© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3852.t1 |
| Gene name | |
| Location | scaffold_07:78623..79894 |
| Strand | + |
| Gene length (bp) | 1271 |
| Transcript length (bp) | 1053 |
| Coding sequence length (bp) | 1053 |
| Protein length (aa) | 351 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02102 | Peptidase_M35 | Deuterolysin metalloprotease (M35) family | 2.6E-176 | 1 | 346 |
| PF14521 | Aspzincin_M35 | Lysine-specific metallo-endopeptidase | 1.4E-39 | 207 | 344 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0008233 | peptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0004175 | endopeptidase activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008237 | metallopeptidase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3852.t1 MRFTALSTVLLALAQHVHALPVKTNETSALDITLSRVTDTRIKAVVKNSGSEDVTFVHLNFFRDTAPVKKVNVFK NDAEITFEGIKRRFALEGLAEESLTSLAAGETFEDEFDIAATSDLSSGGPLTLRSTGLVPLVTDGTVTGYLPYRS NDLKIEVDGVKASRVLKAIKPLDRRALQTCSNASKKSALANALKNTVTLASNAAEAALSGSSTKFNEYFKTTSTA TRNVVAARLRAVAKEAGSVTATKYYCEDTLGYCETNVLAYTLPSQNVIANCDIYYSKLPALTSTCHSQDQATTTL HELTHAPGVYSPGTEDNGYGYSAATALTSAKAVLNADSYALYANAIALGC* |
| Coding | >Pro_DTO377G3_2|g3852.t1 ATGCGTTTTACTGCCCTTTCCACGGTACTTCTGGCTCTAGCACAGCATGTGCATGCCTTGCCAGTCAAAACCAAC GAGACTTCTGCTCTCGATATCACCTTGAGTCGTGTCACTGACACCCGTATCAAGGCTGTCGTGAAGAACTCTGGC AGCGAAGATGTCACATTTGTGCATCTCAACTTCTTCCGTGACACCGCACCGGTAAAGAAGGTTAATGTCTTCAAG AACGATGCTGAAATCACTTTTGAGGGAATCAAGCGCCGGTTCGCCCTCGAGGGTCTCGCTGAGGAATCCCTCACC TCCCTCGCTGCAGGAGAGACCTTCGAAGATGAATTTGACATTGCCGCTACCAGTGACTTGTCTAGTGGAGGCCCA TTGACTCTTCGTTCCACTGGCCTCGTGCCCCTGGTCACTGATGGTACAGTCACTGGATATCTGCCATACCGTTCC AATGATCTGAAGATCGAGGTTGACGGTGTCAAGGCATCCCGAGTGCTGAAGGCTATCAAGCCGCTAGATCGCCGT GCTCTTCAAACTTGCAGTAATGCAAGCAAGAAGTCTGCACTTGCCAATGCTCTTAAGAACACCGTGACGCTCGCA AGCAATGCTGCAGAGGCTGCCCTTTCTGGATCTTCCACTAAGTTCAATGAGTACTTCAAGACTACCAGCACCGCT ACACGCAATGTCGTGGCTGCTCGCCTTCGGGCTGTGGCAAAAGAGGCCGGCTCGGTGACTGCCACTAAGTACTAC TGCGAAGATACCTTGGGATACTGCGAAACCAATGTCTTGGCTTACACTCTGCCATCTCAAAATGTGATCGCCAAT TGTGATATCTACTACAGCAAGCTCCCAGCATTGACTAGCACATGCCACAGCCAAGACCAAGCAACCACAACTCTC CACGAGCTCACCCATGCTCCTGGCGTGTACAGCCCGGGAACCGAAGATAACGGATACGGATACAGCGCCGCGACA GCCCTCACTAGCGCAAAAGCTGTGTTGAACGCTGACTCGTATGCACTGTATGCCAATGCAATCGCCCTTGGCTGC TGA |
| Transcript | >Pro_DTO377G3_2|g3852.t1 ATGCGTTTTACTGCCCTTTCCACGGTACTTCTGGCTCTAGCACAGCATGTGCATGCCTTGCCAGTCAAAACCAAC GAGACTTCTGCTCTCGATATCACCTTGAGTCGTGTCACTGACACCCGTATCAAGGCTGTCGTGAAGAACTCTGGC AGCGAAGATGTCACATTTGTGCATCTCAACTTCTTCCGTGACACCGCACCGGTAAAGAAGGTTAATGTCTTCAAG AACGATGCTGAAATCACTTTTGAGGGAATCAAGCGCCGGTTCGCCCTCGAGGGTCTCGCTGAGGAATCCCTCACC TCCCTCGCTGCAGGAGAGACCTTCGAAGATGAATTTGACATTGCCGCTACCAGTGACTTGTCTAGTGGAGGCCCA TTGACTCTTCGTTCCACTGGCCTCGTGCCCCTGGTCACTGATGGTACAGTCACTGGATATCTGCCATACCGTTCC AATGATCTGAAGATCGAGGTTGACGGTGTCAAGGCATCCCGAGTGCTGAAGGCTATCAAGCCGCTAGATCGCCGT GCTCTTCAAACTTGCAGTAATGCAAGCAAGAAGTCTGCACTTGCCAATGCTCTTAAGAACACCGTGACGCTCGCA AGCAATGCTGCAGAGGCTGCCCTTTCTGGATCTTCCACTAAGTTCAATGAGTACTTCAAGACTACCAGCACCGCT ACACGCAATGTCGTGGCTGCTCGCCTTCGGGCTGTGGCAAAAGAGGCCGGCTCGGTGACTGCCACTAAGTACTAC TGCGAAGATACCTTGGGATACTGCGAAACCAATGTCTTGGCTTACACTCTGCCATCTCAAAATGTGATCGCCAAT TGTGATATCTACTACAGCAAGCTCCCAGCATTGACTAGCACATGCCACAGCCAAGACCAAGCAACCACAACTCTC CACGAGCTCACCCATGCTCCTGGCGTGTACAGCCCGGGAACCGAAGATAACGGATACGGATACAGCGCCGCGACA GCCCTCACTAGCGCAAAAGCTGTGTTGAACGCTGACTCGTATGCACTGTATGCCAATGCAATCGCCCTTGGCTGC TGA |
| Gene | >Pro_DTO377G3_2|g3852.t1 ATGCGTTTTACTGCCCTTTCCACGGTACTTCTGGCTCTAGCACAGCATGTGCATGCCTTGCCAGTCAAAACCAAC GAGACTTCTGCTCTCGATATCACCTTGAGTCGTGTCACTGACACCCGTATCAAGGCTGTCGTGAAGAACTCTGGC AGCGAAGATGTCACATTTGTGCATCTCAACTTCTTCCGTGACACCGCACCGGTAAAGAAGGTTAATGTCTTCAAG AACGGTATATGAAATTTCTCCAGACCTTATCAGTTTAAAGCTAATTTAATATCAGATGCTGAAATCACTTTTGAG GGAATCAAGCGCCGGTTCGCCCTCGAGGGTCTCGCTGAGGAATCCCTCACCTCCCTCGCTGCAGGAGAGACCTTC GAAGATGAATTTGACATTGCCGCTACCAGTGACTTGTCTAGTGGAGGCCCATTGACTCTTCGTTCCACTGGCCTC GTGCCCCTGGTCACTGATGGTACAGTCACTGGATATCTGCCATACCGTTCCAATGATCTGAAGATCGAGGTTGAC GGTGTCAAGGCATCCCGAGTGCTGAAGGCTATCAAGCCGCTAGATCGCCGTGCTCTTCAAACTTGCAGTAATGCA AGCAAGAAGTCTGCACTTGCCAATGCTCTTAAGAACACCGTGACGCTCGCAAGCAATGCTGCAGAGGCTGCCCTT TCTGGATCTTCCACTAAGTATGTGCATACCGTTCTACTACCAATTAATCATTCTAATAGCCTCCCATAGGTTCAA TGAGTACTTCAAGACTACCAGCACCGCTACACGCAATGTCGTGGCTGCTCGCCTTCGGGCTGTGGCAAAAGAGGC CGGCTCGGTGACTGCCACTAAGTACTACTGCGAAGATACCTTGGGATAGTCAGTACCCCCTTTCGATAAAAACTT GACGTGCATATGACTAACAAATGTAATACAAATAGCTGCGAAACCAATGTCTTGGCTTACACTCTGCCATCTCAA AATGTGATCGCCAATTGTGATATCTACTACAGCAAGCTCCCAGCATTGACTAGCACATGCCACAGCCAAGACCAA GCAACCACAACTCTCCACGAGCTCACCCATGCTCCTGGCGTGTACAGCCCGGGAACCGAAGATAACGGATACGGA TACAGCGCCGCGACAGCCCTCACTAGCGCAAAAGCTGTGTTGAACGCTGACTCGTATGCACTGTATGCCAATGGT TAGTGTTCGATGTTGAGTCCGTTTGAAGAAAATCAGCTAATCAGCAAACAGCAATCGCCCTTGGCTGCTGA |