Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3909.t1
Gene name
Locationscaffold_07:234733..235652
Strand+
Gene length (bp)919
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.2E-39 21 232
PF00106 adh_short short chain dehydrogenase 1.7E-41 15 216
PF08659 KR KR domain 9.4E-16 18 194
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.3E-05 17 190

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3909.t1
MGSIQGPFPRIYEGKLALVTGSARSIGAAIVENLASKGCNVIINYATEGSDESAAVLATKLQKEYSVRALPIRAD
ITSREECARIVSSAKEHFTNSETGSFQIDIIVHNAAVLYLGPLESVKESEFRRIYEVNVLGPLLLTGACKEYLPT
DRSGRIVMLSSIASKTGTENTSLYSGTKGAIEAMTRVWCRELAERATVNSINPGPVMTDMYMSAPDEVKEGLAHW
NPLTPLVAVRDTDSPEVQELGRKFGGRAAYAEEIAGLIATICNPEFGWCTGSVISANGGLSFST*
Coding >Pro_DTO377G3_2|g3909.t1
ATGGGTAGTATTCAAGGCCCATTCCCTCGCATATACGAGGGCAAACTCGCTCTCGTAACAGGATCCGCACGTAGC
ATTGGAGCTGCTATAGTCGAGAACCTGGCCAGCAAGGGCTGCAATGTGATCATCAACTATGCGACCGAGGGCTCC
GACGAGTCCGCAGCAGTACTCGCCACCAAACTCCAAAAGGAATACTCAGTGCGCGCTCTGCCCATTCGAGCAGAC
ATTACCTCGCGGGAGGAATGCGCACGAATTGTATCCAGCGCAAAAGAACATTTCACCAACTCGGAAACAGGATCT
TTCCAAATCGACATCATCGTTCACAACGCCGCGGTGTTATACCTTGGCCCATTGGAATCGGTCAAAGAATCCGAA
TTCCGTCGAATCTATGAAGTGAATGTTCTTGGGCCACTTTTACTTACCGGTGCCTGCAAGGAGTATCTTCCCACC
GATCGCTCGGGGCGTATTGTGATGCTATCGAGTATTGCATCGAAGACGGGGACGGAGAACACTTCGCTTTACTCG
GGCACCAAGGGCGCCATTGAGGCCATGACACGTGTGTGGTGTCGTGAGCTGGCCGAGAGAGCCACCGTCAACTCA
ATCAACCCTGGTCCGGTCATGACGGATATGTATATGTCTGCACCTGATGAGGTCAAGGAGGGGCTTGCGCATTGG
AATCCTCTCACGCCGTTGGTGGCTGTTCGGGATACTGATAGCCCGGAGGTGCAGGAGTTGGGTAGGAAGTTTGGA
GGAAGAGCGGCGTATGCGGAGGAGATTGCTGGGTTGATTGCCACGATCTGTAATCCGGAGTTTGGGTGGTGTACT
GGAAGTGTCATTTCTGCAAATGGAGGGTTGTCCTTTAGTACCTAA
Transcript >Pro_DTO377G3_2|g3909.t1
ATGGGTAGTATTCAAGGCCCATTCCCTCGCATATACGAGGGCAAACTCGCTCTCGTAACAGGATCCGCACGTAGC
ATTGGAGCTGCTATAGTCGAGAACCTGGCCAGCAAGGGCTGCAATGTGATCATCAACTATGCGACCGAGGGCTCC
GACGAGTCCGCAGCAGTACTCGCCACCAAACTCCAAAAGGAATACTCAGTGCGCGCTCTGCCCATTCGAGCAGAC
ATTACCTCGCGGGAGGAATGCGCACGAATTGTATCCAGCGCAAAAGAACATTTCACCAACTCGGAAACAGGATCT
TTCCAAATCGACATCATCGTTCACAACGCCGCGGTGTTATACCTTGGCCCATTGGAATCGGTCAAAGAATCCGAA
TTCCGTCGAATCTATGAAGTGAATGTTCTTGGGCCACTTTTACTTACCGGTGCCTGCAAGGAGTATCTTCCCACC
GATCGCTCGGGGCGTATTGTGATGCTATCGAGTATTGCATCGAAGACGGGGACGGAGAACACTTCGCTTTACTCG
GGCACCAAGGGCGCCATTGAGGCCATGACACGTGTGTGGTGTCGTGAGCTGGCCGAGAGAGCCACCGTCAACTCA
ATCAACCCTGGTCCGGTCATGACGGATATGTATATGTCTGCACCTGATGAGGTCAAGGAGGGGCTTGCGCATTGG
AATCCTCTCACGCCGTTGGTGGCTGTTCGGGATACTGATAGCCCGGAGGTGCAGGAGTTGGGTAGGAAGTTTGGA
GGAAGAGCGGCGTATGCGGAGGAGATTGCTGGGTTGATTGCCACGATCTGTAATCCGGAGTTTGGGTGGTGTACT
GGAAGTGTCATTTCTGCAAATGGAGGGTTGTCCTTTAGTACCTAA
Gene >Pro_DTO377G3_2|g3909.t1
ATGGGTAGTATTCAAGGCCCATTCCCTCGCATATACGAGGGCAAACTCGCTCTCGTAACAGGATCCGCACGTAGT
AAGTCCGAAAGAGACTCATTTGGCATCCAATACTCATCATCTTCCAGGCATTGGAGCTGCTATAGTCGAGAACCT
GGCCAGCAAGGGCTGCAATGTGATCATCAACTATGCGACCGAGGGCTCCGACGAGTCCGCAGCAGTACTCGCCAC
CAAACTCCAAAAGGAATACTCAGTGCGCGCTCTGCCCATTCGAGCAGACATTACCTCGCGGGAGGAATGCGCACG
AATTGTATCCAGCGCAAAAGAACATTTCACCAACTCGGAAACAGGATCTTTCCAAATCGACATCATCGTTCACAA
CGCCGCGGTGTTATACCTTGGCCCATTGGAATCGGTCAAAGAATCCGAATTCCGTCGAATCTATGAAGTGAATGT
TCTTGGGCCACTTTTACTTACCGGTGCCTGCAAGGAGTATCTTCCCACCGATCGCTCGGGGCGTATTGTGATGCT
ATCGAGTATTGCATCGAAGACGGGGACGGAGAACACTTCGCTTTACTCGGGCACCAAGGGCGCCATTGAGGCCAT
GACACGTGTGTGGTGTCGTGAGCTGGCCGAGAGAGCCACCGTCAACTCAATCAACCCTGGTCCGGTCATGACGGA
TATGTATATGTCTGCACCTGATGAGGTCAAGGAGGGGCTTGCGCATTGGAATCCTCTCACGCCGTTGGTGGCTGT
TCGGGATACTGATAGCCCGGAGGTGCAGGAGTTGGGTAGGAAGTTTGGAGGAAGAGCGGCGTATGCGGAGGAGAT
TGCTGGGTTGATTGCCACGATCTGTAATCCGGAGTTTGGGTGGTGTACTGGAAGTGTCATTTCTGCAAATGGAGG
GTTGTCCTTTAGTACCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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