Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g395.t1
Gene name
Location	scaffold_01:1003802..1006070
Strand	-
Gene length (bp)	2268
Transcript length (bp)	2166
Coding sequence length (bp)	2166
Protein length (aa)	722

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05970	PIF1	PIF1-like helicase	5.0E-51	228	432
PF05970	PIF1	PIF1-like helicase	5.3E-11	451	536
PF13604	AAA_30	AAA domain	1.1E-23	228	439
PF13245	AAA_19	AAA domain	2.9E-10	242	379

GO

GO Term	Description	Terminal node
GO:0000723	telomere maintenance	Yes
GO:0003678	DNA helicase activity	Yes
GO:0006281	DNA repair	Yes
GO:0004386	helicase activity	No
GO:0003824	catalytic activity	No
GO:0043170	macromolecule metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0016043	cellular component organization	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0140657	ATP-dependent activity	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008150	biological_process	No
GO:0051276	chromosome organization	No
GO:0008094	ATP-dependent activity, acting on DNA	No
GO:0006259	DNA metabolic process	No
GO:0033554	cellular response to stress	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0006974	cellular response to DNA damage stimulus	No
GO:0044238	primary metabolic process	No
GO:0009987	cellular process	No
GO:0140097	catalytic activity, acting on DNA	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0051716	cellular response to stimulus	No
GO:0006996	organelle organization	No
GO:0050896	response to stimulus	No
GO:0008152	metabolic process	No
GO:0006950	response to stress	No
GO:0006807	nitrogen compound metabolic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:0071840	cellular component organization or biogenesis	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0032200	telomere organization	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g395.t1 MFKKALQDHSGSGTKPLQQADLLHANSMAHSKPQLQSQSGGVKRKIEVAESSLGSLHNAVYFDENDFDDDLDLDE PYPLIMPSVAGTAISNKVTYPSLDTTLGIDRSVCGNENLTDVNYPDLPSISQEAEAPPSSMQLPWSSSPPSHFQP PAKKPRTLPWMKEEEEPREDKKKSFVTPKRSRPAEPWNKSESTIKAEQRELRQEYKKTQKSDINPKPENCSKVHN VFLSEEQQAVLKTVVERGKSMFFTGSAGTGKSVLMREIIAQLRYKYRKESDRIAVTASTGLAACNIGGVTLHSFA GIGLGKEPVPDLVKRIKKNPKARNRWLRTKVLVVDEVSMVDGDLFDKLEEIARRMRNNGRPFGGIQLVVTGDFFQ LPPVPDGGNREAKFAFAAASWTTCIQHTVLLTNIFRQRDPEFANMLNEMRLGKITPRTIEAFKRLSRPLDAKDQF EATELFPTRAEVDGANSARMGRLSGEIMRFNAVDSGAIQDPQQRARLLAGCIAPPMIQLKKGAQVMLIKNMEDSL VNGSIGKVVAFMSEDYFEVFRENDKNFTGDATTGSDEERAHQARKKLKPMGNQEGAASMARKWPLVSFLQPDGSE RQLLCQPETWKVELPNGEVQAQRQQVPLILAWALSIHKAQGQTLQRVKVDLGRVFEKGQAYVALSRAVSQEGLQV TRFEPRKVMVHPKVQEFYSKLTRGTEINKPKSSIALNPDDFEDEDF*
Coding	>Pro_DTO377G3_2\|g395.t1 ATGTTCAAGAAAGCCCTCCAAGACCACTCAGGCAGTGGCACGAAACCTCTTCAGCAAGCCGACTTATTGCATGCT AATTCAATGGCCCATTCGAAGCCACAATTACAATCACAATCCGGTGGTGTCAAACGAAAAATCGAAGTGGCCGAG TCCTCGCTGGGGTCCCTTCATAACGCGGTTTATTTCGATGAAAATGACTTCGATGATGATCTGGACCTCGATGAG CCCTATCCGCTGATTATGCCGAGTGTGGCTGGCACCGCCATCTCCAACAAAGTCACATATCCAAGCCTTGACACT ACATTGGGAATCGACCGGTCTGTTTGCGGCAACGAAAATCTAACAGATGTCAATTACCCCGATCTTCCATCCATA TCCCAAGAAGCAGAAGCTCCTCCCAGCAGCATGCAGTTACCTTGGTCGTCATCGCCGCCCTCTCATTTCCAACCG CCCGCGAAGAAACCTCGTACTCTTCCTTGGATGAAAGAAGAAGAGGAACCCCGCGAAGACAAGAAAAAGAGCTTT GTGACCCCCAAACGGTCGAGGCCTGCAGAACCATGGAACAAGTCCGAGAGCACCATCAAAGCGGAACAGAGAGAG TTGCGACAAGAATACAAGAAGACGCAAAAAAGCGACATAAACCCGAAACCAGAGAACTGTTCGAAGGTGCACAAT GTTTTCTTGAGTGAAGAGCAACAAGCTGTTCTTAAGACTGTTGTCGAGCGCGGAAAGAGCATGTTCTTCACTGGT TCTGCAGGAACAGGAAAATCGGTACTCATGAGGGAAATTATTGCGCAGCTGCGATATAAATATCGCAAAGAATCC GATCGAATTGCAGTCACAGCATCAACAGGTCTTGCGGCCTGCAATATCGGGGGTGTGACTCTCCACAGTTTTGCT GGGATAGGTCTAGGCAAAGAGCCAGTGCCCGACCTAGTGAAAAGGATCAAGAAAAACCCGAAAGCTCGAAATCGT TGGCTGCGTACCAAAGTCCTTGTCGTTGATGAAGTCTCCATGGTGGACGGGGATCTATTTGATAAACTCGAAGAG ATTGCCCGACGAATGCGCAACAATGGTCGTCCATTTGGAGGAATCCAGCTTGTTGTAACAGGCGACTTCTTTCAA TTACCTCCAGTCCCAGACGGAGGCAACCGGGAGGCAAAATTTGCGTTTGCAGCTGCTTCCTGGACCACTTGTATC CAACATACCGTTCTCTTAACCAACATCTTCCGTCAACGAGATCCGGAGTTTGCTAATATGCTGAATGAAATGCGA CTGGGTAAAATCACCCCTCGCACGATTGAGGCTTTTAAACGGCTCTCTCGGCCCCTTGATGCCAAAGACCAGTTC GAGGCAACGGAACTGTTCCCAACCCGCGCTGAAGTGGATGGTGCCAACTCTGCACGCATGGGAAGACTTTCTGGC GAGATTATGAGGTTCAACGCAGTGGATTCCGGAGCAATTCAGGACCCTCAGCAACGCGCGAGACTGCTGGCAGGC TGCATAGCCCCTCCTATGATCCAGCTGAAGAAGGGTGCCCAAGTGATGCTCATTAAGAATATGGAGGATTCGCTT GTCAATGGCTCTATTGGGAAAGTGGTAGCTTTCATGAGTGAAGATTACTTTGAGGTTTTCAGGGAAAACGACAAA AACTTTACCGGTGACGCGACGACTGGAAGCGATGAGGAGCGGGCTCACCAAGCTAGAAAAAAGCTGAAGCCTATG GGAAACCAAGAAGGCGCAGCTTCAATGGCCCGGAAATGGCCGCTTGTATCTTTCCTTCAGCCAGATGGGTCAGAA CGCCAGTTACTGTGTCAACCAGAGACGTGGAAGGTTGAGCTTCCCAACGGAGAAGTACAAGCCCAACGTCAACAA GTTCCGTTGATATTGGCGTGGGCCCTGTCCATACACAAGGCCCAAGGCCAGACTCTTCAACGTGTAAAAGTTGAT CTGGGTCGAGTGTTTGAAAAGGGCCAGGCTTATGTTGCACTAAGTCGAGCGGTGTCACAGGAGGGACTGCAGGTT ACTCGATTTGAGCCTCGGAAGGTGATGGTGCATCCGAAAGTGCAGGAATTCTACTCCAAACTCACCAGGGGCACA GAGATCAACAAGCCGAAGTCCTCAATTGCTTTGAACCCAGATGACTTTGAGGACGAAGACTTTTGA
Transcript	>Pro_DTO377G3_2\|g395.t1 ATGTTCAAGAAAGCCCTCCAAGACCACTCAGGCAGTGGCACGAAACCTCTTCAGCAAGCCGACTTATTGCATGCT AATTCAATGGCCCATTCGAAGCCACAATTACAATCACAATCCGGTGGTGTCAAACGAAAAATCGAAGTGGCCGAG TCCTCGCTGGGGTCCCTTCATAACGCGGTTTATTTCGATGAAAATGACTTCGATGATGATCTGGACCTCGATGAG CCCTATCCGCTGATTATGCCGAGTGTGGCTGGCACCGCCATCTCCAACAAAGTCACATATCCAAGCCTTGACACT ACATTGGGAATCGACCGGTCTGTTTGCGGCAACGAAAATCTAACAGATGTCAATTACCCCGATCTTCCATCCATA TCCCAAGAAGCAGAAGCTCCTCCCAGCAGCATGCAGTTACCTTGGTCGTCATCGCCGCCCTCTCATTTCCAACCG CCCGCGAAGAAACCTCGTACTCTTCCTTGGATGAAAGAAGAAGAGGAACCCCGCGAAGACAAGAAAAAGAGCTTT GTGACCCCCAAACGGTCGAGGCCTGCAGAACCATGGAACAAGTCCGAGAGCACCATCAAAGCGGAACAGAGAGAG TTGCGACAAGAATACAAGAAGACGCAAAAAAGCGACATAAACCCGAAACCAGAGAACTGTTCGAAGGTGCACAAT GTTTTCTTGAGTGAAGAGCAACAAGCTGTTCTTAAGACTGTTGTCGAGCGCGGAAAGAGCATGTTCTTCACTGGT TCTGCAGGAACAGGAAAATCGGTACTCATGAGGGAAATTATTGCGCAGCTGCGATATAAATATCGCAAAGAATCC GATCGAATTGCAGTCACAGCATCAACAGGTCTTGCGGCCTGCAATATCGGGGGTGTGACTCTCCACAGTTTTGCT GGGATAGGTCTAGGCAAAGAGCCAGTGCCCGACCTAGTGAAAAGGATCAAGAAAAACCCGAAAGCTCGAAATCGT TGGCTGCGTACCAAAGTCCTTGTCGTTGATGAAGTCTCCATGGTGGACGGGGATCTATTTGATAAACTCGAAGAG ATTGCCCGACGAATGCGCAACAATGGTCGTCCATTTGGAGGAATCCAGCTTGTTGTAACAGGCGACTTCTTTCAA TTACCTCCAGTCCCAGACGGAGGCAACCGGGAGGCAAAATTTGCGTTTGCAGCTGCTTCCTGGACCACTTGTATC CAACATACCGTTCTCTTAACCAACATCTTCCGTCAACGAGATCCGGAGTTTGCTAATATGCTGAATGAAATGCGA CTGGGTAAAATCACCCCTCGCACGATTGAGGCTTTTAAACGGCTCTCTCGGCCCCTTGATGCCAAAGACCAGTTC GAGGCAACGGAACTGTTCCCAACCCGCGCTGAAGTGGATGGTGCCAACTCTGCACGCATGGGAAGACTTTCTGGC GAGATTATGAGGTTCAACGCAGTGGATTCCGGAGCAATTCAGGACCCTCAGCAACGCGCGAGACTGCTGGCAGGC TGCATAGCCCCTCCTATGATCCAGCTGAAGAAGGGTGCCCAAGTGATGCTCATTAAGAATATGGAGGATTCGCTT GTCAATGGCTCTATTGGGAAAGTGGTAGCTTTCATGAGTGAAGATTACTTTGAGGTTTTCAGGGAAAACGACAAA AACTTTACCGGTGACGCGACGACTGGAAGCGATGAGGAGCGGGCTCACCAAGCTAGAAAAAAGCTGAAGCCTATG GGAAACCAAGAAGGCGCAGCTTCAATGGCCCGGAAATGGCCGCTTGTATCTTTCCTTCAGCCAGATGGGTCAGAA CGCCAGTTACTGTGTCAACCAGAGACGTGGAAGGTTGAGCTTCCCAACGGAGAAGTACAAGCCCAACGTCAACAA GTTCCGTTGATATTGGCGTGGGCCCTGTCCATACACAAGGCCCAAGGCCAGACTCTTCAACGTGTAAAAGTTGAT CTGGGTCGAGTGTTTGAAAAGGGCCAGGCTTATGTTGCACTAAGTCGAGCGGTGTCACAGGAGGGACTGCAGGTT ACTCGATTTGAGCCTCGGAAGGTGATGGTGCATCCGAAAGTGCAGGAATTCTACTCCAAACTCACCAGGGGCACA GAGATCAACAAGCCGAAGTCCTCAATTGCTTTGAACCCAGATGACTTTGAGGACGAAGACTTTTGA
Gene	>Pro_DTO377G3_2\|g395.t1 ATGTTCAAGAAAGCCCTCCAAGACCACTCAGGCAGTGGCACGAAACCTCTTCAGCAAGCCGACTTATTGCATGCT AATTCAATGGCCCATTCGAAGCCACAATTACAATCACAATCCGGTGGTGTCAAACGAAAAATCGAAGTGGCCGAG TCCTCGCTGGGGTCCCTTCATAACGCGGTTTATTTCGATGAAAATGACTTCGATGATGATCTGGACCTCGATGAG CCCTATCCGCTGATTATGCCGAGTGTGGCTGGCACCGCCATCTCCAACAAAGTCACATATCCAAGCCTTGACACT ACATTGGGAATCGACCGGTCTGTTTGCGGCAACGAAAATCTAACAGATGTCAATTACCCCGATCTTCCATCCATA TCCCAAGAAGCAGAAGCTCCTCCCAGCAGCATGCAGTTACCTTGGTCGTCATCGCCGCCCTCTCATTTCCAACCG CCCGCGAAGAAACCTCGTACTCTTCCTTGGATGAAAGAAGAAGAGGAACCCCGCGAAGACAAGAAAAAGAGCTTT GTGACCCCCAAACGGTCGAGGCCTGCAGAACCATGGAACAAGTCCGAGAGCACCATCAAAGCGGAACAGAGAGAG TTGCGACAAGAATACAAGAAGACGCAAAAAAGCGACATAAACCCGAAACCAGAGAACTGTTCGAAGGTGCACAAT GTTTTCTTGAGTGAAGAGCAACAAGCTGTTCTTAAGACTGTTGTCGAGCGCGGAAAGAGCATGTTCTTCACTGGT TCTGCAGGAACAGGAAAATCGGTACTCATGAGGGAAATTATTGCGCAGCTGCGATATAAATATCGCAAAGAATCC GATCGAATTGCAGTCACAGCATCAACAGGTCTTGCGGCCTGCAATATCGGGGGTGTGACTCTCCACAGTTTTGCT GGGATAGGTCTAGGCAAAGAGCCAGTGCCCGACCTAGTGAAAAGGGTTGGAGTCTCTCTCTATTCACCCAGGAAT TGCAGATGCTAACAACATTCAGATCAAGAAAAACCCGAAAGCTCGAAATCGTTGGCTGCGTACCAAAGTCCTTGT CGTTGATGAAGTCTCCATGGTGGACGGGGATCTATTTGATAAACTCGAAGAGATTGCCCGACGAATGCGCAACAA TGGTCGTCCATTTGGAGGAATCCAGCTTGTTGTAACAGGCGACTTCTTTCAATTACCTCCAGTCCCAGACGGAGG CAACCGGGAGGCAAAATTTGCGTTTGCAGCTGCTTCCTGGACCACTTGTATCCAACATACCGTTCTCTTAACCAA CATCTTCCGTCAACGAGATCCGGAGTTTGCTAATATGCTGAATGAAATGCGACTGGGTAAAATCACCCCTCGCAC GATTGAGGCTTTTAAACGGCTCTCTCGGCCCCTTGATGCCAAAGACCAGTTCGAGGCAACGGAACTGTAAGTTTT ACTATATACTTATACTGTGTCAAATCTGACTCTTGAATTAGGTTCCCAACCCGCGCTGAAGTGGATGGTGCCAAC TCTGCACGCATGGGAAGACTTTCTGGCGAGATTATGAGGTTCAACGCAGTGGATTCCGGAGCAATTCAGGACCCT CAGCAACGCGCGAGACTGCTGGCAGGCTGCATAGCCCCTCCTATGATCCAGCTGAAGAAGGGTGCCCAAGTGATG CTCATTAAGAATATGGAGGATTCGCTTGTCAATGGCTCTATTGGGAAAGTGGTAGCTTTCATGAGTGAAGATTAC TTTGAGGTTTTCAGGGAAAACGACAAAAACTTTACCGGTGACGCGACGACTGGAAGCGATGAGGAGCGGGCTCAC CAAGCTAGAAAAAAGCTGAAGCCTATGGGAAACCAAGAAGGCGCAGCTTCAATGGCCCGGAAATGGCCGCTTGTA TCTTTCCTTCAGCCAGATGGGTCAGAACGCCAGTTACTGTGTCAACCAGAGACGTGGAAGGTTGAGCTTCCCAAC GGAGAAGTACAAGCCCAACGTCAACAAGTTCCGTTGATATTGGCGTGGGCCCTGTCCATACACAAGGCCCAAGGC CAGACTCTTCAACGTGTAAAAGTTGATCTGGGTCGAGTGTTTGAAAAGGGCCAGGCTTATGTTGCACTAAGTCGA GCGGTGTCACAGGAGGGACTGCAGGTTACTCGATTTGAGCCTCGGAAGGTGATGGTGCATCCGAAAGTGCAGGAA TTCTACTCCAAACTCACCAGGGGCACAGAGATCAACAAGCCGAAGTCCTCAATTGCTTTGAACCCAGATGACTTT GAGGACGAAGACTTTTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences