Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3929.t1
Gene name
Locationscaffold_07:301147..302987
Strand-
Gene length (bp)1840
Transcript length (bp)1350
Coding sequence length (bp)1350
Protein length (aa) 450

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00128 Alpha-amylase Alpha amylase, catalytic domain 2.9E-06 24 168

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0003824 catalytic activity Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3929.t1
MQGFEWHVPADQRHWQRLRKAIPDLKDIGVDNIWIPPGCKGMDPSGIGYDIYDLYDLGEFDQKGTRATRWGPKED
LQRLVWAAKDMDIGIYWDAVLNQKAGADSTENLLVVKMDPEDRNIEISRPLTIDGWVGFDFPGRGEKYSSMKYHW
QHFTGVDWDDASQQNAIYKILGQNKDWAKDVSDEHGNYDYLMFADLDHSHPEWNANRRISEYWRGEVGLLLGYLK
LMDYGVSLFDVPLLGQFAAISKIAGGDLRNIFKGTLVEQMPSHAVTFVGNHDTQDGHSLETIIAPFFKPLAYSLI
LLRSQGQPCIFYGDFYGINCGSKPPGTCGEMLPILTRARKLYAHGKQRDYFNRRNCIGFVRYENYKHPFSLACIL
SNGGASSKRMFVGHRHAGELWTDILGWQNETVLINNCGYGVFSVASMSVSVWVNSQAEGRNRINRPFNEDIYSL*
Coding >Pro_DTO377G3_2|g3929.t1
ATGCAGGGGTTTGAATGGCACGTGCCAGCCGATCAACGCCATTGGCAGCGCCTCCGCAAGGCAATCCCCGATCTG
AAAGACATCGGAGTTGATAATATCTGGATTCCTCCCGGGTGTAAAGGGATGGACCCATCTGGAATTGGGTATGAT
ATTTACGATCTATATGATCTTGGGGAATTCGACCAGAAGGGCACCAGAGCAACGCGATGGGGTCCAAAGGAGGAC
CTCCAGAGATTGGTATGGGCTGCAAAGGATATGGATATTGGGATTTACTGGGATGCTGTTTTAAACCAGAAGGCT
GGGGCAGATTCAACCGAGAATCTCTTAGTCGTCAAGATGGACCCAGAAGATCGGAACATTGAAATATCTCGACCG
CTGACTATCGATGGTTGGGTTGGGTTTGACTTTCCGGGACGTGGGGAGAAATACAGCTCCATGAAGTATCACTGG
CAACACTTTACTGGTGTGGACTGGGACGATGCGAGCCAGCAGAATGCAATATACAAGATACTGGGACAGAACAAA
GACTGGGCGAAGGACGTGAGTGATGAGCATGGAAACTACGACTACCTAATGTTCGCCGATCTCGACCATTCCCAC
CCGGAATGGAATGCGAATCGACGCATTTCGGAGTACTGGAGAGGAGAGGTGGGTCTACTTCTGGGGTATCTCAAG
TTAATGGATTATGGGGTCTCGTTGTTCGATGTGCCACTTTTGGGCCAGTTTGCAGCTATCTCGAAGATCGCAGGC
GGTGATCTACGGAATATTTTCAAAGGCACGTTGGTAGAACAGATGCCGTCGCATGCAGTAACTTTTGTTGGAAAT
CATGACACGCAGGATGGACATTCATTAGAGACTATCATTGCACCATTTTTCAAACCTCTTGCATACTCTTTAATC
CTCCTCCGAAGCCAAGGGCAGCCATGCATTTTCTACGGAGACTTCTATGGAATCAATTGTGGATCCAAGCCTCCT
GGGACATGCGGCGAAATGCTTCCCATACTCACGCGTGCGCGAAAGTTATATGCACACGGGAAACAACGGGACTAC
TTCAATAGACGGAACTGCATTGGATTCGTGCGCTACGAGAACTATAAACACCCGTTCAGTCTTGCCTGTATCCTT
AGCAACGGTGGCGCATCCTCCAAGCGCATGTTTGTTGGTCACAGACATGCCGGGGAGTTGTGGACAGATATTCTT
GGCTGGCAAAATGAGACGGTACTCATTAATAACTGCGGCTATGGAGTTTTCTCAGTGGCCAGCATGAGTGTCAGT
GTCTGGGTTAATTCTCAAGCGGAGGGGAGGAATCGAATCAATCGGCCTTTCAACGAGGATATATACAGCCTATAA
Transcript >Pro_DTO377G3_2|g3929.t1
ATGCAGGGGTTTGAATGGCACGTGCCAGCCGATCAACGCCATTGGCAGCGCCTCCGCAAGGCAATCCCCGATCTG
AAAGACATCGGAGTTGATAATATCTGGATTCCTCCCGGGTGTAAAGGGATGGACCCATCTGGAATTGGGTATGAT
ATTTACGATCTATATGATCTTGGGGAATTCGACCAGAAGGGCACCAGAGCAACGCGATGGGGTCCAAAGGAGGAC
CTCCAGAGATTGGTATGGGCTGCAAAGGATATGGATATTGGGATTTACTGGGATGCTGTTTTAAACCAGAAGGCT
GGGGCAGATTCAACCGAGAATCTCTTAGTCGTCAAGATGGACCCAGAAGATCGGAACATTGAAATATCTCGACCG
CTGACTATCGATGGTTGGGTTGGGTTTGACTTTCCGGGACGTGGGGAGAAATACAGCTCCATGAAGTATCACTGG
CAACACTTTACTGGTGTGGACTGGGACGATGCGAGCCAGCAGAATGCAATATACAAGATACTGGGACAGAACAAA
GACTGGGCGAAGGACGTGAGTGATGAGCATGGAAACTACGACTACCTAATGTTCGCCGATCTCGACCATTCCCAC
CCGGAATGGAATGCGAATCGACGCATTTCGGAGTACTGGAGAGGAGAGGTGGGTCTACTTCTGGGGTATCTCAAG
TTAATGGATTATGGGGTCTCGTTGTTCGATGTGCCACTTTTGGGCCAGTTTGCAGCTATCTCGAAGATCGCAGGC
GGTGATCTACGGAATATTTTCAAAGGCACGTTGGTAGAACAGATGCCGTCGCATGCAGTAACTTTTGTTGGAAAT
CATGACACGCAGGATGGACATTCATTAGAGACTATCATTGCACCATTTTTCAAACCTCTTGCATACTCTTTAATC
CTCCTCCGAAGCCAAGGGCAGCCATGCATTTTCTACGGAGACTTCTATGGAATCAATTGTGGATCCAAGCCTCCT
GGGACATGCGGCGAAATGCTTCCCATACTCACGCGTGCGCGAAAGTTATATGCACACGGGAAACAACGGGACTAC
TTCAATAGACGGAACTGCATTGGATTCGTGCGCTACGAGAACTATAAACACCCGTTCAGTCTTGCCTGTATCCTT
AGCAACGGTGGCGCATCCTCCAAGCGCATGTTTGTTGGTCACAGACATGCCGGGGAGTTGTGGACAGATATTCTT
GGCTGGCAAAATGAGACGGTACTCATTAATAACTGCGGCTATGGAGTTTTCTCAGTGGCCAGCATGAGTGTCAGT
GTCTGGGTTAATTCTCAAGCGGAGGGGAGGAATCGAATCAATCGGCCTTTCAACGAGGATATATACAGCCTATAA
Gene >Pro_DTO377G3_2|g3929.t1
ATGCAGGGGTTTGAATGGCACGTGCCAGCCGATCAACGCCATTGGCAGCGCCTCCGCAAGGCAATCCCCGATCTG
AAAGACATCGGAGTTGATAATATCTGGATTCCTCCCGGGTGTAAAGGGATGGACCCATCTGGAATTGGGTATGAT
ATTTACGATCTATATGATCTTGGGGAATTCGACCAGAAGGGCACCAGAGCAACGCGATGGGGTCCAAAGGAGGAC
CTCCAGAGATTGGTATGGGCTGCAAAGGATATGGATATTGGGATTTACTGGGATGCTGTTTTAAACCAGAAGGCT
GGGGCAGATTCAACCGAGAATCTCTTAGTCGTCAAGATGGACCCAGAAGGTGATTTCTATTCCTGCTGACAAATG
GAAGATGAGAGCGCTTATGGAGGTCAACGATCTTGCAGATCGGAACATTGAAATATCTCGACCGCTGACTATCGA
TGGTTGGGTTGGGTTTGACTTTCCGGGACGTGGGGAGAAATACAGCTCCATGAAGTATCACTGGCAACACTTTAC
TGGTGTGGACTGGGACGATGCGAGCCAGCAGAATGCAATATACAAGATACTGGGACAGAACAAAGACTGGGCGAA
GGACGTGAGTGATGAGCATGGAAACTACGACTACCTAATGTTCGCCGATCTCGACCATTCCCACCCGGAAGTTCG
AGCTGATATAATGAAATGGGGAGTGGATTGGCACTGAATTACCAACCAGTGGAATGCGAATCGACGCAGTAAAGC
ATTATTCCGCGTCTTTCCAAAAAGAATTTGACACATTTGCGCAATACTGTTGGCGCTGATTATTTCTTAGTTTCG
GAGTACTGGAGAGGAGAGGTGGGTCTACTTCTGGGGTATCTCAAGTTAATGGATTATGGGGTCTCGTTGTTCGAT
GTGCCACTTTTGGGCCAGTTTGCAGCTATCTCGAAGATCGCAGGCGGTGATCTACGGAATATTTTCAAAGGCACG
TTGGTAGAACAGATGCCGTCGCATGCAGTAGTAAGACCCAATTATTTTGGTAGAAAGGACTCCCACTAACCATCA
CTACCACGTCAGACTTTTGTTGGAAATCATGACACGGTATGTTGAAGTCCTGTGAGGATATGATGGAGCTTACAA
TCCTCTAGCAGGATGGACATTCATTAGAGGTGAGATAGACCAAAGCTTTAGCATTATACATCCTAGGGCGTGGAT
AGTAACTAAATACCCCAGCAGACTATCATTGCACCATTTTTCAAACCTCTTGCATACTCTTTAATCCTCCTCCGA
AGCCAAGGGCAGCCATGCATTTTCTACGGAGACTTCTATGGAATCAATTGTGGATCCAAGCCTCCTGGGACATGC
GGCGAAATGCTTCCCATACTCACGCGTGCGCGAAAGTTATATGCACACGGGAAACAACGGGACTACTTCAATAGA
CGGAACTGCATTGGTCAGTATCACTTTTTTGGATGTAGATTGCTTGTTCTTACGATTATACAGGATTCGTGCGCT
ACGAGAACTATAAACACCCGTTCAGTCTTGCCTGTATCCTTAGCAACGGTGGCGCATCCTCCAAGCGCATGTTTG
TTGGTCACAGACATGCCGGGGAGTTGTGGACAGATATTCTTGGCTGGCAAAATGAGACGGTACTCATTAATAACT
GCGGCTATGGAGTTTTCTCAGTGGCCAGCATGAGTGTCAGTGTCTGGGTTAATTCTCAAGCGGAGGGGAGGAATC
GAATCAATCGGCCTTTGTAAGTTTCATACATCAAGAACAGTTATGTTCAGAAATCAGGCATTGAAATACTAACTA
GTCTTTTCATTTTAGCAACGAGGATATATACAGCCTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail