Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3824.t1
Gene name
Locationscaffold_07:9114..11723
Strand-
Gene length (bp)2609
Transcript length (bp)2319
Coding sequence length (bp)2319
Protein length (aa) 773

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 2.0E-03 218 264
PF01476 LysM LysM domain 3.7E-02 363 393
PF01476 LysM LysM domain 1.1E-01 653 691
PF01476 LysM LysM domain 7.0E-05 724 756

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3824.t1
MRGMWTAPWALLISTALAQQPAGIRGFTSYPGLTDGCKEALSTNVSCPAFLPVVSPDNSLLDGDQVDELCVDTCY
SSLKSARATIKAACSETTDVIVVEDVAYPATFIADKYMLTYDISCRKDESGGYCDPQLLSWSNGSWPVNGSCSDC
WLGTLETQLNSPLGYDEGVADSFTSLTSSCSATGYSVTSPTAYALNATATATSSPATSSATTSCENYYQVKETDD
CNSVAKSLGVSTYYLLQTNDLDLYCQNFAAKVNQTLCVPSQCTTHTWQADDTCDSVVGGLANVTLPQFFSWNPNI
NSLCLNAIFFIGYEVCVSPPSGYLNQTAGGSDSSATETGVATGIAAVPTNAMDNSNRNCSQWYTVQKGDECAKVS
LAHSISLTDFYFLNPEIDANCTNLLLDEAYCVKAVGSITSYANYTVTGVLPITVTPVNFTNVNTDIPTATSDPGY
VYTGAALLPTASGTIPDCYDYENPSNYTSECVAMATFWGITMKQMVTWNPSLVNNASTCELNKENSYCILRYENS
TASTEDTDSGLCLPMNATEAGTAFNCNCFTSVDLSYSDVYTCDDIIYDYSLTMDDLVSWNSWLEGDCDTALYASL
NATDDRAICIGVGSAAATTTASGTATQTPTTTSSSSSMGPTPTDTVSGCEKFYTTTKGDDCATVETKFSITLAQF
YQWNPSVGSTCTNLWLGEAYCVKGPASTTSATASAPTQTGIASNCNQYYTVVSNDSCAKIETAYGITFAELYKWN
PAIGSDCEYLGVGYSVCVGVSS*
Coding >Pro_DTO377G3_2|g3824.t1
ATGCGTGGGATGTGGACTGCCCCGTGGGCTCTACTAATTTCCACGGCCCTTGCCCAGCAGCCTGCTGGCATTCGA
GGATTCACAAGCTATCCTGGTCTCACCGATGGTTGCAAAGAAGCCTTGTCGACTAATGTGTCCTGTCCGGCATTT
CTGCCCGTTGTGTCCCCAGACAACTCTCTTCTGGATGGTGATCAAGTCGATGAACTTTGCGTCGACACCTGCTAT
AGTTCTTTGAAAAGCGCCAGAGCAACCATCAAGGCGGCCTGCTCAGAGACCACCGATGTGATCGTCGTTGAGGAT
GTAGCTTATCCAGCTACATTTATCGCTGACAAGTACATGTTGACCTATGACATATCTTGTCGGAAAGATGAGTCC
GGGGGTTACTGTGACCCGCAATTGCTCTCCTGGTCCAACGGGTCTTGGCCTGTTAATGGTTCTTGCTCGGATTGT
TGGCTGGGGACATTAGAGACTCAATTAAACAGCCCCTTAGGGTATGATGAGGGCGTGGCGGACAGCTTCACTTCT
TTGACGTCGAGCTGCAGCGCCACGGGTTACTCAGTCACTTCCCCAACTGCGTACGCGCTTAATGCAACTGCGACT
GCAACCAGCTCGCCTGCAACCAGCTCGGCAACAACCAGCTGCGAAAACTATTATCAGGTGAAGGAAACAGACGAC
TGTAACTCCGTGGCAAAGTCGCTGGGAGTCTCTACATACTACCTACTGCAAACCAACGACTTGGATCTCTACTGT
CAAAACTTTGCGGCGAAAGTCAACCAGACACTCTGTGTCCCCTCGCAGTGCACCACACACACCTGGCAGGCTGAT
GACACTTGCGATAGTGTCGTCGGCGGCCTCGCGAATGTGACTCTTCCGCAGTTCTTCTCCTGGAACCCCAATATC
AATTCCCTCTGTCTGAATGCGATTTTCTTCATTGGATATGAGGTGTGTGTGAGTCCCCCGAGTGGCTACTTGAAT
CAGACTGCTGGTGGATCCGACTCAAGCGCAACCGAAACTGGAGTAGCCACTGGCATTGCAGCGGTCCCAACAAAT
GCTATGGACAATAGCAACCGCAACTGCAGCCAGTGGTATACGGTTCAAAAAGGCGATGAATGTGCCAAGGTCTCT
CTCGCCCATTCTATCTCCCTTACCGACTTCTACTTCCTGAACCCAGAAATCGACGCAAACTGCACAAACCTCCTG
CTTGACGAGGCATACTGTGTTAAGGCCGTTGGTTCAATCACCAGCTACGCAAACTACACGGTGACTGGAGTATTG
CCCATCACCGTCACGCCCGTCAACTTCACCAACGTGAATACTGACATACCTACGGCCACAAGCGATCCTGGCTAT
GTGTATACGGGAGCGGCGCTCCTTCCCACCGCTTCGGGCACTATCCCAGACTGCTATGACTACGAAAATCCTTCC
AACTATACTTCTGAGTGTGTGGCGATGGCGACATTTTGGGGCATTACAATGAAACAAATGGTCACTTGGAATCCA
AGTCTTGTGAACAACGCAAGCACCTGTGAGCTCAACAAGGAAAACAGCTACTGCATCCTGCGGTATGAAAACAGC
ACTGCCTCAACGGAGGATACTGATAGTGGGCTCTGCCTTCCCATGAATGCTACGGAGGCTGGAACGGCATTCAAC
TGCAATTGCTTCACCTCCGTCGACCTGTCTTACTCTGACGTATACACCTGCGACGACATCATTTACGATTACAGC
CTGACCATGGACGACCTTGTGTCCTGGAACAGCTGGCTGGAAGGAGACTGTGACACTGCGCTCTATGCCAGCCTA
AATGCCACGGATGACCGCGCCATCTGTATTGGTGTCGGGTCTGCAGCTGCAACGACTACAGCCAGTGGAACTGCC
ACCCAAACCCCCACCACCACCTCCTCCTCCTCTTCCATGGGGCCCACTCCAACCGACACTGTGTCGGGATGCGAG
AAGTTCTACACCACTACAAAGGGCGACGACTGTGCCACAGTCGAGACCAAGTTCAGCATCACCCTTGCTCAATTC
TATCAGTGGAACCCCAGTGTTGGCTCTACTTGTACCAATTTGTGGCTAGGAGAAGCATACTGTGTCAAGGGACCG
GCATCGACGACCAGCGCAACAGCAAGTGCACCCACTCAGACGGGAATCGCGTCGAACTGCAACCAGTATTACACG
GTGGTGTCGAACGATTCGTGCGCCAAGATCGAGACCGCGTATGGTATTACTTTTGCTGAACTATACAAGTGGAAT
CCTGCGATTGGATCGGACTGTGAGTATCTAGGAGTCGGGTACTCGGTGTGTGTGGGGGTTTCTTCATAG
Transcript >Pro_DTO377G3_2|g3824.t1
ATGCGTGGGATGTGGACTGCCCCGTGGGCTCTACTAATTTCCACGGCCCTTGCCCAGCAGCCTGCTGGCATTCGA
GGATTCACAAGCTATCCTGGTCTCACCGATGGTTGCAAAGAAGCCTTGTCGACTAATGTGTCCTGTCCGGCATTT
CTGCCCGTTGTGTCCCCAGACAACTCTCTTCTGGATGGTGATCAAGTCGATGAACTTTGCGTCGACACCTGCTAT
AGTTCTTTGAAAAGCGCCAGAGCAACCATCAAGGCGGCCTGCTCAGAGACCACCGATGTGATCGTCGTTGAGGAT
GTAGCTTATCCAGCTACATTTATCGCTGACAAGTACATGTTGACCTATGACATATCTTGTCGGAAAGATGAGTCC
GGGGGTTACTGTGACCCGCAATTGCTCTCCTGGTCCAACGGGTCTTGGCCTGTTAATGGTTCTTGCTCGGATTGT
TGGCTGGGGACATTAGAGACTCAATTAAACAGCCCCTTAGGGTATGATGAGGGCGTGGCGGACAGCTTCACTTCT
TTGACGTCGAGCTGCAGCGCCACGGGTTACTCAGTCACTTCCCCAACTGCGTACGCGCTTAATGCAACTGCGACT
GCAACCAGCTCGCCTGCAACCAGCTCGGCAACAACCAGCTGCGAAAACTATTATCAGGTGAAGGAAACAGACGAC
TGTAACTCCGTGGCAAAGTCGCTGGGAGTCTCTACATACTACCTACTGCAAACCAACGACTTGGATCTCTACTGT
CAAAACTTTGCGGCGAAAGTCAACCAGACACTCTGTGTCCCCTCGCAGTGCACCACACACACCTGGCAGGCTGAT
GACACTTGCGATAGTGTCGTCGGCGGCCTCGCGAATGTGACTCTTCCGCAGTTCTTCTCCTGGAACCCCAATATC
AATTCCCTCTGTCTGAATGCGATTTTCTTCATTGGATATGAGGTGTGTGTGAGTCCCCCGAGTGGCTACTTGAAT
CAGACTGCTGGTGGATCCGACTCAAGCGCAACCGAAACTGGAGTAGCCACTGGCATTGCAGCGGTCCCAACAAAT
GCTATGGACAATAGCAACCGCAACTGCAGCCAGTGGTATACGGTTCAAAAAGGCGATGAATGTGCCAAGGTCTCT
CTCGCCCATTCTATCTCCCTTACCGACTTCTACTTCCTGAACCCAGAAATCGACGCAAACTGCACAAACCTCCTG
CTTGACGAGGCATACTGTGTTAAGGCCGTTGGTTCAATCACCAGCTACGCAAACTACACGGTGACTGGAGTATTG
CCCATCACCGTCACGCCCGTCAACTTCACCAACGTGAATACTGACATACCTACGGCCACAAGCGATCCTGGCTAT
GTGTATACGGGAGCGGCGCTCCTTCCCACCGCTTCGGGCACTATCCCAGACTGCTATGACTACGAAAATCCTTCC
AACTATACTTCTGAGTGTGTGGCGATGGCGACATTTTGGGGCATTACAATGAAACAAATGGTCACTTGGAATCCA
AGTCTTGTGAACAACGCAAGCACCTGTGAGCTCAACAAGGAAAACAGCTACTGCATCCTGCGGTATGAAAACAGC
ACTGCCTCAACGGAGGATACTGATAGTGGGCTCTGCCTTCCCATGAATGCTACGGAGGCTGGAACGGCATTCAAC
TGCAATTGCTTCACCTCCGTCGACCTGTCTTACTCTGACGTATACACCTGCGACGACATCATTTACGATTACAGC
CTGACCATGGACGACCTTGTGTCCTGGAACAGCTGGCTGGAAGGAGACTGTGACACTGCGCTCTATGCCAGCCTA
AATGCCACGGATGACCGCGCCATCTGTATTGGTGTCGGGTCTGCAGCTGCAACGACTACAGCCAGTGGAACTGCC
ACCCAAACCCCCACCACCACCTCCTCCTCCTCTTCCATGGGGCCCACTCCAACCGACACTGTGTCGGGATGCGAG
AAGTTCTACACCACTACAAAGGGCGACGACTGTGCCACAGTCGAGACCAAGTTCAGCATCACCCTTGCTCAATTC
TATCAGTGGAACCCCAGTGTTGGCTCTACTTGTACCAATTTGTGGCTAGGAGAAGCATACTGTGTCAAGGGACCG
GCATCGACGACCAGCGCAACAGCAAGTGCACCCACTCAGACGGGAATCGCGTCGAACTGCAACCAGTATTACACG
GTGGTGTCGAACGATTCGTGCGCCAAGATCGAGACCGCGTATGGTATTACTTTTGCTGAACTATACAAGTGGAAT
CCTGCGATTGGATCGGACTGTGAGTATCTAGGAGTCGGGTACTCGGTGTGTGTGGGGGTTTCTTCATAG
Gene >Pro_DTO377G3_2|g3824.t1
ATGCGTGGGATGTGGACTGCCCCGTGGGCTCTACTAATTTCCACGGCCCTTGCCCAGCAGCCTGCTGGCATTCGA
GGATTCACAAGCTATCCTGGTCTCACCGATGGTTGCAAAGAAGCCTTGTCGACTAATGTGTCCTGTCCGGCATTT
CTGCCCGTTGTGTCCCCAGAGTAGGTCTGATTCATAAATTGCGGGCTCAAAGCTGATTTAAACAGCAACTCTCTT
CTGGATGGTGATCAAGTCGATGAACTTTGCGTCGACACCTGCTATAGTTCTTTGAAAAGCGCCAGAGCAACCATC
AAGGCGGCCTGCTCAGAGACCACCGATGTGATCGTCGTTGAGGATGTAGCTTATCCAGCTACATTTATCGCTGAC
AAGTACATGTTGACCTATGACATATCTTGTCGGAAAGATGAGTGAGTGGTGATTCTGCCAATGATTATCGATTCT
GACCATCATTAGGTCCGGGGGTTACTGTGACCCGCAATTGCTCTCCTGGTCCAACGGGTCTTGGCCTGTTAATGG
TTCTTGCTCGGATTGTTGGCTGGGGACATTAGAGACTCAATTAAACAGCCCCTTAGGGTATGATGAGGGCGTGGC
GGACAGCTTCACTTCTTTGACGTCGAGCTGCAGCGCCACGGGTTACTCAGTCACTTCCCCAACTGCGTACGCGCT
TAATGCAACTGCGACTGCAACCAGCTCGCCTGCAACCAGCTCGGCAACAACCAGCTGCGAAAACTATTATCAGGT
GAAGGAAACAGACGACTGTAACTCCGTGGCAAAGTCGCTGGGAGTCTCTACATACTACCTACTGCAAACCAACGA
CTTGGATCTCTACTGTCAAAACTTTGCGGCGAAAGTCAACCAGACACTCTGTGTCCCCTCGCAGTGCACCACACA
CACCTGGCAGGCTGATGACACTTGCGATAGTGTCGTCGGCGGCCTCGCGAATGTGACTCTTCCGCAGTTCTTCTC
CTGGAACCCCAATATCAATTCCCTCTGTCTGAATGCGATTTTCTTCATTGGATATGAGGTGTGTGTGAGGTGAGT
AGATTTCGCTTCAATCTCAATTTGAGAGTCACGGAATATTGACCTTTACAGTCCCCCGAGTGGCTACTTGAATCA
GACTGCTGGTGGATCCGACTCAAGCGCAACCGAAACTGGAGTAGCCACTGGCATTGCAGCGGTCCCAACAAATGC
TATGGACAATAGCAACCGCAACTGCAGCCAGTGGTATACGGTGAGTGATCCTTCCATCCAAGTTGGGTCTTTGCT
CATTTCTACTAGGTTCAAAAAGGCGATGAATGTGCCAAGGTCTCTCTCGCCCATTCTATCTCCCTTACCGACTTC
TACTTCCTGAACCCAGAAATCGACGCAAACTGCACAAACCTCCTGCTTGACGAGGCATACTGTGTTAAGGCCGTT
GGTTCAATCACCAGCTACGCAAACTACACGGTGACTGGAGTATTGCCCATCACCGTCACGCCCGTCAACTTCACC
AACGTGAATACTGACATACCTACGGCCACAAGCGATCCTGGCTATGTGTATACGGGAGCGGCGCTCCTTCCCACC
GCTTCGGGCACTATCCCAGACTGCTATGACTACGAAAATCCTTCCAACTATACTTCTGAGTGTGTGGCGATGGCG
ACATTTTGGGGCATTACAATGAAACAAATGGTCACTTGGAATCCAAGTCTTGTGAACAACGCAAGCACCTGTGAG
CTCAACAAGGAAAACAGCTACTGCATCCTGCGGTATGAAAACAGCACTGCCTGTAAGTACCGCTGGCTCGAACAA
ATAGATTAGGCTGACGCAGATGTAGCAACGGAGGATACTGATAGTGGGCTCTGCCTTCCCATGAATGCTACGGAG
GCTGGAACGGCATTCAACTGCAATTGCTTCACCTCCGTCGACCTGTCTTACTCTGACGGTATGATTTGACCCTCC
CCAATCGTGCTATTACTAATCAAATGCTAGTATACACCTGCGACGACATCATTTACGATTACAGCCTGACCATGG
ACGACCTTGTGTCCTGGAACAGCTGGCTGGAAGGAGACTGTGACACTGCGCTCTATGCCAGCCTAAATGCCACGG
ATGACCGCGCCATCTGTATTGGTGTCGGGTCTGCAGCTGCAACGACTACAGCCAGTGGAACTGCCACCCAAACCC
CCACCACCACCTCCTCCTCCTCTTCCATGGGGCCCACTCCAACCGACACTGTGTCGGGATGCGAGAAGTTCTACA
CCACTACAAAGGGCGACGACTGTGCCACAGTCGAGACCAAGTTCAGCATCACCCTTGCTCAATTCTATCAGTGGA
ACCCCAGTGTTGGCTCTACTTGTACCAATTTGTGGCTAGGAGAAGCATACTGTGTCAAGGGACCGGCATCGACGA
CCAGCGCAACAGCAAGTGCACCCACTCAGACGGGAATCGCGTCGAACTGCAACCAGTATTACACGGTGGTGTCGA
ACGATTCGTGCGCCAAGATCGAGACCGCGTATGGTATTACTTTTGCTGAACTATACAAGTGGAATCCTGCGATTG
GATCGGACTGTGAGTATCTAGGAGTCGGGTACTCGGTGTGTGTGGGGGTTTCTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail