Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3872.t1
Gene name
Locationscaffold_07:146760..147935
Strand+
Gene length (bp)1175
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01187 MIF Macrophage migration inhibitory factor (MIF) 3.2E-08 125 235

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3872.t1
MGSSKKKPSLPRLTTNIPLLQKPTNASCNTLLPKTLPDASVPPIIMPERPARTSSLFKEDKHDEENIVPVTRFAS
ESMPVYLPQKSVDDSPVTKMKKLYYEDAFTARGSHNSPKDRVTHESVVVVELKTNTKPKDNISKLLSDFAHSLAQ
VYQRPETSMLVTIDQNADLLFGTTSGSAYLLKVTALSSLIGPLTNLRNTGLIQSIIQEMFGIAPDKGVVIYMPAS
EDNIATNGTTARSEIDRLERINSSNNSSIFKSLSRSMSRRMKSSSGNSIPISLTSVLSPDVATPTSTSPMAFASD
QAPPLRPNQADDKKPIQSPNGERTQQVSSKDEKPERALKKRESLKSFVNRRLGELGELTTMKPFTDTKGKKD*
Coding >Pro_DTO377G3_2|g3872.t1
ATGGGCTCTTCTAAGAAGAAGCCGTCTTTACCTCGCTTGACCACCAACATTCCCCTACTACAGAAACCAACCAAT
GCATCATGCAATACTTTGCTACCCAAGACCCTTCCGGATGCCAGTGTACCCCCGATCATCATGCCAGAGAGGCCG
GCAAGAACCTCATCACTTTTCAAGGAGGACAAGCACGATGAGGAGAATATCGTGCCCGTCACGCGTTTTGCGTCA
GAGAGCATGCCTGTCTATCTTCCCCAGAAAAGTGTGGACGATTCGCCGGTAACAAAGATGAAGAAATTGTACTAC
GAAGATGCATTTACGGCTCGTGGATCGCACAACTCCCCCAAGGACCGTGTGACCCATGAATCGGTGGTTGTCGTT
GAGCTCAAGACCAACACCAAGCCAAAGGATAATATATCCAAGTTACTGTCGGATTTCGCCCACTCCCTTGCTCAG
GTCTACCAGCGCCCGGAGACATCAATGCTAGTCACCATTGACCAGAACGCTGACTTGCTTTTTGGAACTACCTCC
GGTTCTGCATATCTCTTGAAGGTTACTGCTCTCTCGAGTTTGATCGGACCCCTCACCAACCTCCGTAACACGGGC
CTAATCCAATCAATCATCCAGGAAATGTTTGGAATTGCGCCTGACAAAGGAGTGGTGATCTATATGCCCGCGAGT
GAAGACAATATTGCAACAAATGGGACGACCGCCAGGAGTGAGATCGACCGCCTCGAACGAATTAATTCCAGCAAT
AACTCTTCGATCTTCAAGTCTCTCTCGCGATCCATGAGTCGTCGCATGAAATCGAGCAGTGGAAACAGTATTCCG
ATTTCCCTCACTTCAGTTCTGAGTCCTGACGTCGCAACCCCTACTTCAACTTCTCCTATGGCTTTTGCTTCAGAT
CAGGCCCCTCCGCTGAGGCCAAACCAAGCAGACGACAAAAAGCCAATACAATCACCAAATGGGGAACGGACCCAG
CAGGTCTCATCCAAAGACGAGAAACCTGAACGAGCCTTAAAGAAGAGAGAGAGCTTGAAGAGTTTTGTTAACCGT
CGCTTGGGCGAGTTGGGCGAGCTGACTACAATGAAACCATTCACAGATACAAAGGGAAAGAAGGATTGA
Transcript >Pro_DTO377G3_2|g3872.t1
ATGGGCTCTTCTAAGAAGAAGCCGTCTTTACCTCGCTTGACCACCAACATTCCCCTACTACAGAAACCAACCAAT
GCATCATGCAATACTTTGCTACCCAAGACCCTTCCGGATGCCAGTGTACCCCCGATCATCATGCCAGAGAGGCCG
GCAAGAACCTCATCACTTTTCAAGGAGGACAAGCACGATGAGGAGAATATCGTGCCCGTCACGCGTTTTGCGTCA
GAGAGCATGCCTGTCTATCTTCCCCAGAAAAGTGTGGACGATTCGCCGGTAACAAAGATGAAGAAATTGTACTAC
GAAGATGCATTTACGGCTCGTGGATCGCACAACTCCCCCAAGGACCGTGTGACCCATGAATCGGTGGTTGTCGTT
GAGCTCAAGACCAACACCAAGCCAAAGGATAATATATCCAAGTTACTGTCGGATTTCGCCCACTCCCTTGCTCAG
GTCTACCAGCGCCCGGAGACATCAATGCTAGTCACCATTGACCAGAACGCTGACTTGCTTTTTGGAACTACCTCC
GGTTCTGCATATCTCTTGAAGGTTACTGCTCTCTCGAGTTTGATCGGACCCCTCACCAACCTCCGTAACACGGGC
CTAATCCAATCAATCATCCAGGAAATGTTTGGAATTGCGCCTGACAAAGGAGTGGTGATCTATATGCCCGCGAGT
GAAGACAATATTGCAACAAATGGGACGACCGCCAGGAGTGAGATCGACCGCCTCGAACGAATTAATTCCAGCAAT
AACTCTTCGATCTTCAAGTCTCTCTCGCGATCCATGAGTCGTCGCATGAAATCGAGCAGTGGAAACAGTATTCCG
ATTTCCCTCACTTCAGTTCTGAGTCCTGACGTCGCAACCCCTACTTCAACTTCTCCTATGGCTTTTGCTTCAGAT
CAGGCCCCTCCGCTGAGGCCAAACCAAGCAGACGACAAAAAGCCAATACAATCACCAAATGGGGAACGGACCCAG
CAGGTCTCATCCAAAGACGAGAAACCTGAACGAGCCTTAAAGAAGAGAGAGAGCTTGAAGAGTTTTGTTAACCGT
CGCTTGGGCGAGTTGGGCGAGCTGACTACAATGAAACCATTCACAGATACAAAGGGAAAGAAGGATTGA
Gene >Pro_DTO377G3_2|g3872.t1
ATGGGCTCTTCTAAGAAGAAGCCGTCTTTACCTCGCTTGACCACCAACATTCCCCTACTACAGAAACCAACCAAT
GCATCATGCAATACTTTGCTACCCAAGACCCTTCCGGATGCCAGTGTACCCCCGATCATCATGCCAGAGAGGCCG
GCAAGAACCTCATCACTTTTCAAGGAGGACAAGCACGATGAGGAGAATATCGTGCCCGTCACGCGTTTTGCGTCA
GAGAGCATGCCTGTCTATCTTCCCCAGAAAAGTGTGGACGATTCGCCGGTAACAAAGATGAAGAAATTGTACTAC
GAAGATGCATTTACGGCTCGTGGATCGCACAACTCCCCCAAGGACCGTGTGACCCATGAATCGGTGGTTGTCGTT
GAGCTCAAGACCAACACCAAGGTTTGTAACGTGCTGATATTCGCTCGGTGATTCCTCTATGCTAACTCACCAACT
AGCCAAAGGATAATATATCCAAGTTACTGTCGGATTTCGCCCACTCCCTTGCTCAGGTCTACCAGCGCCCGGAGA
CATCAATGCTAGTCACCATTGACCAGAACGCTGACTTGCTTTTTGGAACTACCTCCGGTTCTGCATATCTCTTGA
AGGTTACTGCTCTCTCGAGTTTGATCGGACCCCTCACCAACCTCCGTAACACGGGCCTAATCCAATCAATCATCC
AGGAAATGTTTGGAATTGCGCCTGACAAAGGAGTGGTGATCTATATGCCCGCGAGTGAAGACAATATTGCAACAA
ATGGGACGACCGCCAGGAGTGAGATCGACCGCCTCGAACGAATTAATTCCAGCAATAACTCTTCGATCTTCAAGT
CTCTCTCGCGATCCATGAGTCGTCGCATGAAATCGAGCAGTGGAAACAGTATTCCGATTTCCCTCACTTCAGTTC
TGAGTCCTGACGTCGCAACCCCTACTTCAACTTCTCCTATGGCTTTTGCTTCAGATCAGGCCCCTCCGCTGAGGC
CAAACCAAGCAGACGACAAAAAGCCAATACAATCACCAAATGGGGAACGGACCCAGCAGGTCTCATCCAAAGACG
AGAAACCTGAACGAGCCTTAAAGAAGAGAGAGAGCTTGAAGAGTTTTGTTAACCGTCGCTTGGGCGAGTTGGGCG
AGCTGACTACAATGAAACCATTCACAGATACAAAGGGAAAGAAGGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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