTCATTTC ATTACTTCAGTTTCTTCGCACCTCTCGCGGAAACGAACAGAGGACACGTTCTTGCAGTTTCTCACCAACTCCTCA TCTATCGTCATTGTATTCTTGAATGAACTTGCAGCAGCATTCACTGCTGCGAGCTCATCCCCGACGGAAGCCCAA AAAACCGTGGACCAATACCTTGAACAATTCCCGGATAGCAGCCTAGCGAATGTCTTGTCTGCGGAACAACAAAAG AAAAAACTCAGCATGATCGCGGATGACATACTGTCGAATTTCTTGGATGCCAAAACCTACAATTATCCGGCTGTA CGGGACTTCCTCCGTGAGGTCTTTGCGGGCGTGATATTGGGGTCAACTGTTACCAGTCTTGCCCGTCCTGAATTT ATCAATGAATGGATTATCTATCTTCTTCAGGGCGGTGAATCCGAAATTATGCACGCTATCGACGCAGGCGTTGAG GGTGCACGGAACCAGGGTGTCAGTGCTCCTAGGTCTTCAGAACACCCAAAGGCAGACTCCGTCAAAGCCACACAG AGAGATTCCATGCATGTAGCGAGGGCTACAGAGGAAGAGGCGGTTCTAGAGGTGAAACGTCTGAGTGCTATGATT GTATCCCACGATACACAGAACTCGGAGTCAGAACGGACGCGCCAAAACGAACAATTTGACGAAAATTACCCTTTG AACACTGATTTGGCTTCAGACACGACTGATGAGAACGAAAACCACGAAGACCAGGGGCCGATACCTAATACGCAA TCACTTGCAAGCCCGAAATCATTCGAAGACTCTTCTGTGCCACCTTTGATTCTTCATGGGGCACAAGTGTTGGTA GATGATGATGGAGCAAGGGATGAAAAAGGCCAAATCAAGTCGCGACCCGTGTGGGATTATCTGCTACAGGTCGAA CCAGCGTCAACACGCTCGACTGGATGGATGGTGTTTCGCAAATATTCGGACTTCCAATCTCTTCACGAGATACTG GGGACCGTTTCACGATTGAATCAGATTTCGAGTTTCTCGGAGCGTCACCCCATACTGCCCACTTGGAAGGGCAAA ACACGACTAGCTCTCGCTCGGGACCTTGGGTGGTATTTACAAGATGCCATGAAGCACGAGTCACTTGCCGACACT GATCGAATGCGGCGATTTTTGCAAAAAGACGCTGGTGCTTCCACTCAACCTAGCTGTAACAACAAACCGGGATTC TCTTTCCCTAGTCAAATTGCGTTTGAACACATGGGCAAGGGTATGCTGGGTGCATTGACCAATGCGCCCAGGGGA GTGGCAGGGGGCGGTAAAGCCGTCTTTGAAGGAATGACAGGGGTGTTTGGCGGCACCGCCAATGGCAAGAAACCG GCTGTCGGTGCTGATCAGATTCAACCCAAAGTTGATGACTCCAGTCGCGCCATCCGGTCGCAGACACGGTTTAGC TTTGCTGATCGTACCGACGTAAGCAACGAAAACGTTGATTCGCCTATGGTGTTCCCTAGCGACCCCCTGGAAATC CAAGGAGGCGAAATTTCCAAGTCGTCTTCGGTTGGCAGTACCAGAGAGTCGTTTGAGAGTGAACGGGGTGCATGG ACCACAGAGATCTCACCCTCTAAAACCTCACTTGATATCAGCGATCATACTGCAGAACTTGATGTCCGGGCAACG GAAACTATTGATCAAACCTCATCACATCGCCGATCAGATACTGGGCAGAGTATTGATAAACCCCGCAATCAGGGG AATCCCATCACAGCTGATGAGACGAAAATAGCAGTAGAGCTGATCTTTGCGGTCATCAATGAGTTGTACACCTTG TCGTCTGCGTGGAACATACGCCGGACCCTTCTGAATGCTGCCAAATCGTATATTCTACGTCCCGGCAGCCCGACA TTGGAAACTATTCGTACGCTGTTGCAAGATTCCATGATAGAAGGCCACACTTCGGACGACGCCCTGGGGTATTAC CTCGTCAAGCTTCGTGAGAACGCGCTTCCGACAGAGGAGGAACTTAAAGCCTGGCCCTCTCCACCCAGTGAGGAG GAGAAGATCCGATTACGGGATACTGCACGTAAACTATTTGTGCAGCGGGGAATTCCACAGGCCTTAACAAGTGTT ATGGGGGCAGCTGCTAGTCGAGAAGCGCTAGAGAAGATCTTTGATAGTCTTCAAGTTGAGAGTGTCGCTCGAGGA TTTGTCTTCTCGATTTTACTACAGGGCCTTAGAGTATTGACTCTTTAA |
Transcript | >Pro_DTO377G3_2|g4107.t1 ATGAGTCGCCTCAGTGATGACGACTCCGAAGTCATTTCAGCTCCATCCGACAAAGACCACAATACTCCCACGACG AAAGATCCCATCTTAAATACAGCGATCTCAAAGGAACTCATCAATGCTATCCTCAATTTTCTCTCAACCTCTACC AATGAGACCCTCCTTGGAGTCTTTGCGCTTCTTGCACTCGTCACCTATATTGTCCTGGGGAGAATCGGTCTACTT CTGATTGGAGTGGCTGTGGGGGTTGTCCTACACGCGTCCTGGGAGGGATCAGATAACGAACACGGAGAAGAAGCG TCCCACGTGCAAAAGCCCAACCGGCGTAGAGAACTTGCCCTGGAAGTCTCCAACAGACTTTTAGACTGGCCGAGG CGGGCTGGTGCTTCAGACATCCAGGGGGACGATGGTTCTATAAACACGCTGGAAGATATGTCTTCGGCAGACTTG GAGTATGCCACCTTCCAACCGGCCACCGCTGTCGCGCTGAGAACGCTCACCGATGCTGTCATTCAAGATTATGTC AAATACTGGTATGAGCCACTTTTACCGTCCGAGCCAAGTTTTCCAGACTCCTGTCGAAGGATTTTGACTCATTTC ATTACTTCAGTTTCTTCGCACCTCTCGCGGAAACGAACAGAGGACACGTTCTTGCAGTTTCTCACCAACTCCTCA TCTATCGTCATTGTATTCTTGAATGAACTTGCAGCAGCATTCACTGCTGCGAGCTCATCCCCGACGGAAGCCCAA AAAACCGTGGACCAATACCTTGAACAATTCCCGGATAGCAGCCTAGCGAATGTCTTGTCTGCGGAACAACAAAAG AAAAAACTCAGCATGATCGCGGATGACATACTGTCGAATTTCTTGGATGCCAAAACCTACAATTATCCGGCTGTA CGGGACTTCCTCCGTGAGGTCTTTGCGGGCGTGATATTGGGGTCAACTGTTACCAGTCTTGCCCGTCCTGAATTT ATCAATGAATGGATTATCTATCTTCTTCAGGGCGGTGAATCCGAAATTATGCACGCTATCGACGCAGGCGTTGAG GGTGCACGGAACCAGGGTGTCAGTGCTCCTAGGTCTTCAGAACACCCAAAGGCAGACTCCGTCAAAGCCACACAG AGAGATTCCATGCATGTAGCGAGGGCTACAGAGGAAGAGGCGGTTCTAGAGGTGAAACGTCTGAGTGCTATGATT GTATCCCACGATACACAGAACTCGGAGTCAGAACGGACGCGCCAAAACGAACAATTTGACGAAAATTACCCTTTG AACACTGATTTGGCTTCAGACACGACTGATGAGAACGAAAACCACGAAGACCAGGGGCCGATACCTAATACGCAA TCACTTGCAAGCCCGAAATCATTCGAAGACTCTTCTGTGCCACCTTTGATTCTTCATGGGGCACAAGTGTTGGTA GATGATGATGGAGCAAGGGATGAAAAAGGCCAAATCAAGTCGCGACCCGTGTGGGATTATCTGCTACAGGTCGAA CCAGCGTCAACACGCTCGACTGGATGGATGGTGTTTCGCAAATATTCGGACTTCCAATCTCTTCACGAGATACTG GGGACCGTTTCACGATTGAATCAGATTTCGAGTTTCTCGGAGCGTCACCCCATACTGCCCACTTGGAAGGGCAAA ACACGACTAGCTCTCGCTCGGGACCTTGGGTGGTATTTACAAGATGCCATGAAGCACGAGTCACTTGCCGACACT GATCGAATGCGGCGATTTTTGCAAAAAGACGCTGGTGCTTCCACTCAACCTAGCTGTAACAACAAACCGGGATTC TCTTTCCCTAGTCAAATTGCGTTTGAACACATGGGCAAGGGTATGCTGGGTGCATTGACCAATGCGCCCAGGGGA GTGGCAGGGGGCGGTAAAGCCGTCTTTGAAGGAATGACAGGGGTGTTTGGCGGCACCGCCAATGGCAAGAAACCG GCTGTCGGTGCTGATCAGATTCAACCCAAAGTTGATGACTCCAGTCGCGCCATCCGGTCGCAGACACGGTTTAGC TTTGCTGATCGTACCGACGTAAGCAACGAAAACGTTGATTCGCCTATGGTGTTCCCTAGCGACCCCCTGGAAATC CAAGGAGGCGAAATTTCCAAGTCGTCTTCGGTTGGCAGTACCAGAGAGTCGTTTGAGAGTGAACGGGGTGCATGG ACCACAGAGATCTCACCCTCTAAAACCTCACTTGATATCAGCGATCATACTGCAGAACTTGATGTCCGGGCAACG GAAACTATTGATCAAACCTCATCACATCGCCGATCAGATACTGGGCAGAGTATTGATAAACCCCGCAATCAGGGG AATCCCATCACAGCTGATGAGACGAAAATAGCAGTAGAGCTGATCTTTGCGGTCATCAATGAGTTGTACACCTTG TCGTCTGCGTGGAACATACGCCGGACCCTTCTGAATGCTGCCAAATCGTATATTCTACGTCCCGGCAGCCCGACA TTGGAAACTATTCGTACGCTGTTGCAAGATTCCATGATAGAAGGCCACACTTCGGACGACGCCCTGGGGTATTAC CTCGTCAAGCTTCGTGAGAACGCGCTTCCGACAGAGGAGGAACTTAAAGCCTGGCCCTCTCCACCCAGTGAGGAG GAGAAGATCCGATTACGGGATACTGCACGTAAACTATTTGTGCAGCGGGGAATTCCACAGGCCTTAACAAGTGTT ATGGGGGCAGCTGCTAGTCGAGAAGCGCTAGAGAAGATCTTTGATAGTCTTCAAGTTGAGAGTGTCGCTCGAGGA TTTGTCTTCTCGATTTTACTACAGGGCCTTAGAGTATTGACTCTTTAA |
Gene | >Pro_DTO377G3_2|g4107.t1 ATGAGTCGCCTCAGTGATGACGACTCCGAAGTCATTTCAGCTCCATCCGACAAAGACCACAATACTCCCACGACG AAAGATCCCATCTTAAATACAGCGATCTCAAAGGAACTCATCAATGCTATCCTCAATTTTCTCTCAACCTCTACC AATGAGACCCTCCTTGGAGTCTTTGCGCTTCTTGCACTCGTCACCTATATTGTCCTGGGGAGAATCGGTCTACTT CTGATTGGAGTGGCTGTGGGGGTTGTCCTACACGCGTCCTGGGAGGGATCAGATAACGAACACGGAGAAGAAGCG TCCCACGTGCAAAAGCCCAACCGGCGTAGAGAACTTGCCCTGGAAGTCTCCAACAGACTTTTAGACTGGCCGAGG CGGGCTGGTGCTTCAGACATCCAGGGGGACGATGGTTCTATAAACACGCTGGAAGATATGTCTTCGGCAGACTTG GAGTATGCCACCTTCCAACCGGCCACCGCTGTCGCGCTGAGAACGCTCACCGATGCTGTCATTCAAGATTATGTC AAGTAAGTATCCTCTATTAACGTCCCCTTGTCCAACCGTGAAACAAGTAGCTTATCCCAAATAAAGATACTGGTA TGAGCCACTTTTACCGTCCGAGCCAAGTTTTCCAGACTCCTGTCGAAGGATTTTGACTCATTTCATTACTTCAGT TTCTTCGCACCTCTCGCGGAAACGAACAGAGGACACGTTCTTGCAGTTTCTCACCAACTCCTCATCTATCGTCAT TGTATTCTTGAATGAACTTGCAGCAGCATTCACTGCTGCGAGCTCATCCCCGACGGAAGCCCAAAAAACCGTGGA CCAATACCTTGAACAATTCCCGGATAGCAGCCTAGCGAATGTCTTGTCTGCGGAACAACAAAAGAAAAAACTCAG CATGATCGCGGATGACATACTGTCGAATTTCTTGGATGCCAAAACCTACAATTATCCGGCTGTACGGGACTTCCT CCGTGAGGTCTTTGCGGGCGTGATATTGGGGTCAACTGTTACCAGTCTTGCCCGTCCTGAATTTATCAATGAATG GATTATCTATCTTCTTCAGGGCGGTGAATCCGAAATTATGCACGCTATCGACGCAGGCGTTGAGGGTGCACGGAA CCAGGGTGTCAGTGCTCCTAGGTCTTCAGAACACCCAAAGGCAGACTCCGTCAAAGCCACACAGAGAGATTCCAT GCATGTAGCGAGGGCTACAGAGGAAGAGGCGGTTCTAGAGGTGAAACGTCTGAGTGCTATGATTGTATCCCACGA TACACAGAACTCGGAGTCAGAACGGACGCGCCAAAACGAACAATTTGACGAAAATTACCCTTTGAACACTGATTT GGCTTCAGACACGACTGATGAGAACGAAAACCACGAAGACCAGGGGCCGATACCTAATACGCAATCACTTGCAAG CCCGAAATCATTCGAAGACTCTTCTGTGCCACCTTTGATTCTTCATGGGGCACAAGTGTTGGTAGATGATGATGG AGCAAGGGATGAAAAAGGCCAAATCAAGTCGCGACCCGTGTGGGATTATCTGCTACAGGTCGAACCAGCGTCAAC ACGCTCGACTGGATGGATGGTGTTTCGCAAATATTCGGACTTCCAATCTCTTCACGAGATACTGGGGACCGTTTC ACGATTGAATCAGATTTCGAGTTTCTCGGAGCGTCACCCCATACTGCCCACTTGGAAGGGCAAAACACGACTAGC TCTCGCTCGGGACCTTGGGTGGTATTTACAAGATGCCATGAAGCACGAGTCACTTGCCGACACTGATCGAATGCG GCGATTTTTGCAAAAAGACGCTGGTGCTTCCACTCAACCTAGCTGTAACAACAAACCGGGATTCTCTTTCCCTAG TCAAATTGCGTTTGAACACATGGGCAAGGGTATGCTGGGTGCATTGACCAATGCGCCCAGGGGAGTGGCAGGGGG CGGTAAAGCCGTCTTTGAAGGAATGACAGGGGTGTTTGGCGGCACCGCCAATGGCAAGAAACCGGCTGTCGGTGC TGATCAGATTCAACCCAAAGTTGATGACTCCAGTCGCGCCATCCGGTCGCAGACACGGTTTAGCTTTGCTGATCG TACCGACGTAAGCAACGAAAACGTTGATTCGCCTATGGTGTTCCCTAGCGACCCCCTGGAAATCCAAGGAGGCGA AATTTCCAAGTCGTCTTCGGTTGGCAGTACCAGAGAGTCGTTTGAGAGTGAACGGGGTGCATGGACCACAGAGAT CTCACCCTCTAAAACCTCACTTGATATCAGCGATCATACTGCAGAACTTGATGTCCGGGCAACGGAAACTATTGA TCAAACCTCATCACATCGCCGATCAGATACTGGGCAGAGTATTGATAAACCCCGCAATCAGGGGAATCCCATCAC AGCTGATGAGACGAAAATAGCAGTAGAGCTGATCTTTGCGGTCATCAATGAGTTGTACACCTTGTCGTCTGCGTG GAACATACGCCGGACCCTTCTGAATGCTGCCAAATCGTATATTCTACGTCCCGGCAGCCCGACATTGGAAACTAT TCGTACGCTGTTGCAAGATTCCATGATAGAAGGCCACACTTCGGACGACGCCCTGGGGTATTACCTCGTCAAGCT TCGTGAGAACGCGCTTCCGACAGAGGAGGAACTTAAAGCCTGGCCCTCTCCACCCAGTGAGGAGGAGAAGATCCG ATTACGGGATACTGCACGTAAACTATTTGTGCAGCGGGGAATTCCACAGGCCTTAACAAGTGTTATGGGGGCAGC TGCTAGTCGAGAAGCGCTAGAGAAGATCTTTGATAGTCTTCAAGTTGAGAGTGTCGCTCGAGGATTTGTCTTCTC GATTTTACTACAGGGCCTTAGAGTATTGACTCTTTAA |