Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4013.t1
Gene name
Locationscaffold_07:534817..536530
Strand+
Gene length (bp)1713
Transcript length (bp)1548
Coding sequence length (bp)1548
Protein length (aa) 516

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00928 Adap_comp_sub Adaptor complexes medium subunit family 1.3E-18 269 508
PF01217 Clat_adaptor_s Clathrin adaptor complex small chain 2.3E-07 8 131

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4013.t1
MVVLAASICTRGGKAVLSRQFREISRSRIEALLASFPKLADSGTQHTTVEQDNVRFVYQPLDELYIVLITNRQSN
ILQDIDSLHLFAQVTTSICKSLDEREILRNAFELLSAFDELVTMGYRENLSLTQIKTFLEMESHEERIQEIIERN
KELEASEERKRKAKQLEMQRKEAARTGRAAAPRTPTYPVYTPPARPSVPDSYDSYEAEKKQSFSKPIPTRGKGMQ
LGKKSKATDIYEKVRGDMGPEIEEESPLVAARASAPVHDIPSARESLQADREPIQLTIAETISATLTREGALKSF
EVKGDMQLRISDPSLTKLRLDCQAIPTHGAQFRTHPNVDKALFTNSSVIQLKDTTKRFPANNSIGVLRWRVASSA
DNADILPITFTVWVNKGSDSTTVTVEYELTGDDSLRDVVVTIPYGTTEPAVSSFDAVYEVSGDSLDWNLGTVDQS
NASGSFEFEAIDADENEFFPMSVHFTKTKPFVDVDINNVSLLDMEGEGVAFSKEVRSVADNFLIE*
Coding >Pro_DTO377G3_2|g4013.t1
ATGGTTGTTCTCGCAGCGTCGATATGCACCCGTGGAGGTAAAGCGGTTCTCTCGCGCCAGTTCCGAGAGATCTCC
CGCTCCCGAATTGAAGCCCTTCTCGCCTCCTTCCCTAAGCTGGCAGACTCCGGAACCCAGCATACTACTGTCGAG
CAAGACAACGTGCGCTTCGTGTACCAACCATTGGATGAGTTGTATATCGTGCTGATCACCAACCGTCAATCGAAC
ATTCTCCAAGACATCGACAGTCTCCATCTCTTTGCGCAAGTCACTACCAGCATCTGCAAGAGCCTAGACGAGCGG
GAGATTCTTCGCAATGCCTTTGAGCTCCTGAGTGCGTTTGATGAATTGGTAACTATGGGATACCGGGAGAACCTT
TCTCTCACTCAGATCAAGACCTTCCTGGAAATGGAGAGTCATGAGGAGAGAATCCAGGAAATCATTGAGCGGAAC
AAAGAGCTGGAGGCCAGCGAGGAGCGCAAGAGAAAGGCGAAGCAGCTGGAAATGCAACGCAAAGAGGCTGCTCGC
ACAGGTCGCGCCGCCGCCCCAAGAACCCCAACCTACCCCGTCTACACACCCCCAGCGCGCCCCTCCGTGCCTGAC
AGCTATGATTCATACGAGGCCGAAAAGAAACAGTCCTTTTCCAAGCCCATTCCCACCCGCGGCAAGGGCATGCAA
CTGGGCAAGAAATCAAAGGCAACGGATATCTACGAGAAGGTCCGGGGTGATATGGGGCCCGAAATTGAGGAGGAG
AGCCCATTGGTGGCTGCACGAGCTTCGGCTCCAGTGCATGACATTCCCTCAGCCCGCGAGTCTCTCCAGGCGGAT
CGGGAGCCCATCCAACTCACAATCGCCGAGACCATCTCAGCCACACTTACTCGGGAGGGAGCCTTGAAATCTTTC
GAGGTCAAGGGTGACATGCAACTCCGTATCAGTGATCCCTCACTCACCAAACTCCGACTCGACTGCCAGGCTATT
CCCACACATGGCGCACAGTTCCGCACTCACCCTAATGTCGACAAAGCTCTCTTCACCAACTCTTCGGTCATCCAA
CTGAAGGACACTACCAAGCGCTTCCCTGCCAACAACTCCATCGGAGTTCTCCGGTGGCGTGTTGCCAGTTCGGCT
GATAATGCCGATATTCTTCCAATCACATTCACCGTTTGGGTAAACAAGGGCTCTGACTCCACCACGGTGACTGTG
GAGTATGAGCTCACGGGCGACGATAGTCTCCGCGATGTGGTCGTCACTATTCCATATGGCACGACCGAGCCTGCT
GTATCTAGCTTTGATGCGGTCTACGAGGTCTCCGGTGACAGTCTGGACTGGAACCTGGGCACTGTTGATCAGTCG
AATGCCTCTGGCAGCTTTGAGTTCGAGGCGATTGATGCTGACGAGAATGAATTCTTCCCGATGAGTGTCCACTTC
ACGAAGACCAAGCCTTTCGTGGATGTCGACATCAACAATGTTTCCCTACTGGATATGGAGGGTGAGGGTGTTGCA
TTCTCGAAGGAAGTTCGCAGTGTTGCAGACAACTTCCTCATTGAGTAA
Transcript >Pro_DTO377G3_2|g4013.t1
ATGGTTGTTCTCGCAGCGTCGATATGCACCCGTGGAGGTAAAGCGGTTCTCTCGCGCCAGTTCCGAGAGATCTCC
CGCTCCCGAATTGAAGCCCTTCTCGCCTCCTTCCCTAAGCTGGCAGACTCCGGAACCCAGCATACTACTGTCGAG
CAAGACAACGTGCGCTTCGTGTACCAACCATTGGATGAGTTGTATATCGTGCTGATCACCAACCGTCAATCGAAC
ATTCTCCAAGACATCGACAGTCTCCATCTCTTTGCGCAAGTCACTACCAGCATCTGCAAGAGCCTAGACGAGCGG
GAGATTCTTCGCAATGCCTTTGAGCTCCTGAGTGCGTTTGATGAATTGGTAACTATGGGATACCGGGAGAACCTT
TCTCTCACTCAGATCAAGACCTTCCTGGAAATGGAGAGTCATGAGGAGAGAATCCAGGAAATCATTGAGCGGAAC
AAAGAGCTGGAGGCCAGCGAGGAGCGCAAGAGAAAGGCGAAGCAGCTGGAAATGCAACGCAAAGAGGCTGCTCGC
ACAGGTCGCGCCGCCGCCCCAAGAACCCCAACCTACCCCGTCTACACACCCCCAGCGCGCCCCTCCGTGCCTGAC
AGCTATGATTCATACGAGGCCGAAAAGAAACAGTCCTTTTCCAAGCCCATTCCCACCCGCGGCAAGGGCATGCAA
CTGGGCAAGAAATCAAAGGCAACGGATATCTACGAGAAGGTCCGGGGTGATATGGGGCCCGAAATTGAGGAGGAG
AGCCCATTGGTGGCTGCACGAGCTTCGGCTCCAGTGCATGACATTCCCTCAGCCCGCGAGTCTCTCCAGGCGGAT
CGGGAGCCCATCCAACTCACAATCGCCGAGACCATCTCAGCCACACTTACTCGGGAGGGAGCCTTGAAATCTTTC
GAGGTCAAGGGTGACATGCAACTCCGTATCAGTGATCCCTCACTCACCAAACTCCGACTCGACTGCCAGGCTATT
CCCACACATGGCGCACAGTTCCGCACTCACCCTAATGTCGACAAAGCTCTCTTCACCAACTCTTCGGTCATCCAA
CTGAAGGACACTACCAAGCGCTTCCCTGCCAACAACTCCATCGGAGTTCTCCGGTGGCGTGTTGCCAGTTCGGCT
GATAATGCCGATATTCTTCCAATCACATTCACCGTTTGGGTAAACAAGGGCTCTGACTCCACCACGGTGACTGTG
GAGTATGAGCTCACGGGCGACGATAGTCTCCGCGATGTGGTCGTCACTATTCCATATGGCACGACCGAGCCTGCT
GTATCTAGCTTTGATGCGGTCTACGAGGTCTCCGGTGACAGTCTGGACTGGAACCTGGGCACTGTTGATCAGTCG
AATGCCTCTGGCAGCTTTGAGTTCGAGGCGATTGATGCTGACGAGAATGAATTCTTCCCGATGAGTGTCCACTTC
ACGAAGACCAAGCCTTTCGTGGATGTCGACATCAACAATGTTTCCCTACTGGATATGGAGGGTGAGGGTGTTGCA
TTCTCGAAGGAAGTTCGCAGTGTTGCAGACAACTTCCTCATTGAGTAA
Gene >Pro_DTO377G3_2|g4013.t1
ATGGTAAGTCCTTGTTTTAATCTAATCCGCGGGGAATTGGACTAATCAACACACAACAGGTTGTTCTCGCAGCGT
CGATATGCACCCGTGGAGGTAAAGCGGTTCTCTCGCGCCAGTTCCGAGAGATCTCCCGCTCCCGAATTGAAGCCC
TTCTCGCCTCCTTCCCTAAGCTGGCAGACTCCGGAACCCAGCATACTACTGTCGAGCAAGACAACGTGCGCTTCG
TGTACCAACCATTGGATGAGTTGTATATCGTGCTGATCACCAACCGTCAATCGAACATTCTCCAAGACATCGACA
GTCTCCATCTCTTTGCGCAAGTCACTACCAGCATCTGCAAGAGCCTAGACGAGCGGGAGATTCTTCGCAATGCCT
TTGAGCTCCTGAGTGCGTTTGATGAATTGGTAACTATGGGATACCGGGAGAACCTTTCTCTCACTCAGATCAAGA
CCTTCCTGGAAATGGAGAGTCATGAGGAGAGAATCCAGGAAATCATTGAGCGGGTATGTGGAATCACCAGTGAAA
TTAGTTCATGGCTAACATACATTGATAGAACAAAGAGCTGGAGGCCAGCGAGGAGCGCAAGAGAAAGGCGAAGCA
GCTGGAAATGCAACGCAAAGAGGCTGCTCGCACAGGTCGCGCCGCCGCCCCAAGAACCCCAACCTACCCCGTCTA
CACACCCCCAGCGCGCCCCTCCGTGCCTGACAGCTATGATTCATACGAGGCCGAAAAGAAACAGTCCTTTTCCAA
GTACGTTTGGTTTTCTAATTTCACCGTTGCGAAACTACTGCTGACTGCGTGATCACTAGGCCCATTCCCACCCGC
GGCAAGGGCATGCAACTGGGCAAGAAATCAAAGGCAACGGATATCTACGAGAAGGTCCGGGGTGATATGGGGCCC
GAAATTGAGGAGGAGAGCCCATTGGTGGCTGCACGAGCTTCGGCTCCAGTGCATGACATTCCCTCAGCCCGCGAG
TCTCTCCAGGCGGATCGGGAGCCCATCCAACTCACAATCGCCGAGACCATCTCAGCCACACTTACTCGGGAGGGA
GCCTTGAAATCTTTCGAGGTCAAGGGTGACATGCAACTCCGTATCAGTGATCCCTCACTCACCAAACTCCGACTC
GACTGCCAGGCTATTCCCACACATGGCGCACAGTTCCGCACTCACCCTAATGTCGACAAAGCTCTCTTCACCAAC
TCTTCGGTCATCCAACTGAAGGACACTACCAAGCGCTTCCCTGCCAACAACTCCATCGGAGTTCTCCGGTGGCGT
GTTGCCAGTTCGGCTGATAATGCCGATATTCTTCCAATCACATTCACCGTTTGGGTAAACAAGGGCTCTGACTCC
ACCACGGTGACTGTGGAGTATGAGCTCACGGGCGACGATAGTCTCCGCGATGTGGTCGTCACTATTCCATATGGC
ACGACCGAGCCTGCTGTATCTAGCTTTGATGCGGTCTACGAGGTCTCCGGTGACAGTCTGGACTGGAACCTGGGC
ACTGTTGATCAGTCGAATGCCTCTGGCAGCTTTGAGTTCGAGGCGATTGATGCTGACGAGAATGAATTCTTCCCG
ATGAGTGTCCACTTCACGAAGACCAAGCCTTTCGTGGATGTCGACATCAACAATGTTTCCCTACTGGATATGGAG
GGTGAGGGTGTTGCATTCTCGAAGGAAGTTCGCAGTGTTGCAGACAACTTCCTCATTGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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