© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3876.t1 |
| Gene name | |
| Location | scaffold_07:151583..152754 |
| Strand | + |
| Gene length (bp) | 1171 |
| Transcript length (bp) | 978 |
| Coding sequence length (bp) | 978 |
| Protein length (aa) | 326 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05859 | Mis12 | Mis12 protein | 1.9E-46 | 8 | 161 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000278 | mitotic cell cycle | Yes |
| GO:0000775 | chromosome, centromeric region | Yes |
| GO:0005634 | nucleus | Yes |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0008150 | biological_process | No |
| GO:0098687 | chromosomal region | No |
| GO:0043226 | organelle | No |
| GO:0044464 | cell part | No |
| GO:0044446 | intracellular organelle part | No |
| GO:0007049 | cell cycle | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0044422 | organelle part | No |
| GO:0043229 | intracellular organelle | No |
| GO:0005575 | cellular_component | No |
| GO:0044427 | chromosomal part | No |
| GO:0044424 | intracellular part | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3876.t1 MDDATTSLLTEHFSYTPLSLIDDIINSINNLIYQAISSLESGLLNTPPERLGFSHDSSGPSIAETDEDGNVVYPE AKLEIENGLHQLETLLETNVDKAFDKFEIYVLRNILTVPGDLLSWVRLKHYEGLSFVSSPDTPTPETIHAQRKKL FETKKLNRSLKEERARNDAVISQLQSILSTVETAKVDGVSKTAEDIPVDLSFLTSSPAARQLRVGVDAGSNAKPT PLTTNTTFILSQLPALQTTLEQLRPKLAALPNATVQIEAKSKRDERKEYIESRIRLHLERAGQLAVGDDGNPVVA GRRIDIREAHALESVANMLTQDKSV* |
| Coding | >Pro_DTO377G3_2|g3876.t1 ATGGATGATGCAACGACCTCCTTGCTCACTGAGCACTTTAGTTACACACCCTTGTCTCTTATAGATGACATTATC AACTCGATCAACAATCTGATTTACCAGGCGATATCTAGCTTGGAGTCCGGCCTCCTCAATACGCCACCTGAACGG CTCGGTTTCTCCCATGACAGCAGTGGCCCCAGCATCGCGGAAACAGACGAGGATGGCAATGTGGTTTATCCCGAG GCGAAGCTAGAGATCGAGAATGGATTGCATCAGCTAGAGACGCTGCTGGAGACCAATGTTGATAAGGCCTTCGAC AAATTTGAGATCTATGTGCTGCGTAACATTCTCACGGTGCCCGGAGACTTGCTCTCTTGGGTGCGGTTGAAGCAC TACGAGGGTCTCTCTTTCGTATCTTCGCCAGACACACCGACGCCAGAAACCATACATGCGCAACGCAAGAAGTTG TTCGAGACAAAGAAACTAAACCGGTCGCTAAAAGAAGAACGCGCTCGAAATGATGCGGTCATATCACAGCTACAA TCTATCTTGTCGACAGTTGAAACAGCGAAGGTAGATGGTGTGTCCAAGACAGCGGAAGACATACCAGTGGATCTG TCCTTCTTGACCTCTAGCCCAGCTGCACGCCAGCTTCGTGTTGGTGTCGATGCTGGGTCGAATGCTAAACCCACA CCTCTTACAACCAACACTACTTTCATTCTCTCGCAGCTGCCCGCGTTGCAGACGACACTTGAACAGCTCCGACCG AAATTGGCAGCCCTGCCCAATGCAACGGTACAAATTGAAGCCAAGTCTAAGAGAGATGAGAGAAAGGAATATATC GAGAGCAGAATTCGACTCCATCTCGAGCGAGCTGGTCAGCTTGCTGTGGGTGATGATGGAAATCCAGTGGTCGCA GGTCGCAGAATCGACATCAGAGAGGCCCACGCCCTTGAAAGCGTGGCAAACATGCTTACGCAAGACAAATCTGTG TAA |
| Transcript | >Pro_DTO377G3_2|g3876.t1 ATGGATGATGCAACGACCTCCTTGCTCACTGAGCACTTTAGTTACACACCCTTGTCTCTTATAGATGACATTATC AACTCGATCAACAATCTGATTTACCAGGCGATATCTAGCTTGGAGTCCGGCCTCCTCAATACGCCACCTGAACGG CTCGGTTTCTCCCATGACAGCAGTGGCCCCAGCATCGCGGAAACAGACGAGGATGGCAATGTGGTTTATCCCGAG GCGAAGCTAGAGATCGAGAATGGATTGCATCAGCTAGAGACGCTGCTGGAGACCAATGTTGATAAGGCCTTCGAC AAATTTGAGATCTATGTGCTGCGTAACATTCTCACGGTGCCCGGAGACTTGCTCTCTTGGGTGCGGTTGAAGCAC TACGAGGGTCTCTCTTTCGTATCTTCGCCAGACACACCGACGCCAGAAACCATACATGCGCAACGCAAGAAGTTG TTCGAGACAAAGAAACTAAACCGGTCGCTAAAAGAAGAACGCGCTCGAAATGATGCGGTCATATCACAGCTACAA TCTATCTTGTCGACAGTTGAAACAGCGAAGGTAGATGGTGTGTCCAAGACAGCGGAAGACATACCAGTGGATCTG TCCTTCTTGACCTCTAGCCCAGCTGCACGCCAGCTTCGTGTTGGTGTCGATGCTGGGTCGAATGCTAAACCCACA CCTCTTACAACCAACACTACTTTCATTCTCTCGCAGCTGCCCGCGTTGCAGACGACACTTGAACAGCTCCGACCG AAATTGGCAGCCCTGCCCAATGCAACGGTACAAATTGAAGCCAAGTCTAAGAGAGATGAGAGAAAGGAATATATC GAGAGCAGAATTCGACTCCATCTCGAGCGAGCTGGTCAGCTTGCTGTGGGTGATGATGGAAATCCAGTGGTCGCA GGTCGCAGAATCGACATCAGAGAGGCCCACGCCCTTGAAAGCGTGGCAAACATGCTTACGCAAGACAAATCTGTG TAA |
| Gene | >Pro_DTO377G3_2|g3876.t1 ATGGATGATGCAACGACCTCCTTGCTCACTGAGCACTTTAGTTACACACCCTTGGTAAGCCTATCGAGACTGATA CGCATGGACTCGTGCTGCATGCGCGACCTACGAGTTGCGACTCCGGACCCACCCCTTGCAACTAGGAATATCGCT GACAGCTCCCTAGTCTCTTATAGATGACATTATCAACTCGATCAACAATCTGATTTACCAGGCGATATCTAGCTT GGAGTCCGGCCTCCTCAATACGCCACCTGAACGGCTCGGTTTCTCCCATGACAGCAGTGGCCCCAGCATCGCGGA AACAGACGAGGATGGCAATGTGGTTTATCCCGAGGCGAAGCTAGAGATCGAGAATGGATTGCATCAGCTAGAGAC GCTGCTGGAGACCAATGTTGATAAGGCCTTCGACAAATTTGAGATCTATGTGCTGCGTAACATTCTCACGGTGCC CGGAGACTTGCTCTCTTGGGTGCGGTTGAAGCACTACGAGGTATGTGGAGGCTTTCACAGTTGTCTAGACCTGAA CCTGCTTGCTGTTTTGTAATAAGGGATATACTAATGCGCCTTGTGCTAGGGTCTCTCTTTCGTATCTTCGCCAGA CACACCGACGCCAGAAACCATACATGCGCAACGCAAGAAGTTGTTCGAGACAAAGAAACTAAACCGGTCGCTAAA AGAAGAACGCGCTCGAAATGATGCGGTCATATCACAGCTACAATCTATCTTGTCGACAGTTGAAACAGCGAAGGT AGATGGTGTGTCCAAGACAGCGGAAGACATACCAGTGGATCTGTCCTTCTTGACCTCTAGCCCAGCTGCACGCCA GCTTCGTGTTGGTGTCGATGCTGGGTCGAATGCTAAACCCACACCTCTTACAACCAACACTACTTTCATTCTCTC GCAGCTGCCCGCGTTGCAGACGACACTTGAACAGCTCCGACCGAAATTGGCAGCCCTGCCCAATGCAACGGTACA AATTGAAGCCAAGTCTAAGAGAGATGAGAGAAAGGAATATATCGAGAGCAGAATTCGACTCCATCTCGAGCGAGC TGGTCAGCTTGCTGTGGGTGATGATGGAAATCCAGTGGTCGCAGGTCGCAGAATCGACATCAGAGAGGCCCACGC CCTTGAAAGCGTGGCAAACATGCTTACGCAAGACAAATCTGTGTAA |