Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4082.t1
Gene name
Locationscaffold_07:758784..759690
Strand+
Gene length (bp)906
Transcript length (bp)648
Coding sequence length (bp)648
Protein length (aa) 216

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05529 Bap31 Bap31/Bap29 transmembrane region 2.6E-51 1 139
PF18035 Bap31_Bap29_C Bap31/Bap29 cytoplasmic coiled-coil domain 1.0E-13 164 214

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 63 19
3 108 130 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4082.t1
MTLYYSLVFLLLVFEMGVFLALVIPLPHVVKRKLFAFISESPIIAKLQYGLKITFIFILILFIDSVNRVYRVQQE
LSAFAKDGPGMGAAHLGTDRMEVQARKFYSQRNMYLCGFTLFLSLILNRTYTMILETLRLEDRVRLIEGDKKAGG
KDSARIAEAGSVGEIGRLKEIIATKNRDIETLKKQCEGLTREYHSLGDQISNEKGDKNEKDKKDL*
Coding >Pro_DTO377G3_2|g4082.t1
ATGACTCTCTACTACTCCCTTGTATTCCTCCTTCTGGTGTTCGAGATGGGTGTATTCCTGGCCCTCGTCATCCCT
CTCCCTCATGTCGTTAAGCGCAAGCTGTTTGCCTTCATCTCGGAGAGCCCGATCATAGCCAAATTACAATATGGA
CTGAAGATTACATTCATCTTCATCCTCATTCTGTTCATCGACTCCGTGAACCGTGTGTACCGTGTGCAGCAGGAG
CTGTCCGCCTTCGCCAAGGACGGTCCCGGCATGGGAGCCGCCCACCTCGGTACCGACCGCATGGAGGTCCAGGCC
CGCAAGTTCTACTCGCAGCGCAACATGTATCTCTGTGGATTCACTCTGTTCCTCTCCCTGATCCTCAACCGCACC
TATACCATGATTCTCGAGACTCTCCGCCTTGAGGACCGCGTCCGTCTCATCGAGGGCGACAAGAAGGCCGGTGGA
AAGGACTCAGCCCGTATCGCGGAGGCTGGTTCAGTCGGCGAGATCGGTCGTCTTAAGGAGATCATTGCCACCAAG
AACCGGGATATTGAGACTCTCAAGAAGCAGTGTGAGGGTCTGACCCGCGAGTACCACAGCCTGGGTGACCAGATT
TCCAACGAAAAGGGTGATAAGAACGAGAAGGACAAGAAAGACCTGTAA
Transcript >Pro_DTO377G3_2|g4082.t1
ATGACTCTCTACTACTCCCTTGTATTCCTCCTTCTGGTGTTCGAGATGGGTGTATTCCTGGCCCTCGTCATCCCT
CTCCCTCATGTCGTTAAGCGCAAGCTGTTTGCCTTCATCTCGGAGAGCCCGATCATAGCCAAATTACAATATGGA
CTGAAGATTACATTCATCTTCATCCTCATTCTGTTCATCGACTCCGTGAACCGTGTGTACCGTGTGCAGCAGGAG
CTGTCCGCCTTCGCCAAGGACGGTCCCGGCATGGGAGCCGCCCACCTCGGTACCGACCGCATGGAGGTCCAGGCC
CGCAAGTTCTACTCGCAGCGCAACATGTATCTCTGTGGATTCACTCTGTTCCTCTCCCTGATCCTCAACCGCACC
TATACCATGATTCTCGAGACTCTCCGCCTTGAGGACCGCGTCCGTCTCATCGAGGGCGACAAGAAGGCCGGTGGA
AAGGACTCAGCCCGTATCGCGGAGGCTGGTTCAGTCGGCGAGATCGGTCGTCTTAAGGAGATCATTGCCACCAAG
AACCGGGATATTGAGACTCTCAAGAAGCAGTGTGAGGGTCTGACCCGCGAGTACCACAGCCTGGGTGACCAGATT
TCCAACGAAAAGGGTGATAAGAACGAGAAGGACAAGAAAGACCTGTAA
Gene >Pro_DTO377G3_2|g4082.t1
ATGACTCTCTACTACTCCCTTGTAAGCCTGACAAGTTCCTTCTCTAGTTGCTTCTTGTTGTGTTTCTCAAGAAGT
TCTCGAGAATCGTTGCAGCCTGATGCCCGAAACTGTCTACCCAGCCCAAGCGTCTCCACCCTATCGATGAACTAA
CACAATGCCCTCATATAGGTATTCCTCCTTCTGGTGTTCGAGATGGGTGTATTCCTGGCCCTCGTCATCCCTCTC
CCTCATGTCGTTAAGCGCAAGCTGTTTGCCTTCATCTCGGAGAGCCCGATCATAGCCAAATTACAATATGGACTG
AAGGTATATTGCCAATTTGAAACCACGTTTCCGGTTACACTGCTAAACTGGCCTCCAGATTACATTCATCTTCAT
CCTCATTCTGTTCATCGACTCCGTGAACCGTGTGTACCGTGTGCAGCAGGAGCTGTCCGCCTTCGCCAAGGACGG
TCCCGGCATGGGGTAAGTAATCAATCCTCAGGCATTCTAGCAAAATTTCTAACCATTGTTACCAACAGAGCCGCC
CACCTCGGTACCGACCGCATGGAGGTCCAGGCCCGCAAGTTCTACTCGCAGCGCAACATGTATCTCTGTGGATTC
ACTCTGTTCCTCTCCCTGATCCTCAACCGCACCTATACCATGATTCTCGAGACTCTCCGCCTTGAGGACCGCGTC
CGTCTCATCGAGGGCGACAAGAAGGCCGGTGGAAAGGACTCAGCCCGTATCGCGGAGGCTGGTTCAGTCGGCGAG
ATCGGTCGTCTTAAGGAGATCATTGCCACCAAGAACCGGGATATTGAGACTCTCAAGAAGCAGTGTGAGGGTCTG
ACCCGCGAGTACCACAGCCTGGGTGACCAGATTTCCAACGAAAAGGGTGATAAGAACGAGAAGGACAAGAAAGAC
CTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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