Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3908.t1
Gene name
Locationscaffold_07:232100..232935
Strand+
Gene length (bp)835
Transcript length (bp)789
Coding sequence length (bp)789
Protein length (aa) 263

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 7.0E-63 21 258
PF00106 adh_short short chain dehydrogenase 5.3E-53 15 204
PF08659 KR KR domain 1.1E-10 18 183

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3908.t1
MDVPEAPIFPLLEGKVAIITGGAQGMGKATASVFLRAGAKVVIADLKEEQGAQVAEELSSLGEVRFVKTDISKSE
DVQNLIKETVSAFGKLDVAINNAAMTPDQTPLIGFDESYWRRLVDINLTGTALCCKYQMQQMEKQGTKGSIVNIA
SINAYSPQPNMPAYTATKHALLGLTKHAATEGGPKGIRVNAIAPGAIFSDMSAAALEIMGTTHDEFAPKVSSLNR
FGQAHEVAQGSLWLASDCSSYVNGICIPIDGGFLAKW*
Coding >Pro_DTO377G3_2|g3908.t1
ATGGATGTCCCGGAAGCGCCTATCTTTCCCCTCCTTGAAGGCAAGGTTGCCATCATCACAGGAGGCGCCCAAGGC
ATGGGCAAGGCTACCGCGTCTGTGTTCCTCCGGGCAGGGGCCAAGGTAGTCATTGCCGATCTGAAGGAAGAGCAA
GGAGCTCAGGTTGCAGAAGAGCTTTCCTCTCTGGGAGAAGTCCGTTTTGTGAAGACCGACATCTCCAAGTCAGAG
GATGTACAAAACCTCATTAAGGAGACCGTCAGCGCATTCGGCAAATTGGACGTGGCGATCAACAACGCAGCCATG
ACTCCCGATCAGACTCCCCTGATCGGTTTCGACGAGTCATATTGGCGCAGATTGGTTGATATCAATTTGACCGGT
ACCGCGCTGTGCTGTAAATATCAGATGCAGCAAATGGAAAAGCAGGGCACAAAGGGCTCGATTGTCAATATTGCT
TCAATCAATGCCTATTCACCGCAGCCAAATATGCCAGCATACACGGCAACTAAGCATGCACTCCTGGGCTTGACC
AAGCATGCAGCGACTGAAGGTGGCCCGAAGGGTATCCGAGTTAACGCCATTGCGCCTGGAGCGATCTTCAGTGAT
ATGTCGGCCGCAGCGTTGGAGATTATGGGCACCACCCATGATGAGTTTGCGCCCAAGGTTAGCAGCTTGAACAGA
TTCGGACAGGCCCATGAGGTAGCGCAGGGGTCGCTTTGGCTTGCATCTGACTGTTCGTCGTACGTAAACGGAATT
TGTATTCCCATTGATGGAGGATTCCTGGCCAAATGGTAG
Transcript >Pro_DTO377G3_2|g3908.t1
ATGGATGTCCCGGAAGCGCCTATCTTTCCCCTCCTTGAAGGCAAGGTTGCCATCATCACAGGAGGCGCCCAAGGC
ATGGGCAAGGCTACCGCGTCTGTGTTCCTCCGGGCAGGGGCCAAGGTAGTCATTGCCGATCTGAAGGAAGAGCAA
GGAGCTCAGGTTGCAGAAGAGCTTTCCTCTCTGGGAGAAGTCCGTTTTGTGAAGACCGACATCTCCAAGTCAGAG
GATGTACAAAACCTCATTAAGGAGACCGTCAGCGCATTCGGCAAATTGGACGTGGCGATCAACAACGCAGCCATG
ACTCCCGATCAGACTCCCCTGATCGGTTTCGACGAGTCATATTGGCGCAGATTGGTTGATATCAATTTGACCGGT
ACCGCGCTGTGCTGTAAATATCAGATGCAGCAAATGGAAAAGCAGGGCACAAAGGGCTCGATTGTCAATATTGCT
TCAATCAATGCCTATTCACCGCAGCCAAATATGCCAGCATACACGGCAACTAAGCATGCACTCCTGGGCTTGACC
AAGCATGCAGCGACTGAAGGTGGCCCGAAGGGTATCCGAGTTAACGCCATTGCGCCTGGAGCGATCTTCAGTGAT
ATGTCGGCCGCAGCGTTGGAGATTATGGGCACCACCCATGATGAGTTTGCGCCCAAGGTTAGCAGCTTGAACAGA
TTCGGACAGGCCCATGAGGTAGCGCAGGGGTCGCTTTGGCTTGCATCTGACTGTTCGTCGTACGTAAACGGAATT
TGTATTCCCATTGATGGAGGATTCCTGGCCAAATGGTAG
Gene >Pro_DTO377G3_2|g3908.t1
ATGGATGTCCCGGAAGCGCCTATCTTTCCCCTCCTTGAAGGCAAGGTTGCCATCATCACAGGAGGCGCCCAAGGC
ATGGGCAAGGCTACCGCGTCTGTGTTCCTCCGGGCAGGGGCCAAGGTAGTCATTGCCGATCTGAAGGAAGAGCAA
GGAGCTCAGGTTGCAGAAGAGCTTTCCTCTCTGGGAGAAGTCCGTTTTGTGAAGACCGACATCTCCAAGTCAGAG
GATGTACAAAACCTCATTAAGGAGACCGTCAGCGCATTCGGCAAATTGGACGTGGCGATCAACAACGCAGCCATG
ACTCCCGATCAGACTCCCCTGATCGGTTTCGACGAGTCATATTGGCGCAGATTGGTTGATATCAATTTGACCGGT
ACCGCGCTGTGCTGTAAATATCAGATGCAGCAAATGGAAAAGCAGGGCACAAAGGGCTCGATTGTCAATATTGCT
TCAATCAATGCCTATTCACCGCAGCCAAATATGCCAGCATACACGGCAACTAAGCATGCACTCCTGGGCTTGACC
AAGCATGCAGCGACTGAAGGTGGCCCGAAGGGTATCCGAGTTAACGCCATTGCGCCTGGAGCGATCTTCGTATGT
TTTCCCCACCTTTAATCCAGGGAGGTTCTAACAATAGCAGAGTGATATGTCGGCCGCAGCGTTGGAGATTATGGG
CACCACCCATGATGAGTTTGCGCCCAAGGTTAGCAGCTTGAACAGATTCGGACAGGCCCATGAGGTAGCGCAGGG
GTCGCTTTGGCTTGCATCTGACTGTTCGTCGTACGTAAACGGAATTTGTATTCCCATTGATGGAGGATTCCTGGC
CAAATGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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