Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4002.t1
Gene name
Locationscaffold_07:499150..500248
Strand-
Gene length (bp)1098
Transcript length (bp)954
Coding sequence length (bp)954
Protein length (aa) 318

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01088 Peptidase_C12 Ubiquitin carboxyl-terminal hydrolase, family 1 3.0E-68 7 221
PF18031 UCH_C Ubiquitin carboxyl-terminal hydrolases 4.3E-09 252 283

GO

GO Term Description Terminal node
GO:0005622 intracellular Yes
GO:0006511 ubiquitin-dependent protein catabolic process Yes
GO:0004843 thiol-dependent ubiquitin-specific protease activity Yes
GO:1901575 organic substance catabolic process No
GO:0101005 ubiquitinyl hydrolase activity No
GO:0003824 catalytic activity No
GO:0044260 cellular macromolecule metabolic process No
GO:0009057 macromolecule catabolic process No
GO:0044265 cellular macromolecule catabolic process No
GO:0019783 ubiquitin-like protein-specific protease activity No
GO:0006508 proteolysis No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0044464 cell part No
GO:0044248 cellular catabolic process No
GO:0140096 catalytic activity, acting on a protein No
GO:0008234 cysteine-type peptidase activity No
GO:0051603 proteolysis involved in cellular protein catabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009056 catabolic process No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0019941 modification-dependent protein catabolic process No
GO:0070011 peptidase activity, acting on L-amino acid peptides No
GO:0005575 cellular_component No
GO:0008152 metabolic process No
GO:0043632 modification-dependent macromolecule catabolic process No
GO:0016787 hydrolase activity No
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0008233 peptidase activity No
GO:0019538 protein metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4002.t1
MADVGGWSTIESDEGLFTSLIETLGVKDTQFEELISLDADTIRALGTVYGVIFLFKWTREAAGARAEAPLDGTYD
PAATDKLFFAAQTIQNACGTQAILSVILNHDDPASPQPAIELGNELRSFKDFTTGFPPELRGEALSNSEAIRSAH
NSFARASPFADETARPQDDEKGADVYHFIAYTPVNGTLYELDGLQPHPISHGPCGAAEFPERVIEVLQRRIARYP
PDETHFNLMAVVRDPRGRARDIGDVETLEREERKRAAWQWENTLRRCNFVGFIGEVLKGVVGVKEKDPEGKAYGE
WVEGAKKETRKKLEMRR*
Coding >Pro_DTO377G3_2|g4002.t1
ATGGCTGATGTAGGTGGCTGGAGCACCATCGAGTCAGACGAGGGTCTCTTCACCTCTCTGATCGAAACACTTGGA
GTAAAAGACACGCAATTCGAAGAGCTCATATCTCTAGACGCAGACACGATACGGGCACTAGGCACAGTCTACGGC
GTAATCTTCCTCTTCAAATGGACGCGTGAAGCCGCCGGCGCACGCGCCGAAGCCCCCCTAGACGGAACCTACGAC
CCTGCCGCAACAGACAAGCTCTTCTTCGCGGCGCAGACGATCCAAAACGCCTGCGGCACGCAAGCGATCCTCTCC
GTAATCCTCAACCACGACGACCCAGCATCGCCACAGCCAGCAATCGAGCTCGGCAACGAGCTGCGCTCCTTCAAA
GACTTCACAACGGGGTTCCCGCCCGAGCTGCGCGGCGAGGCGCTGTCAAACTCGGAAGCCATCCGCAGCGCGCAC
AATAGCTTTGCGCGCGCGAGCCCGTTCGCCGACGAGACGGCGCGTCCGCAGGACGACGAGAAGGGTGCGGACGTT
TATCACTTCATTGCGTATACACCGGTTAATGGGACGTTGTATGAGTTGGATGGGCTGCAGCCGCATCCTATTAGC
CATGGTCCGTGCGGCGCGGCTGAGTTTCCCGAGAGGGTTATTGAGGTTCTGCAGAGGCGGATTGCGCGCTACCCG
CCTGACGAAACACATTTTAATCTTATGGCTGTTGTGCGGGATCCGCGTGGGAGGGCGAGGGACATTGGGGATGTG
GAGACGCTGGAGAGGGAGGAGAGGAAGAGGGCGGCATGGCAGTGGGAGAATACGCTCAGACGGTGTAATTTTGTT
GGGTTTATTGGGGAGGTTTTGAAGGGGGTTGTCGGGGTTAAGGAGAAGGATCCGGAGGGGAAGGCTTATGGGGAG
TGGGTTGAGGGTGCGAAGAAGGAGACGCGGAAGAAGCTTGAGATGCGGAGGTAG
Transcript >Pro_DTO377G3_2|g4002.t1
ATGGCTGATGTAGGTGGCTGGAGCACCATCGAGTCAGACGAGGGTCTCTTCACCTCTCTGATCGAAACACTTGGA
GTAAAAGACACGCAATTCGAAGAGCTCATATCTCTAGACGCAGACACGATACGGGCACTAGGCACAGTCTACGGC
GTAATCTTCCTCTTCAAATGGACGCGTGAAGCCGCCGGCGCACGCGCCGAAGCCCCCCTAGACGGAACCTACGAC
CCTGCCGCAACAGACAAGCTCTTCTTCGCGGCGCAGACGATCCAAAACGCCTGCGGCACGCAAGCGATCCTCTCC
GTAATCCTCAACCACGACGACCCAGCATCGCCACAGCCAGCAATCGAGCTCGGCAACGAGCTGCGCTCCTTCAAA
GACTTCACAACGGGGTTCCCGCCCGAGCTGCGCGGCGAGGCGCTGTCAAACTCGGAAGCCATCCGCAGCGCGCAC
AATAGCTTTGCGCGCGCGAGCCCGTTCGCCGACGAGACGGCGCGTCCGCAGGACGACGAGAAGGGTGCGGACGTT
TATCACTTCATTGCGTATACACCGGTTAATGGGACGTTGTATGAGTTGGATGGGCTGCAGCCGCATCCTATTAGC
CATGGTCCGTGCGGCGCGGCTGAGTTTCCCGAGAGGGTTATTGAGGTTCTGCAGAGGCGGATTGCGCGCTACCCG
CCTGACGAAACACATTTTAATCTTATGGCTGTTGTGCGGGATCCGCGTGGGAGGGCGAGGGACATTGGGGATGTG
GAGACGCTGGAGAGGGAGGAGAGGAAGAGGGCGGCATGGCAGTGGGAGAATACGCTCAGACGGTGTAATTTTGTT
GGGTTTATTGGGGAGGTTTTGAAGGGGGTTGTCGGGGTTAAGGAGAAGGATCCGGAGGGGAAGGCTTATGGGGAG
TGGGTTGAGGGTGCGAAGAAGGAGACGCGGAAGAAGCTTGAGATGCGGAGGTAG
Gene >Pro_DTO377G3_2|g4002.t1
ATGGCTGATGTAGGTGGCTGGAGCACCATCGAGTCAGACGAGGTACCATCAACCCCACGATCCATCCAAAGCAGC
ATAGTAACCCAAGCTAGGGTCTCTTCACCTCTCTGATCGAAACACTTGGAGTAAAAGACACGCAATTCGAAGAGC
TCATATCTCTAGACGCAGACACGATACGGGCACTAGGGTAAGCAACACAAACCTCCCAAACCTCCCAAGCCCCGC
AATTTCAATAAAATACTCCACAACCAAAACCAGTCCACAAAGCTAACCCCAAACAGCACAGTCTACGGCGTAATC
TTCCTCTTCAAATGGACGCGTGAAGCCGCCGGCGCACGCGCCGAAGCCCCCCTAGACGGAACCTACGACCCTGCC
GCAACAGACAAGCTCTTCTTCGCGGCGCAGACGATCCAAAACGCCTGCGGCACGCAAGCGATCCTCTCCGTAATC
CTCAACCACGACGACCCAGCATCGCCACAGCCAGCAATCGAGCTCGGCAACGAGCTGCGCTCCTTCAAAGACTTC
ACAACGGGGTTCCCGCCCGAGCTGCGCGGCGAGGCGCTGTCAAACTCGGAAGCCATCCGCAGCGCGCACAATAGC
TTTGCGCGCGCGAGCCCGTTCGCCGACGAGACGGCGCGTCCGCAGGACGACGAGAAGGGTGCGGACGTTTATCAC
TTCATTGCGTATACACCGGTTAATGGGACGTTGTATGAGTTGGATGGGCTGCAGCCGCATCCTATTAGCCATGGT
CCGTGCGGCGCGGCTGAGTTTCCCGAGAGGGTTATTGAGGTTCTGCAGAGGCGGATTGCGCGCTACCCGCCTGAC
GAAACACATTTTAATCTTATGGCTGTTGTGCGGGATCCGCGTGGGAGGGCGAGGGACATTGGGGATGTGGAGACG
CTGGAGAGGGAGGAGAGGAAGAGGGCGGCATGGCAGTGGGAGAATACGCTCAGACGGTGTAATTTTGTTGGGTTT
ATTGGGGAGGTTTTGAAGGGGGTTGTCGGGGTTAAGGAGAAGGATCCGGAGGGGAAGGCTTATGGGGAGTGGGTT
GAGGGTGCGAAGAAGGAGACGCGGAAGAAGCTTGAGATGCGGAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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