Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4055.t1
Gene name
Locationscaffold_07:651491..652811
Strand+
Gene length (bp)1320
Transcript length (bp)1194
Coding sequence length (bp)1194
Protein length (aa) 398

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12708 Pectate_lyase_3 Pectate lyase superfamily protein 7.8E-53 240 390

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4055.t1
MKLNRRSAVHQLRSVGLIFSLTIAFVFAACASADHNIHHRHTSLHHRSHGNVTSNDAATIVKDALAALAKVNKDR
TSNPNFNNLAFDKSQGAKKNSKLAATPLGYSPKAVESPHLIHRDATATPSSGNKAYSIPTELARAARIVAESTPN
KPTGNHSLVASQIRNKYGKGRRDTNAPSQALVHSNGLSDFLSTGTTDDIVFGNDTTHGAIQKRASTSKYWMATME
QNGKSAFAPAGYKVWRDVREYGAVGDGVTDDTEAINKAISDGGRCGLGCGSSTIYPATVWFPAGTYLVSSPIIQY
YNTEFLGDPLEVPTILAASSFVGLGVITSDVYVSDNEEWYINQNNFLRSVRNFKIDIRPTDPSAYICAIHWQVAQ
GTSLENIEFYMVYNSDVPSNTQ*
Coding >Pro_DTO377G3_2|g4055.t1
ATGAAGCTCAACAGGAGATCGGCGGTTCATCAGCTGCGATCGGTGGGTCTGATCTTCAGCTTGACAATTGCCTTT
GTCTTCGCAGCTTGCGCATCGGCAGATCATAATATTCACCACCGCCATACAAGTCTTCACCACCGGAGTCATGGT
AACGTTACCAGCAATGATGCCGCGACTATAGTGAAAGATGCTTTGGCAGCTCTCGCAAAAGTCAACAAAGATCGA
ACATCGAACCCCAATTTTAATAATTTGGCGTTTGATAAATCACAGGGAGCAAAAAAGAACTCCAAATTGGCTGCC
ACGCCTCTGGGCTATAGTCCTAAAGCAGTTGAAAGTCCTCATCTCATCCACCGTGACGCAACAGCTACCCCGTCC
AGCGGAAACAAGGCATATTCAATCCCGACTGAGCTGGCCCGCGCAGCTCGAATTGTCGCCGAGTCAACTCCAAAC
AAGCCGACTGGAAATCACAGTCTCGTGGCTTCCCAGATTCGCAATAAGTACGGAAAGGGTCGCAGGGATACCAAT
GCCCCAAGCCAGGCCTTGGTACATTCGAATGGTCTGAGTGACTTTTTATCGACCGGTACTACCGATGACATCGTG
TTTGGCAATGATACAACCCATGGAGCAATCCAAAAGCGAGCTAGTACTTCGAAGTACTGGATGGCTACGATGGAA
CAAAATGGAAAAAGTGCATTTGCTCCAGCTGGTTATAAAGTATGGAGAGATGTTCGCGAGTATGGAGCCGTCGGA
GATGGTGTCACAGACGATACAGAGGCCATCAACAAGGCTATCTCGGACGGTGGACGCTGCGGCCTCGGCTGTGGA
TCAAGTACTATCTACCCTGCGACAGTCTGGTTTCCTGCCGGAACATACCTGGTTAGCTCGCCAATCATTCAGTAC
TATAATACTGAGTTTTTGGGTGATCCCCTCGAAGTTCCTACCATCCTGGCTGCATCCAGTTTCGTTGGCCTGGGC
GTCATTACCTCCGATGTCTATGTCAGTGACAATGAAGAGTGGTATATTAATCAAAACAACTTCTTGCGCAGCGTT
AGAAACTTCAAAATCGACATCAGACCAACTGACCCCTCGGCATACATCTGTGCTATCCACTGGCAAGTTGCGCAA
GGGACGTCGCTGGAAAACATAGAATTTTACATGGTATACAATTCAGATGTTCCGTCGAACACGCAATAA
Transcript >Pro_DTO377G3_2|g4055.t1
ATGAAGCTCAACAGGAGATCGGCGGTTCATCAGCTGCGATCGGTGGGTCTGATCTTCAGCTTGACAATTGCCTTT
GTCTTCGCAGCTTGCGCATCGGCAGATCATAATATTCACCACCGCCATACAAGTCTTCACCACCGGAGTCATGGT
AACGTTACCAGCAATGATGCCGCGACTATAGTGAAAGATGCTTTGGCAGCTCTCGCAAAAGTCAACAAAGATCGA
ACATCGAACCCCAATTTTAATAATTTGGCGTTTGATAAATCACAGGGAGCAAAAAAGAACTCCAAATTGGCTGCC
ACGCCTCTGGGCTATAGTCCTAAAGCAGTTGAAAGTCCTCATCTCATCCACCGTGACGCAACAGCTACCCCGTCC
AGCGGAAACAAGGCATATTCAATCCCGACTGAGCTGGCCCGCGCAGCTCGAATTGTCGCCGAGTCAACTCCAAAC
AAGCCGACTGGAAATCACAGTCTCGTGGCTTCCCAGATTCGCAATAAGTACGGAAAGGGTCGCAGGGATACCAAT
GCCCCAAGCCAGGCCTTGGTACATTCGAATGGTCTGAGTGACTTTTTATCGACCGGTACTACCGATGACATCGTG
TTTGGCAATGATACAACCCATGGAGCAATCCAAAAGCGAGCTAGTACTTCGAAGTACTGGATGGCTACGATGGAA
CAAAATGGAAAAAGTGCATTTGCTCCAGCTGGTTATAAAGTATGGAGAGATGTTCGCGAGTATGGAGCCGTCGGA
GATGGTGTCACAGACGATACAGAGGCCATCAACAAGGCTATCTCGGACGGTGGACGCTGCGGCCTCGGCTGTGGA
TCAAGTACTATCTACCCTGCGACAGTCTGGTTTCCTGCCGGAACATACCTGGTTAGCTCGCCAATCATTCAGTAC
TATAATACTGAGTTTTTGGGTGATCCCCTCGAAGTTCCTACCATCCTGGCTGCATCCAGTTTCGTTGGCCTGGGC
GTCATTACCTCCGATGTCTATGTCAGTGACAATGAAGAGTGGTATATTAATCAAAACAACTTCTTGCGCAGCGTT
AGAAACTTCAAAATCGACATCAGACCAACTGACCCCTCGGCATACATCTGTGCTATCCACTGGCAAGTTGCGCAA
GGGACGTCGCTGGAAAACATAGAATTTTACATGGTATACAATTCAGATGTTCCGTCGAACACGCAATAA
Gene >Pro_DTO377G3_2|g4055.t1
ATGAAGCTCAACAGGAGATCGGCGGTTCATCAGCTGCGATCGGTGGGTCTGATCTTCAGCTTGACAATTGCCTTT
GTCTTCGCAGCTTGCGCATCGGCAGATCATAATATTCACCACCGCCATACAAGTCTTCACCACCGGAGTCATGGT
AACGTTACCAGCAATGATGCCGCGACTATAGTGAAAGATGCTTTGGCAGCTCTCGCAAAAGTCAACAAAGATCGA
ACATCGAACCCCAATTTTAATAATTTGGCGTTTGATAAATCACAGGGAGCAAAAAAGAACTCCAAATTGGCTGCC
ACGCCTCTGGGCTATAGTCCTAAAGCAGTTGAAAGTCCTCATCTCATCCACCGTGACGCAACAGCTACCCCGTCC
AGCGGAAACAAGGCATATTCAATCCCGACTGAGCTGGCCCGCGCAGCTCGAATTGTCGCCGAGTCAACTCCAAAC
AAGCCGACTGGAAATCACAGTCTCGTGGCTTCCCAGATTCGCAATAAGTACGGAAAGGGTCGCAGGGATACCAAT
GCCCCAAGCCAGGCCTTGGTACATTCGAATGGTCTGAGTGACTTTTTATCGACCGGTACTACCGATGACATCGTG
TTTGGCAATGATACAACCCATGGAGCAATCCAAAAGCGAGCTAGTACTTCGAAGTACTGGATGGCTACGATGGAA
CAAAATGGAAAAAGTGCATTTGCTCCAGCTGGTTATAAAGTACCCGCCCTCTTCCCCTCTCATTAATTTCCTTAA
GTTTGACGCAAAATAGGTATGGAGAGATGTTCGCGAGTATGGAGCCGTCGGAGATGGTGTCACAGACGATACAGA
GGCCATCAACAAGGCTATCTCGGACGGTGGACGCTGCGGCCTCGGCTGTGGATCAAGTACTATCTACCCTGCGAC
AGTCTGGTTTCCTGCCGGAACATACCTGGTTAGCTCGCCAATCATTCAGTACTATAATACTGAGTTTTTGGGTGA
TGTAAGTTTCTTCGAGCAATGCTGCTGAGCGATTGTTCTGCATGCTTGTGCTGTTTAATCACTGACAGCCACCAG
CCCCTCGAAGTTCCTACCATCCTGGCTGCATCCAGTTTCGTTGGCCTGGGCGTCATTACCTCCGATGTCTATGTC
AGTGACAATGAAGAGTGGTATATTAATCAAAACAACTTCTTGCGCAGCGTTAGAAACTTCAAAATCGACATCAGA
CCAACTGACCCCTCGGCATACATCTGTGCTATCCACTGGCAAGTTGCGCAAGGGACGTCGCTGGAAAACATAGAA
TTTTACATGGTATACAATTCAGATGTTCCGTCGAACACGCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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