Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3959.t1
Gene name
Locationscaffold_07:381466..382602
Strand+
Gene length (bp)1136
Transcript length (bp)981
Coding sequence length (bp)981
Protein length (aa) 327

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00179 UQ_con Ubiquitin-conjugating enzyme 3.2E-10 17 88

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3959.t1
MSTSKLPCIPSLRKQQLHLEFASLRRAAPPGVYMSLAPGDPTLWNGVIFVRSGPYASAVLRFQLRFPDTYPDLPP
LVTFATDLFHPLIVPLTTYTYSTGSASDNPVSATDDERLPPGGFSLRHGFPHWFGRAKRNTSRNVSGASASAASI
GRASSTDPVTDDGDESNASNPPAASAASEDGDVEASRVAEVPAIDQFSERRDVVPVSEILDYIRSTFDDELVLDS
LPVEVAGNPGAWHAWQAHRRGGPRGQLKRGSPQARLPGDWHWDGIWARRVKDEIENSHSEPMLFGGAARGGVDEM
IRFSRLDDTTMNSVKEKMAAMAGDGI*
Coding >Pro_DTO377G3_2|g3959.t1
ATGTCGACCTCCAAGTTGCCCTGCATACCTTCACTTCGAAAGCAGCAGCTCCACCTGGAATTCGCGAGCCTGAGA
CGTGCAGCACCGCCAGGGGTTTACATGAGCCTTGCGCCTGGGGACCCGACACTTTGGAATGGAGTGATATTTGTT
CGCTCAGGTCCCTATGCTTCGGCCGTCCTCCGATTCCAGCTCCGCTTCCCAGACACCTATCCCGACCTTCCTCCT
CTAGTCACCTTCGCGACGGACTTGTTCCACCCATTGATTGTGCCTCTTACTACATATACCTATAGCACTGGCTCG
GCAAGTGACAATCCCGTCAGTGCGACGGACGATGAACGATTACCGCCCGGCGGATTCAGTCTGCGCCATGGATTC
CCCCACTGGTTTGGTAGGGCAAAACGGAACACATCACGGAATGTAAGCGGTGCTAGTGCAAGTGCTGCATCGATC
GGACGCGCAAGCTCTACCGATCCGGTTACAGACGATGGTGATGAATCGAACGCGTCAAACCCTCCAGCGGCATCA
GCGGCTAGTGAGGACGGCGATGTAGAAGCATCGCGGGTGGCAGAAGTACCTGCTATAGATCAGTTTTCGGAACGA
AGAGACGTTGTCCCTGTGTCCGAGATACTGGATTACATTCGGTCGACCTTTGATGACGAATTGGTTTTGGATTCG
CTGCCGGTTGAGGTTGCCGGGAACCCCGGGGCATGGCATGCATGGCAGGCACATCGTCGAGGAGGCCCTCGAGGA
CAACTGAAACGTGGAAGCCCGCAGGCTCGGCTTCCGGGGGATTGGCACTGGGATGGAATTTGGGCCAGGCGGGTG
AAAGATGAGATTGAAAACTCTCATTCTGAGCCGATGCTGTTTGGAGGTGCTGCTCGTGGGGGTGTGGATGAAATG
ATTCGATTCTCGCGGCTGGATGATACAACCATGAACTCAGTCAAGGAGAAAATGGCTGCAATGGCAGGGGACGGG
ATATAA
Transcript >Pro_DTO377G3_2|g3959.t1
ATGTCGACCTCCAAGTTGCCCTGCATACCTTCACTTCGAAAGCAGCAGCTCCACCTGGAATTCGCGAGCCTGAGA
CGTGCAGCACCGCCAGGGGTTTACATGAGCCTTGCGCCTGGGGACCCGACACTTTGGAATGGAGTGATATTTGTT
CGCTCAGGTCCCTATGCTTCGGCCGTCCTCCGATTCCAGCTCCGCTTCCCAGACACCTATCCCGACCTTCCTCCT
CTAGTCACCTTCGCGACGGACTTGTTCCACCCATTGATTGTGCCTCTTACTACATATACCTATAGCACTGGCTCG
GCAAGTGACAATCCCGTCAGTGCGACGGACGATGAACGATTACCGCCCGGCGGATTCAGTCTGCGCCATGGATTC
CCCCACTGGTTTGGTAGGGCAAAACGGAACACATCACGGAATGTAAGCGGTGCTAGTGCAAGTGCTGCATCGATC
GGACGCGCAAGCTCTACCGATCCGGTTACAGACGATGGTGATGAATCGAACGCGTCAAACCCTCCAGCGGCATCA
GCGGCTAGTGAGGACGGCGATGTAGAAGCATCGCGGGTGGCAGAAGTACCTGCTATAGATCAGTTTTCGGAACGA
AGAGACGTTGTCCCTGTGTCCGAGATACTGGATTACATTCGGTCGACCTTTGATGACGAATTGGTTTTGGATTCG
CTGCCGGTTGAGGTTGCCGGGAACCCCGGGGCATGGCATGCATGGCAGGCACATCGTCGAGGAGGCCCTCGAGGA
CAACTGAAACGTGGAAGCCCGCAGGCTCGGCTTCCGGGGGATTGGCACTGGGATGGAATTTGGGCCAGGCGGGTG
AAAGATGAGATTGAAAACTCTCATTCTGAGCCGATGCTGTTTGGAGGTGCTGCTCGTGGGGGTGTGGATGAAATG
ATTCGATTCTCGCGGCTGGATGATACAACCATGAACTCAGTCAAGGAGAAAATGGCTGCAATGGCAGGGGACGGG
ATATAA
Gene >Pro_DTO377G3_2|g3959.t1
ATGTCGACCTCCAAGTTGCCCTGCATACCTTCACTTCGAAAGCAGCAGCTCCACCTGGAATTGTGAGCCTATGTA
CCCCGCGAATACCATTTTATGTATTGACACCCCTACAGCGCGAGCCTGAGACGTGCAGCACCGCCAGGGGTTTAC
ATGAGCCTTGCGCCTGGGGACCCGACACTTTGGAATGGAGTGATATTTGTTCGCTCAGGTGAATTCAAATTTACT
ATTCCCTCCGCCATGCGTCGATTAACTCCTGTTTGTAGGTCCCTATGCTTCGGCCGTCCTCCGATTCCAGCTCCG
CTTCCCAGACACCTATCCCGACCTTCCTCCTCTAGTCACCTTCGCGACGGACTTGTTCCACCCATTGATTGTGCC
TCTTACTACATATACCTATAGCACTGGCTCGGCAAGTGACAATCCCGTCAGTGCGACGGACGATGAACGATTACC
GCCCGGCGGATTCAGTCTGCGCCATGGATTCCCCCACTGGTTTGGTAGGGCAAAACGGAACACATCACGGAATGT
AAGCGGTGCTAGTGCAAGTGCTGCATCGATCGGACGCGCAAGCTCTACCGATCCGGTTACAGACGATGGTGATGA
ATCGAACGCGTCAAACCCTCCAGCGGCATCAGCGGCTAGTGAGGACGGCGATGTAGAAGCATCGCGGGTGGCAGA
AGTACCTGCTATAGATCAGTTTTCGGAACGAAGAGACGTTGTCCCTGTGTCCGAGATACTGGATTACATTCGGTC
GACCTTTGATGACGAATTGGTTTTGGATTCGCTGCCGGTTGAGGTTGCCGGGAACCCCGGGGCATGGCATGCATG
GCAGGCACATCGTCGAGGAGGCCCTCGAGGACAACTGAAACGTGGAAGCCCGCAGGCTCGGCTTCCGGGGGATTG
GCACTGGGATGGAATTTGGGCCAGGCGGGTGAAAGATGAGATTGAAAACTCTCATTCTGAGCCGATGCTGTTTGG
AGGTGCTGCTCGTGGGGGTGTGGATGAAATGGTACATGACCCTTGGCGTCCTTTCTTGACTTGTACTAACCACAT
TTTAGATTCGATTCTCGCGGCTGGATGATACAACCATGAACTCAGTCAAGGAGAAAATGGCTGCAATGGCAGGGG
ACGGGATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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