Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3866.t1
Gene name
Locationscaffold_07:128439..131231
Strand+
Gene length (bp)2792
Transcript length (bp)2211
Coding sequence length (bp)2211
Protein length (aa) 737

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.2E-01 223 252
PF01476 LysM LysM domain 2.9E-02 619 656
PF01476 LysM LysM domain 5.6E-05 689 733

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3866.t1
MAALRMVALLAALAVLLPLSWAQQFTGTQMFTNYTGLSTDCQQALATNVTCSPYLGIVSENNGVVTADQIEDVCV
DDCYSSLEAARSVIAAACTLDTDIIVVENVAYPATFIVDNYLFTYELSCRKDSTTGEYCDPLVALWSNQSLNTSQ
LCSDCWLGGLALELNSPFGYDSVVAVNYVSLLSSCNATTYTYATPTQYALNATATSEPATVITTPASSCTGSYEV
QVEDTCNSVAQALNVSTYSLLYLNNLDLYCLNWASTAVNSSLCIPPQCDTHVWQATDTCDSVVGGLSNVTIPQFL
AWNPNFNALCQNAVNYIDYMVCVGPPGGYLNHTTDISGNSTVQNPTSITSAVPAPTNALNGSTTDCGLWYTVGEG
DSCSLVTVANAISLVDLYFLNPEIDANCTNLELGEAYCIAAVGDISTYSGYPVTTPLFTVTTASFPAVDTSIPTA
TSDPGFVYIPIYLPTAPDTLTNCQRYANYDNTIYNLNSSTGSDNTSSSNSGLGSLCLSLNATESTTVSNCNCFTG
VNGYDKGEYQCADIEEDFDITEAQLLTWNPWLGTDCDTNLYANLNDTDTRAVCIGVGSSTSTTATTTPSSTTATA
TSVALTQTGYIYGCQEFFTVESGDDCSTMETEFGVTLAQLYEWNPSIGKTCTNLWLGYTYCVKGPTATASSSAGT
PTQTGIASNCNEYYTVVSGDSCAAVEGAFEITFAQLYEWNPVIGSDCQYLDVGYAICVGVS*
Coding >Pro_DTO377G3_2|g3866.t1
ATGGCAGCATTGCGGATGGTGGCGCTGTTGGCTGCCCTGGCGGTTCTCCTGCCTCTGTCCTGGGCGCAGCAATTC
ACTGGTACCCAGATGTTCACCAACTATACAGGCCTGAGTACAGACTGCCAGCAGGCATTGGCAACAAATGTGACA
TGCTCTCCGTATCTGGGTATTGTCTCGGAAAACAATGGCGTCGTGACAGCCGATCAGATCGAAGATGTGTGCGTT
GATGACTGCTATAGCTCTCTGGAGGCTGCCAGAAGCGTCATCGCGGCCGCTTGTACCCTCGACACAGATATCATC
GTTGTCGAGAACGTGGCATACCCGGCTACATTCATAGTGGATAACTATCTATTCACGTACGAGCTGTCCTGTCGA
AAAGACAGCACCACGGGTGAATACTGCGATCCCCTCGTGGCCTTATGGTCCAATCAGTCTCTCAATACTAGCCAG
CTGTGCTCCGACTGCTGGCTAGGAGGGCTTGCGCTGGAACTGAACAGTCCCTTCGGATATGATAGCGTTGTGGCT
GTGAACTACGTATCGCTGCTATCCAGCTGCAATGCGACCACGTATACCTATGCCACTCCGACACAATACGCACTA
AACGCCACAGCCACATCTGAACCGGCGACTGTAATAACAACTCCGGCATCGAGCTGCACAGGTTCTTATGAAGTA
CAAGTAGAGGATACCTGTAACTCGGTAGCTCAGGCTCTCAACGTGTCTACGTACAGTCTACTCTACCTGAATAAC
TTGGATCTCTATTGCCTGAATTGGGCTTCAACAGCGGTCAACTCGAGTCTGTGTATCCCACCACAATGTGATACC
CACGTGTGGCAGGCGACCGATACCTGTGACAGTGTGGTCGGTGGCTTGTCCAATGTCACTATTCCGCAATTCCTG
GCCTGGAACCCCAACTTCAATGCTTTGTGCCAGAACGCCGTCAATTATATTGACTATATGGTTTGCGTCGGTCCT
CCTGGAGGCTATCTTAATCATACCACCGATATATCAGGCAATTCTACAGTACAGAATCCAACAAGTATTACCTCC
GCTGTCCCTGCGCCTACCAACGCCCTAAATGGATCTACTACAGATTGTGGTCTATGGTATACAGTCGGAGAAGGG
GATAGTTGCAGTCTGGTTACTGTCGCCAATGCCATCTCCCTTGTGGACCTCTACTTCCTTAACCCAGAGATTGAC
GCCAATTGTACCAACCTTGAGCTCGGGGAGGCTTACTGTATCGCCGCAGTTGGAGATATTAGTACCTACTCTGGC
TACCCAGTCACAACGCCCTTATTCACTGTGACAACAGCCAGCTTCCCCGCCGTCGATACATCAATTCCCACAGCG
ACCAGTGATCCGGGGTTCGTCTATATACCAATATATCTCCCTACGGCCCCGGACACGCTTACTAACTGCCAACGA
TACGCCAACTATGATAATACCATATATAACCTCAACTCTTCAACCGGCAGTGACAATACCAGCAGCAGTAACAGC
GGACTTGGCTCTCTCTGCTTGTCCCTTAATGCTACCGAGTCTACCACTGTCTCAAACTGCAACTGCTTCACCGGT
GTCAATGGCTACGATAAAGGAGAATACCAATGTGCTGATATTGAGGAAGACTTCGATATCACAGAAGCCCAACTC
CTTACGTGGAACCCTTGGCTCGGCACAGACTGTGACACAAATCTGTACGCTAATCTTAACGATACCGATACTCGT
GCCGTCTGTATTGGGGTGGGTTCGAGCACGTCAACTACTGCCACCACAACCCCTAGTAGTACTACCGCTACTGCT
ACGTCGGTAGCCCTAACACAAACTGGATACATCTATGGGTGCCAGGAGTTCTTTACCGTTGAGTCGGGAGATGAT
TGTTCGACAATGGAGACTGAGTTTGGAGTTACTCTTGCCCAACTCTATGAGTGGAATCCCAGTATTGGAAAAACA
TGTACGAACCTTTGGCTCGGATATACCTACTGCGTCAAGGGTCCCACCGCCACGGCGAGTAGCTCAGCTGGTACG
CCTACACAGACTGGCATCGCGTCCAATTGCAACGAATATTATACAGTCGTTTCCGGGGACTCGTGCGCGGCGGTC
GAGGGTGCGTTCGAAATAACATTTGCGCAGCTGTACGAATGGAATCCGGTGATTGGGTCAGATTGTCAGTATTTG
GATGTTGGCTATGCCATTTGTGTTGGCGTTTCATAG
Transcript >Pro_DTO377G3_2|g3866.t1
ATGGCAGCATTGCGGATGGTGGCGCTGTTGGCTGCCCTGGCGGTTCTCCTGCCTCTGTCCTGGGCGCAGCAATTC
ACTGGTACCCAGATGTTCACCAACTATACAGGCCTGAGTACAGACTGCCAGCAGGCATTGGCAACAAATGTGACA
TGCTCTCCGTATCTGGGTATTGTCTCGGAAAACAATGGCGTCGTGACAGCCGATCAGATCGAAGATGTGTGCGTT
GATGACTGCTATAGCTCTCTGGAGGCTGCCAGAAGCGTCATCGCGGCCGCTTGTACCCTCGACACAGATATCATC
GTTGTCGAGAACGTGGCATACCCGGCTACATTCATAGTGGATAACTATCTATTCACGTACGAGCTGTCCTGTCGA
AAAGACAGCACCACGGGTGAATACTGCGATCCCCTCGTGGCCTTATGGTCCAATCAGTCTCTCAATACTAGCCAG
CTGTGCTCCGACTGCTGGCTAGGAGGGCTTGCGCTGGAACTGAACAGTCCCTTCGGATATGATAGCGTTGTGGCT
GTGAACTACGTATCGCTGCTATCCAGCTGCAATGCGACCACGTATACCTATGCCACTCCGACACAATACGCACTA
AACGCCACAGCCACATCTGAACCGGCGACTGTAATAACAACTCCGGCATCGAGCTGCACAGGTTCTTATGAAGTA
CAAGTAGAGGATACCTGTAACTCGGTAGCTCAGGCTCTCAACGTGTCTACGTACAGTCTACTCTACCTGAATAAC
TTGGATCTCTATTGCCTGAATTGGGCTTCAACAGCGGTCAACTCGAGTCTGTGTATCCCACCACAATGTGATACC
CACGTGTGGCAGGCGACCGATACCTGTGACAGTGTGGTCGGTGGCTTGTCCAATGTCACTATTCCGCAATTCCTG
GCCTGGAACCCCAACTTCAATGCTTTGTGCCAGAACGCCGTCAATTATATTGACTATATGGTTTGCGTCGGTCCT
CCTGGAGGCTATCTTAATCATACCACCGATATATCAGGCAATTCTACAGTACAGAATCCAACAAGTATTACCTCC
GCTGTCCCTGCGCCTACCAACGCCCTAAATGGATCTACTACAGATTGTGGTCTATGGTATACAGTCGGAGAAGGG
GATAGTTGCAGTCTGGTTACTGTCGCCAATGCCATCTCCCTTGTGGACCTCTACTTCCTTAACCCAGAGATTGAC
GCCAATTGTACCAACCTTGAGCTCGGGGAGGCTTACTGTATCGCCGCAGTTGGAGATATTAGTACCTACTCTGGC
TACCCAGTCACAACGCCCTTATTCACTGTGACAACAGCCAGCTTCCCCGCCGTCGATACATCAATTCCCACAGCG
ACCAGTGATCCGGGGTTCGTCTATATACCAATATATCTCCCTACGGCCCCGGACACGCTTACTAACTGCCAACGA
TACGCCAACTATGATAATACCATATATAACCTCAACTCTTCAACCGGCAGTGACAATACCAGCAGCAGTAACAGC
GGACTTGGCTCTCTCTGCTTGTCCCTTAATGCTACCGAGTCTACCACTGTCTCAAACTGCAACTGCTTCACCGGT
GTCAATGGCTACGATAAAGGAGAATACCAATGTGCTGATATTGAGGAAGACTTCGATATCACAGAAGCCCAACTC
CTTACGTGGAACCCTTGGCTCGGCACAGACTGTGACACAAATCTGTACGCTAATCTTAACGATACCGATACTCGT
GCCGTCTGTATTGGGGTGGGTTCGAGCACGTCAACTACTGCCACCACAACCCCTAGTAGTACTACCGCTACTGCT
ACGTCGGTAGCCCTAACACAAACTGGATACATCTATGGGTGCCAGGAGTTCTTTACCGTTGAGTCGGGAGATGAT
TGTTCGACAATGGAGACTGAGTTTGGAGTTACTCTTGCCCAACTCTATGAGTGGAATCCCAGTATTGGAAAAACA
TGTACGAACCTTTGGCTCGGATATACCTACTGCGTCAAGGGTCCCACCGCCACGGCGAGTAGCTCAGCTGGTACG
CCTACACAGACTGGCATCGCGTCCAATTGCAACGAATATTATACAGTCGTTTCCGGGGACTCGTGCGCGGCGGTC
GAGGGTGCGTTCGAAATAACATTTGCGCAGCTGTACGAATGGAATCCGGTGATTGGGTCAGATTGTCAGTATTTG
GATGTTGGCTATGCCATTTGTGTTGGCGTTTCATAG
Gene >Pro_DTO377G3_2|g3866.t1
ATGGCAGCATTGCGGATGGTGGCGCTGTTGGCTGCCCTGGCGGTTCTCCTGCCTCTGTCCTGGGCGCAGCAATTC
ACTGGTACCCAGATGTTCACCAACTATACAGGCCTGAGTACAGACTGCCAGCAGGCATTGGCAACAAATGTGACA
TGCTCTCCGTATCTGGGTATTGTCTCGGAAAAGTACGTTGATTTATGATCCTACGTGTATATACTCGCCATATAT
GAGAAACTATATGTGGACTTTTCATACCAAGTGCTAATTTTCCCTCAGCAATGGCGTCGTGACAGCCGATCAGAT
CGAAGATGTGTGCGTTGATGACTGCTATAGCTCTCTGGAGGCTGCCAGAAGCGTCATCGCGGCCGCTTGTACCCT
CGACACAGATATCATCGTTGTCGAGAACGTGGCATACCCGGCTACATTCATAGTGGATAACTATCTATTCACGTA
CGAGCTGTCCTGTCGAAAAGACAGCACCACGGGTGAATACTGCGATCCCCTCGTGGCCTTATGGTCCAATCAGTC
TCTCAATACTAGCCAGCTGTGCTCCGACTGCTGGCTAGGAGGGCTTGCGCTGGAACTGAACAGTCCCTTCGGATA
TGATAGCGTTGTGGCTGTGAACTACGTATCGCTGCTATCCAGCTGCAATGCGACCACGTATACCTATGCCACTCC
GACACAATACGCACTAAACGCCACAGCCACATCTGAACCGGCGACTGTAATAACAACTCCGGCATCGAGCTGCAC
AGGTTCTTATGAAGTACAAGTAGAGGATACCTGTAACTCGGTAGCTCAGGCTCTCAACGTGTCTACGTACAGTCT
ACTCTACCTGAATAACTTGGATCTCTATTGCCTGAATTGGGCTTCAACAGCGGTCAACTCGAGTCTGTGTATCCC
ACCACAATGTGATACCCACGTGTGGCAGGCGACCGATACCTGTGACAGTGTGGTCGGTGGCTTGTCCAATGTCAC
TATTCCGCAATTCCTGGCCTGGAACCCCAACTTCAATGCTTTGTGCCAGAACGCCGTCAATTATATTGACTATAT
GGTTTGCGTCGGGTGAGTTCAATCCCTAGTTCTCTTCTTGCCCTCTATCTACTAGGCCACGGTATACTAATTACG
ATCCCAACGTTTAGTCCTCCTGGAGGCTATCTTAATCATACCACCGATATATCAGGCAATTCTACAGTACAGAAT
CCAACAAGTATTACCTCCGCTGTCCCTGCGCCTACCAACGCCCTAAATGGATCTACTACAGATTGTGGTCTATGG
TATACAGTAAGTTTTGCCCCTCGGGATTCCGACAAATATTAGACCTACGGCAATATTTTTAACATAATATATAGG
TCGGAGAAGGGGATAGTTGCAGTCTGGTTACTGTCGCCAATGCCATCTCCCTTGTGGACCTCTACTTCCTTAACC
CAGAGATTGACGCCAATTGTACCAACCTTGAGCTCGGGGAGGCTTACTGTATCGCCGCAGTTGGAGATATTAGTA
CCTACTCTGGCTACCCAGTCACAACGCCCTTATTCACTGTGACAACAGCCAGCTTCCCCGCCGTCGATACATCAA
TTCCCACAGCGACCAGTGATCCGGGGTTCGTCTATATACCAATATATCTCCCTACGGCCCCGGACACGCTTACTA
ACTGCCAACGATACGCCAACTATGATAATACCATATATAACCTCAACTCTTGTAAGTGGGTTGCGTGGCTGAATG
AAGTTATAACAGCCGATTTCCTCGACTGGAACCCTAGTCTCAACACTAATCTGAGCTTATGTACCATGCAGCCAG
GGTACAGTTATTGTGCTATTCTCAATAGTTCTTATAGTAAGTGATCTTATTGCGCCTTTTACCATTTCTCTCCGG
ACCTTTCTCTAATGCCATATCTTTTCTTTTGCGAAAATAGCAACCGGCAGTGACAATACCAGCAGCAGTAACAGC
GGACTTGGCTCTCTCTGCTTGTCCCTTAATGCTACCGAGTCTACCACTGTCTCAAACTGCAACTGCTTCACCGGT
GTCAATGGCTACGATAAAGGAGGTATGGATGACAACGAATAAAAGAAGTGAAGGAATAGGGCACTCGCATTTCAT
AATACTGATTTTGCCTAGAATACCAATGTGCTGATATTGAGGAAGACTTCGATATCACAGAAGCCCAACTCCTTA
CGTGGAACCCTTGGCTCGGCACAGACTGTGACACAAATCTGTACGCTAATCTTAACGATACCGATACTCGTGCCG
TCTGTATTGGGGTGGGTTCGAGCACGTCAACTACTGCCACCACAACCCCTAGTAGTACTACCGCTACTGCTACGT
CGGTAGCCCTAACACAAACTGGATACATCTATGGGTGCCAGGAGTTCTTTACCGTTGAGTCGGGAGATGATTGTT
CGACAATGGAGACTGAGTTTGGAGTTACTCTTGCCCAACTCTATGAGTGGAATCCCAGTAGTAAGATCCTATCCA
TCAAAAACCCCCCTAGAGATGAGTCAAGCTAATTCCGAACTATAGTTGGAAAAACATGTACGAACCTTTGGCTCG
GATATACCTACTGCGTCAAGGGTCCCACCGCCACGGCGAGTAGCTCAGCTGGTACGCCTACACAGACTGGCATCG
CGTCCAATTGCAACGAATATTATACAGTCGTTTCCGGGGACTCGTGCGCGGCGGTCGAGGGTGCGTTCGAAATAA
CATTTGCGCAGCTGTACGAATGGAATCCGGTGATTGGGTCAGATTGTCAGTATTTGGATGTTGGCTATGCCATTT
GTGTTGGCGTTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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