Protein ID | Pro_DTO377G3_2|g3916.t1 |
Gene name | |
Location | scaffold_07:255327..258126 |
Strand | - |
Gene length (bp) | 2799 |
Transcript length (bp) | 2799 |
Coding sequence length (bp) | 2799 |
Protein length (aa) | 933 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | 8.5E-46 | 635 | 795 |
PF17871 | AAA_lid_9 | AAA lid domain | 6.4E-33 | 367 | 468 |
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 8.5E-14 | 226 | 343 |
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 2.7E-09 | 637 | 771 |
PF10431 | ClpB_D2-small | C-terminal, D2-small domain, of ClpB protein | 5.1E-24 | 803 | 885 |
PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | 3.6E-09 | 636 | 755 |
PF00158 | Sigma54_activat | Sigma-54 interaction domain | 4.4E-05 | 634 | 751 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016887 | ATP hydrolysis activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0008134 | transcription factor binding | Yes |
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0017076 | purine nucleotide binding | No |
GO:0005488 | binding | No |
GO:0050789 | regulation of biological process | No |
GO:0000166 | nucleotide binding | No |
GO:0010468 | regulation of gene expression | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0005515 | protein binding | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0008150 | biological_process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0043167 | ion binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0050794 | regulation of cellular process | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0016787 | hydrolase activity | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0019222 | regulation of metabolic process | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0036094 | small molecule binding | No |
GO:0065007 | biological regulation | No |
GO:0003824 | catalytic activity | No |
Orthofinder run ID | 2 |
Orthogroup | 7817 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3916.t1 MNGVQFTDRANKALLDSSGLCEQYAHSQIMPLHLAVALLNPSPDESQDQQTPSGAHASHDSAAAPLFRQVVERAH GDPQLLDRSLMKLLVRLPSQDPPPENPSVSPQLSKVIRAATDLSKTQKDSFVAVDHLIQSVCQDSQVQRALGDAN IPNLKLIDTAIQQIRGTKRVDSKTADAEGENENLKKFTIDMTALAREGKIDPVIGREEEIRRVIRILSRRTKNNP VLIGEPGVGKTTIVEGLARRIVNADIPANLAQCRLLSLDVGSLVAGSKYRGEFEERMKGVLKEIEDSKDTILLFV DEIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLSEYRKYIEKDQAFERRFQQVLVKEPTVPETISILR GLKEKYEAHHGVNILDGAIVAAATLASRYLTARRLPDSAVDLIDEAAAAVRVTRESEPEALDTLERKARQLQIEI HALGREQDEASKARLEAAKQEAANVGEELRPMREKYENEKQRSREVQEAKIKLDSLKVKRDEAERLGDTQTAADL EYYAIPETKALIERLETERAKADAERRAQAGDSGEALLADAVGPDQINEIVGRWTGIPVNRLKTTEKDKLLNMEK YLSKVVVGQKEAVVSVSNAIRLQRSGLSNPNAPPSFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMSEYQER HSLSRMIGAPPGYVGHDAGGQLTESLRRRPFSILLFDEVEKAAKEVLTVLLQLMDDGRITDGQGRVVDAKNCIVV MTSNLGAQYLSRPTTKDGRIEPQTRELVMNALRDYFLPEFLNRISSTVIFNRLTRREIRKIVDLRLSEVQKRLDN NERNVTIECSDEVKDYLGAAGYSPAYGARPLGRLIEREILNRLAVLILRGSIKDGEVAHVVMRDSRIDVLPNHDL GEASEMSDDEMMDEDDLDAEMADNPVSPDLYD* |
Coding | >Pro_DTO377G3_2|g3916.t1 ATGAACGGCGTCCAATTCACAGATCGGGCCAACAAGGCCCTGCTGGACTCCAGCGGGCTCTGCGAGCAATATGCA CACTCCCAGATCATGCCTCTTCACTTGGCAGTCGCATTGCTCAACCCCTCCCCAGATGAGTCTCAAGATCAACAG ACTCCTTCTGGTGCCCACGCATCCCACGATTCCGCAGCCGCCCCTCTCTTCCGCCAGGTCGTTGAACGAGCCCAC GGCGACCCTCAACTCCTCGACCGATCGCTAATGAAGCTATTGGTCCGCCTGCCCAGTCAAGATCCCCCTCCAGAG AACCCCAGTGTTTCTCCCCAACTCTCTAAAGTCATTCGGGCAGCCACCGATTTGTCGAAAACACAAAAGGACAGC TTCGTCGCAGTTGATCATCTCATTCAGTCTGTTTGCCAGGATTCACAAGTTCAGCGTGCGCTAGGCGATGCCAAT ATTCCCAATCTCAAGTTGATCGACACTGCTATCCAGCAAATTCGCGGTACAAAGCGGGTCGATTCCAAGACCGCC GATGCCGAGGGCGAGAATGAAAACCTGAAGAAGTTCACCATTGATATGACTGCCTTGGCTCGTGAGGGCAAGATC GATCCGGTCATTGGCCGAGAGGAGGAAATCCGCCGTGTCATTCGTATTCTCAGTCGCCGCACGAAGAACAACCCT GTGCTTATTGGTGAGCCTGGTGTCGGTAAGACCACCATTGTCGAAGGCCTCGCTCGCCGTATTGTCAACGCCGAT ATCCCTGCCAACCTCGCTCAGTGCCGTCTTCTTTCTCTTGATGTCGGTTCTCTGGTTGCGGGCAGCAAATACCGC GGTGAATTCGAAGAACGTATGAAGGGTGTCCTCAAGGAAATCGAAGATTCCAAGGATACCATTCTCCTCTTCGTC GATGAGATCCACCTGCTTATGGGCGCTGGTTCTAGCGGCGAAGGCGGTATGGACGCTGCCAACCTTCTCAAGCCC ATGCTGGCTCGTGGCCAATTGCATTGTATTGGTGCCACGACTCTCTCTGAATACCGCAAGTATATCGAGAAGGAT CAGGCTTTCGAGCGACGATTCCAGCAAGTCCTTGTCAAGGAGCCTACAGTCCCAGAAACCATCTCTATTCTTCGT GGTCTGAAGGAAAAATACGAGGCTCACCACGGTGTCAACATTCTCGATGGAGCCATCGTCGCTGCCGCCACTCTC GCATCTCGCTACCTGACAGCTCGTCGACTCCCCGATTCTGCGGTCGATTTGATTGATGAGGCTGCGGCTGCAGTC CGAGTCACTCGCGAGTCCGAGCCAGAAGCCCTCGACACACTGGAAAGAAAGGCCCGCCAGCTTCAAATTGAAATT CACGCCCTTGGCCGTGAGCAAGACGAAGCATCCAAGGCTCGTCTCGAGGCCGCCAAGCAGGAAGCTGCCAATGTT GGCGAGGAGCTTCGGCCGATGCGCGAGAAGTACGAAAATGAGAAGCAGCGCAGCCGCGAAGTTCAGGAGGCCAAG ATCAAGCTGGATTCTCTCAAGGTCAAGCGTGACGAAGCCGAACGATTGGGCGATACCCAGACAGCCGCTGATCTC GAATACTACGCCATCCCGGAAACCAAAGCTCTCATCGAGCGTCTGGAGACTGAGCGGGCCAAGGCTGATGCTGAA CGCCGCGCTCAAGCGGGCGACTCTGGTGAAGCACTCCTTGCCGATGCAGTTGGTCCCGATCAAATCAATGAAATC GTTGGCCGCTGGACCGGTATTCCTGTTAACAGACTCAAGACCACTGAAAAGGACAAGCTGCTTAACATGGAGAAA TACCTTTCCAAGGTTGTTGTTGGTCAGAAGGAAGCTGTTGTTTCGGTCTCTAACGCCATTCGCTTGCAGCGCTCG GGTCTCAGTAACCCTAACGCGCCTCCCAGCTTCTTGTTCTGTGGTCCCTCCGGTACCGGTAAGACACTGCTCACA AAAGCGCTTGCCGAATTCCTGTTCGATGATCCCAAGGCAATGATCCGGTTCGATATGTCCGAGTACCAAGAGCGA CACTCGCTCAGCCGTATGATCGGTGCACCCCCCGGATACGTTGGCCACGACGCCGGTGGCCAACTTACCGAAAGC CTGCGTCGCCGCCCATTCTCGATCTTGCTCTTCGATGAGGTCGAGAAGGCCGCAAAGGAAGTCCTCACTGTCCTC CTACAGCTTATGGATGATGGCCGTATCACCGACGGCCAGGGCCGTGTCGTCGACGCAAAGAACTGCATCGTCGTC ATGACCTCCAACTTGGGTGCTCAATATCTCTCCCGCCCGACTACCAAGGACGGTCGCATCGAGCCCCAGACCCGC GAGTTGGTGATGAACGCTCTGCGCGACTACTTCCTGCCGGAGTTCCTTAACCGTATCTCCAGCACCGTCATCTTC AACCGTCTCACAAGGCGGGAGATTCGCAAGATTGTGGACCTCCGTCTTTCCGAGGTGCAGAAGCGGCTCGACAAC AACGAGCGCAATGTTACTATCGAATGTAGCGACGAAGTCAAGGACTACCTCGGCGCAGCAGGCTACTCCCCAGCC TATGGTGCTCGTCCCTTGGGCCGACTCATCGAGCGCGAAATCCTCAACCGTCTTGCTGTGCTCATTCTGCGCGGA AGTATCAAGGATGGCGAGGTCGCCCATGTCGTCATGCGCGACAGTCGCATCGATGTCTTGCCTAACCACGATCTT GGCGAGGCTAGTGAGATGAGCGATGATGAAATGATGGACGAGGATGATCTTGACGCTGAGATGGCTGATAACCCC GTCTCGCCTGATCTGTACGATTAA |
Transcript | >Pro_DTO377G3_2|g3916.t1 ATGAACGGCGTCCAATTCACAGATCGGGCCAACAAGGCCCTGCTGGACTCCAGCGGGCTCTGCGAGCAATATGCA CACTCCCAGATCATGCCTCTTCACTTGGCAGTCGCATTGCTCAACCCCTCCCCAGATGAGTCTCAAGATCAACAG ACTCCTTCTGGTGCCCACGCATCCCACGATTCCGCAGCCGCCCCTCTCTTCCGCCAGGTCGTTGAACGAGCCCAC GGCGACCCTCAACTCCTCGACCGATCGCTAATGAAGCTATTGGTCCGCCTGCCCAGTCAAGATCCCCCTCCAGAG AACCCCAGTGTTTCTCCCCAACTCTCTAAAGTCATTCGGGCAGCCACCGATTTGTCGAAAACACAAAAGGACAGC TTCGTCGCAGTTGATCATCTCATTCAGTCTGTTTGCCAGGATTCACAAGTTCAGCGTGCGCTAGGCGATGCCAAT ATTCCCAATCTCAAGTTGATCGACACTGCTATCCAGCAAATTCGCGGTACAAAGCGGGTCGATTCCAAGACCGCC GATGCCGAGGGCGAGAATGAAAACCTGAAGAAGTTCACCATTGATATGACTGCCTTGGCTCGTGAGGGCAAGATC GATCCGGTCATTGGCCGAGAGGAGGAAATCCGCCGTGTCATTCGTATTCTCAGTCGCCGCACGAAGAACAACCCT GTGCTTATTGGTGAGCCTGGTGTCGGTAAGACCACCATTGTCGAAGGCCTCGCTCGCCGTATTGTCAACGCCGAT ATCCCTGCCAACCTCGCTCAGTGCCGTCTTCTTTCTCTTGATGTCGGTTCTCTGGTTGCGGGCAGCAAATACCGC GGTGAATTCGAAGAACGTATGAAGGGTGTCCTCAAGGAAATCGAAGATTCCAAGGATACCATTCTCCTCTTCGTC GATGAGATCCACCTGCTTATGGGCGCTGGTTCTAGCGGCGAAGGCGGTATGGACGCTGCCAACCTTCTCAAGCCC ATGCTGGCTCGTGGCCAATTGCATTGTATTGGTGCCACGACTCTCTCTGAATACCGCAAGTATATCGAGAAGGAT CAGGCTTTCGAGCGACGATTCCAGCAAGTCCTTGTCAAGGAGCCTACAGTCCCAGAAACCATCTCTATTCTTCGT GGTCTGAAGGAAAAATACGAGGCTCACCACGGTGTCAACATTCTCGATGGAGCCATCGTCGCTGCCGCCACTCTC GCATCTCGCTACCTGACAGCTCGTCGACTCCCCGATTCTGCGGTCGATTTGATTGATGAGGCTGCGGCTGCAGTC CGAGTCACTCGCGAGTCCGAGCCAGAAGCCCTCGACACACTGGAAAGAAAGGCCCGCCAGCTTCAAATTGAAATT CACGCCCTTGGCCGTGAGCAAGACGAAGCATCCAAGGCTCGTCTCGAGGCCGCCAAGCAGGAAGCTGCCAATGTT GGCGAGGAGCTTCGGCCGATGCGCGAGAAGTACGAAAATGAGAAGCAGCGCAGCCGCGAAGTTCAGGAGGCCAAG ATCAAGCTGGATTCTCTCAAGGTCAAGCGTGACGAAGCCGAACGATTGGGCGATACCCAGACAGCCGCTGATCTC GAATACTACGCCATCCCGGAAACCAAAGCTCTCATCGAGCGTCTGGAGACTGAGCGGGCCAAGGCTGATGCTGAA CGCCGCGCTCAAGCGGGCGACTCTGGTGAAGCACTCCTTGCCGATGCAGTTGGTCCCGATCAAATCAATGAAATC GTTGGCCGCTGGACCGGTATTCCTGTTAACAGACTCAAGACCACTGAAAAGGACAAGCTGCTTAACATGGAGAAA TACCTTTCCAAGGTTGTTGTTGGTCAGAAGGAAGCTGTTGTTTCGGTCTCTAACGCCATTCGCTTGCAGCGCTCG GGTCTCAGTAACCCTAACGCGCCTCCCAGCTTCTTGTTCTGTGGTCCCTCCGGTACCGGTAAGACACTGCTCACA AAAGCGCTTGCCGAATTCCTGTTCGATGATCCCAAGGCAATGATCCGGTTCGATATGTCCGAGTACCAAGAGCGA CACTCGCTCAGCCGTATGATCGGTGCACCCCCCGGATACGTTGGCCACGACGCCGGTGGCCAACTTACCGAAAGC CTGCGTCGCCGCCCATTCTCGATCTTGCTCTTCGATGAGGTCGAGAAGGCCGCAAAGGAAGTCCTCACTGTCCTC CTACAGCTTATGGATGATGGCCGTATCACCGACGGCCAGGGCCGTGTCGTCGACGCAAAGAACTGCATCGTCGTC ATGACCTCCAACTTGGGTGCTCAATATCTCTCCCGCCCGACTACCAAGGACGGTCGCATCGAGCCCCAGACCCGC GAGTTGGTGATGAACGCTCTGCGCGACTACTTCCTGCCGGAGTTCCTTAACCGTATCTCCAGCACCGTCATCTTC AACCGTCTCACAAGGCGGGAGATTCGCAAGATTGTGGACCTCCGTCTTTCCGAGGTGCAGAAGCGGCTCGACAAC AACGAGCGCAATGTTACTATCGAATGTAGCGACGAAGTCAAGGACTACCTCGGCGCAGCAGGCTACTCCCCAGCC TATGGTGCTCGTCCCTTGGGCCGACTCATCGAGCGCGAAATCCTCAACCGTCTTGCTGTGCTCATTCTGCGCGGA AGTATCAAGGATGGCGAGGTCGCCCATGTCGTCATGCGCGACAGTCGCATCGATGTCTTGCCTAACCACGATCTT GGCGAGGCTAGTGAGATGAGCGATGATGAAATGATGGACGAGGATGATCTTGACGCTGAGATGGCTGATAACCCC GTCTCGCCTGATCTGTACGATTAA |
Gene | >Pro_DTO377G3_2|g3916.t1 ATGAACGGCGTCCAATTCACAGATCGGGCCAACAAGGCCCTGCTGGACTCCAGCGGGCTCTGCGAGCAATATGCA CACTCCCAGATCATGCCTCTTCACTTGGCAGTCGCATTGCTCAACCCCTCCCCAGATGAGTCTCAAGATCAACAG ACTCCTTCTGGTGCCCACGCATCCCACGATTCCGCAGCCGCCCCTCTCTTCCGCCAGGTCGTTGAACGAGCCCAC GGCGACCCTCAACTCCTCGACCGATCGCTAATGAAGCTATTGGTCCGCCTGCCCAGTCAAGATCCCCCTCCAGAG AACCCCAGTGTTTCTCCCCAACTCTCTAAAGTCATTCGGGCAGCCACCGATTTGTCGAAAACACAAAAGGACAGC TTCGTCGCAGTTGATCATCTCATTCAGTCTGTTTGCCAGGATTCACAAGTTCAGCGTGCGCTAGGCGATGCCAAT ATTCCCAATCTCAAGTTGATCGACACTGCTATCCAGCAAATTCGCGGTACAAAGCGGGTCGATTCCAAGACCGCC GATGCCGAGGGCGAGAATGAAAACCTGAAGAAGTTCACCATTGATATGACTGCCTTGGCTCGTGAGGGCAAGATC GATCCGGTCATTGGCCGAGAGGAGGAAATCCGCCGTGTCATTCGTATTCTCAGTCGCCGCACGAAGAACAACCCT GTGCTTATTGGTGAGCCTGGTGTCGGTAAGACCACCATTGTCGAAGGCCTCGCTCGCCGTATTGTCAACGCCGAT ATCCCTGCCAACCTCGCTCAGTGCCGTCTTCTTTCTCTTGATGTCGGTTCTCTGGTTGCGGGCAGCAAATACCGC GGTGAATTCGAAGAACGTATGAAGGGTGTCCTCAAGGAAATCGAAGATTCCAAGGATACCATTCTCCTCTTCGTC GATGAGATCCACCTGCTTATGGGCGCTGGTTCTAGCGGCGAAGGCGGTATGGACGCTGCCAACCTTCTCAAGCCC ATGCTGGCTCGTGGCCAATTGCATTGTATTGGTGCCACGACTCTCTCTGAATACCGCAAGTATATCGAGAAGGAT CAGGCTTTCGAGCGACGATTCCAGCAAGTCCTTGTCAAGGAGCCTACAGTCCCAGAAACCATCTCTATTCTTCGT GGTCTGAAGGAAAAATACGAGGCTCACCACGGTGTCAACATTCTCGATGGAGCCATCGTCGCTGCCGCCACTCTC GCATCTCGCTACCTGACAGCTCGTCGACTCCCCGATTCTGCGGTCGATTTGATTGATGAGGCTGCGGCTGCAGTC CGAGTCACTCGCGAGTCCGAGCCAGAAGCCCTCGACACACTGGAAAGAAAGGCCCGCCAGCTTCAAATTGAAATT CACGCCCTTGGCCGTGAGCAAGACGAAGCATCCAAGGCTCGTCTCGAGGCCGCCAAGCAGGAAGCTGCCAATGTT GGCGAGGAGCTTCGGCCGATGCGCGAGAAGTACGAAAATGAGAAGCAGCGCAGCCGCGAAGTTCAGGAGGCCAAG ATCAAGCTGGATTCTCTCAAGGTCAAGCGTGACGAAGCCGAACGATTGGGCGATACCCAGACAGCCGCTGATCTC GAATACTACGCCATCCCGGAAACCAAAGCTCTCATCGAGCGTCTGGAGACTGAGCGGGCCAAGGCTGATGCTGAA CGCCGCGCTCAAGCGGGCGACTCTGGTGAAGCACTCCTTGCCGATGCAGTTGGTCCCGATCAAATCAATGAAATC GTTGGCCGCTGGACCGGTATTCCTGTTAACAGACTCAAGACCACTGAAAAGGACAAGCTGCTTAACATGGAGAAA TACCTTTCCAAGGTTGTTGTTGGTCAGAAGGAAGCTGTTGTTTCGGTCTCTAACGCCATTCGCTTGCAGCGCTCG GGTCTCAGTAACCCTAACGCGCCTCCCAGCTTCTTGTTCTGTGGTCCCTCCGGTACCGGTAAGACACTGCTCACA AAAGCGCTTGCCGAATTCCTGTTCGATGATCCCAAGGCAATGATCCGGTTCGATATGTCCGAGTACCAAGAGCGA CACTCGCTCAGCCGTATGATCGGTGCACCCCCCGGATACGTTGGCCACGACGCCGGTGGCCAACTTACCGAAAGC CTGCGTCGCCGCCCATTCTCGATCTTGCTCTTCGATGAGGTCGAGAAGGCCGCAAAGGAAGTCCTCACTGTCCTC CTACAGCTTATGGATGATGGCCGTATCACCGACGGCCAGGGCCGTGTCGTCGACGCAAAGAACTGCATCGTCGTC ATGACCTCCAACTTGGGTGCTCAATATCTCTCCCGCCCGACTACCAAGGACGGTCGCATCGAGCCCCAGACCCGC GAGTTGGTGATGAACGCTCTGCGCGACTACTTCCTGCCGGAGTTCCTTAACCGTATCTCCAGCACCGTCATCTTC AACCGTCTCACAAGGCGGGAGATTCGCAAGATTGTGGACCTCCGTCTTTCCGAGGTGCAGAAGCGGCTCGACAAC AACGAGCGCAATGTTACTATCGAATGTAGCGACGAAGTCAAGGACTACCTCGGCGCAGCAGGCTACTCCCCAGCC TATGGTGCTCGTCCCTTGGGCCGACTCATCGAGCGCGAAATCCTCAACCGTCTTGCTGTGCTCATTCTGCGCGGA AGTATCAAGGATGGCGAGGTCGCCCATGTCGTCATGCGCGACAGTCGCATCGATGTCTTGCCTAACCACGATCTT GGCGAGGCTAGTGAGATGAGCGATGATGAAATGATGGACGAGGATGATCTTGACGCTGAGATGGCTGATAACCCC GTCTCGCCTGATCTGTACGATTAA |