Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3816.t1
Gene name
Locationscaffold_06:841004..842945
Strand+
Gene length (bp)1941
Transcript length (bp)1941
Coding sequence length (bp)1941
Protein length (aa) 647

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00072 Response_reg Response regulator receiver domain 3.3E-24 523 636
PF02518 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 3.6E-22 271 418
PF00512 HisKA His Kinase A (phospho-acceptor) domain 6.9E-09 147 218

GO

GO Term Description Terminal node
GO:0007165 signal transduction Yes
GO:0000160 phosphorelay signal transduction system Yes
GO:0000155 phosphorelay sensor kinase activity Yes
GO:0003824 catalytic activity No
GO:0140299 small molecule sensor activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0004672 protein kinase activity No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0008150 biological_process No
GO:0016740 transferase activity No
GO:0004673 protein histidine kinase activity No
GO:0050789 regulation of biological process No
GO:0016301 kinase activity No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0035556 intracellular signal transduction No
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor No
GO:0050794 regulation of cellular process No
GO:0009987 cellular process No
GO:0016773 phosphotransferase activity, alcohol group as acceptor No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 325.64 184.02 467.25
5d_25C Five days - 25 degrees Celsius 1254.30 569.32 1939.29
7d_25C Seven days - 25 degrees Celsius 1438.54 660.62 2216.46
10d_25C Ten days - 25 degrees Celsius 3057.61 1177.41 4937.82
7d_15C Seven days - 15 degrees Celsius 564.18 283.44 844.92
7d_30C Seven days - 30 degrees Celsius 1495.33 669.81 2320.85

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.000700 yes
3d_25C 7d_25C 0.000700 yes
3d_25C 7d_15C 0.025858 yes
3d_25C 7d_30C 0.000700 yes
3d_25C 10d_25C 0.000700 yes
5d_25C 7d_25C 0.733820 no
5d_25C 7d_15C 0.002761 yes
5d_25C 7d_30C 0.647314 no
5d_25C 10d_25C 0.004045 yes
7d_25C 7d_15C 0.000700 yes
7d_25C 7d_30C 0.933829 no
7d_25C 10d_25C 0.012609 yes
7d_15C 7d_30C 0.000700 yes
7d_15C 10d_25C 0.000700 yes
7d_30C 10d_25C 0.018034 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3816.t1
MTFSFNQNVSAQQLADILPNGVAILTHRYELISVNRRFRELIPHPSVNFSECWLRSVHPDDYDRVSTGYREVATS
KRPLRLEYHTRDPDSVWCVMTLDRLDDKGVQCFGLGDDGVFICTVADITPEKRAELLQKHAAEEAQERKKQQERF
IDMISHEIRNPLSAIVHCTEDIQEAIYNKNPGDISVIDITEATETISLCIRHQKKIVNDVLTFSKLDASMLPLSP
RKVQPQRHLTIPMAIFRPELRKHRIHFEYKTDVTYAKCGIDWVMADLDRMGQVLINILSNAIKFTAQSKGQRSIR
VSVAASIERPTSYPPNIVFFDSGESELRQDATNNSEWGSGEVAYIMVAVKDSGIGVTEQAQKRLFERFNQATPKT
ESIYGGSGLGLNVCRKLCHLHGGEIGVSSKKSHGSTFGFFFKVRRTTNEAGEEDDSVEISAIDKLCVDIQTMGNK
MRGVDETTEEPQMSANPPEDSISEAQPGGPKDADTLWTQSIAHEVENEQIERTGQKPPSRYDHKKLTGDGQRILL
AEDNIINRRIISRRLNTLGFNIVEASNGEEAVDANKKDSFDCILMDQQMPVMDGKRATKAIRDIEKESGGHVPIL
GVTANVRDEQQKEMLSAGMDDIIHKPYGTQELVKKILHLVSKEGNP*
Coding >Pro_DTO377G3_2|g3816.t1
ATGACTTTCTCTTTCAATCAGAATGTCTCAGCGCAACAGCTGGCCGACATTCTACCGAACGGCGTCGCCATCCTC
ACCCACCGATACGAACTGATCTCCGTGAATCGACGGTTCCGTGAACTCATTCCACACCCCAGCGTCAACTTCTCT
GAGTGTTGGTTACGCTCCGTCCATCCTGACGACTACGACCGGGTGTCCACAGGGTATCGGGAGGTTGCAACCTCC
AAACGACCGCTGCGTCTGGAATACCACACGCGCGACCCGGACTCGGTTTGGTGTGTCATGACTTTGGATCGGCTG
GACGATAAGGGTGTACAATGCTTTGGGCTAGGCGACGATGGCGTGTTCATCTGTACAGTCGCAGACATCACCCCG
GAGAAAAGGGCAGAGCTCCTACAAAAGCACGCTGCCGAAGAGGCACAGGAACGCAAGAAGCAACAAGAGCGATTC
ATCGATATGATCAGCCACGAAATTCGCAATCCTCTTTCTGCGATAGTACATTGCACGGAGGATATTCAAGAGGCA
ATCTATAACAAGAACCCGGGTGATATCTCAGTCATAGACATCACTGAGGCAACAGAGACAATTAGTCTCTGCATC
AGGCATCAAAAGAAAATCGTCAATGACGTTCTCACATTTTCAAAACTTGACGCGTCGATGCTGCCGCTGTCGCCA
CGAAAGGTCCAGCCACAGCGACACCTCACTATTCCGATGGCGATATTCCGACCCGAACTCCGAAAACACAGAATA
CACTTCGAATACAAGACCGATGTTACCTATGCCAAATGCGGCATTGATTGGGTCATGGCAGACCTAGATCGAATG
GGCCAAGTTCTCATCAACATACTCTCGAATGCTATCAAATTCACCGCGCAATCGAAGGGTCAGCGATCGATCCGA
GTTTCGGTGGCTGCTTCTATCGAACGTCCAACTTCCTACCCACCAAATATTGTCTTCTTCGATTCAGGTGAATCA
GAGCTCCGCCAAGACGCGACTAACAATTCCGAATGGGGAAGTGGCGAAGTTGCATATATCATGGTCGCCGTCAAG
GATTCGGGTATTGGCGTCACTGAGCAAGCTCAGAAACGCCTCTTCGAACGTTTCAACCAAGCTACCCCCAAAACC
GAGAGCATCTACGGTGGCTCTGGTCTTGGGCTGAATGTGTGTAGGAAGCTCTGTCACCTACACGGGGGTGAGATT
GGTGTGAGCTCCAAGAAATCCCACGGAAGTACCTTCGGGTTCTTTTTCAAAGTACGCAGAACAACCAACGAAGCT
GGCGAAGAAGATGATAGTGTCGAGATTTCCGCAATCGATAAGCTCTGTGTTGATATCCAGACAATGGGAAATAAA
ATGCGCGGTGTGGATGAAACGACAGAAGAACCCCAGATGTCGGCAAACCCCCCTGAAGATAGCATCTCTGAGGCA
CAGCCAGGTGGCCCAAAGGACGCAGACACACTTTGGACTCAAAGTATAGCCCACGAGGTAGAGAACGAGCAGATC
GAAAGAACGGGTCAAAAGCCTCCATCGCGTTATGATCACAAGAAACTAACCGGCGACGGCCAGCGTATTCTCTTA
GCTGAGGATAACATTATCAACAGACGAATTATCTCGCGCAGGTTGAATACACTGGGCTTTAACATAGTTGAAGCG
AGCAACGGGGAGGAGGCTGTGGATGCGAATAAAAAAGACTCATTTGACTGCATTCTCATGGACCAGCAGATGCCG
GTGATGGATGGCAAACGCGCCACCAAAGCAATCCGTGACATTGAAAAGGAAAGTGGAGGACATGTACCCATTCTG
GGAGTCACAGCGAATGTCAGAGACGAACAACAGAAGGAAATGCTCAGTGCTGGAATGGATGATATCATCCATAAA
CCTTATGGGACTCAGGAGCTTGTCAAAAAGATCCTCCACCTGGTCTCGAAGGAAGGGAATCCATAA
Transcript >Pro_DTO377G3_2|g3816.t1
ATGACTTTCTCTTTCAATCAGAATGTCTCAGCGCAACAGCTGGCCGACATTCTACCGAACGGCGTCGCCATCCTC
ACCCACCGATACGAACTGATCTCCGTGAATCGACGGTTCCGTGAACTCATTCCACACCCCAGCGTCAACTTCTCT
GAGTGTTGGTTACGCTCCGTCCATCCTGACGACTACGACCGGGTGTCCACAGGGTATCGGGAGGTTGCAACCTCC
AAACGACCGCTGCGTCTGGAATACCACACGCGCGACCCGGACTCGGTTTGGTGTGTCATGACTTTGGATCGGCTG
GACGATAAGGGTGTACAATGCTTTGGGCTAGGCGACGATGGCGTGTTCATCTGTACAGTCGCAGACATCACCCCG
GAGAAAAGGGCAGAGCTCCTACAAAAGCACGCTGCCGAAGAGGCACAGGAACGCAAGAAGCAACAAGAGCGATTC
ATCGATATGATCAGCCACGAAATTCGCAATCCTCTTTCTGCGATAGTACATTGCACGGAGGATATTCAAGAGGCA
ATCTATAACAAGAACCCGGGTGATATCTCAGTCATAGACATCACTGAGGCAACAGAGACAATTAGTCTCTGCATC
AGGCATCAAAAGAAAATCGTCAATGACGTTCTCACATTTTCAAAACTTGACGCGTCGATGCTGCCGCTGTCGCCA
CGAAAGGTCCAGCCACAGCGACACCTCACTATTCCGATGGCGATATTCCGACCCGAACTCCGAAAACACAGAATA
CACTTCGAATACAAGACCGATGTTACCTATGCCAAATGCGGCATTGATTGGGTCATGGCAGACCTAGATCGAATG
GGCCAAGTTCTCATCAACATACTCTCGAATGCTATCAAATTCACCGCGCAATCGAAGGGTCAGCGATCGATCCGA
GTTTCGGTGGCTGCTTCTATCGAACGTCCAACTTCCTACCCACCAAATATTGTCTTCTTCGATTCAGGTGAATCA
GAGCTCCGCCAAGACGCGACTAACAATTCCGAATGGGGAAGTGGCGAAGTTGCATATATCATGGTCGCCGTCAAG
GATTCGGGTATTGGCGTCACTGAGCAAGCTCAGAAACGCCTCTTCGAACGTTTCAACCAAGCTACCCCCAAAACC
GAGAGCATCTACGGTGGCTCTGGTCTTGGGCTGAATGTGTGTAGGAAGCTCTGTCACCTACACGGGGGTGAGATT
GGTGTGAGCTCCAAGAAATCCCACGGAAGTACCTTCGGGTTCTTTTTCAAAGTACGCAGAACAACCAACGAAGCT
GGCGAAGAAGATGATAGTGTCGAGATTTCCGCAATCGATAAGCTCTGTGTTGATATCCAGACAATGGGAAATAAA
ATGCGCGGTGTGGATGAAACGACAGAAGAACCCCAGATGTCGGCAAACCCCCCTGAAGATAGCATCTCTGAGGCA
CAGCCAGGTGGCCCAAAGGACGCAGACACACTTTGGACTCAAAGTATAGCCCACGAGGTAGAGAACGAGCAGATC
GAAAGAACGGGTCAAAAGCCTCCATCGCGTTATGATCACAAGAAACTAACCGGCGACGGCCAGCGTATTCTCTTA
GCTGAGGATAACATTATCAACAGACGAATTATCTCGCGCAGGTTGAATACACTGGGCTTTAACATAGTTGAAGCG
AGCAACGGGGAGGAGGCTGTGGATGCGAATAAAAAAGACTCATTTGACTGCATTCTCATGGACCAGCAGATGCCG
GTGATGGATGGCAAACGCGCCACCAAAGCAATCCGTGACATTGAAAAGGAAAGTGGAGGACATGTACCCATTCTG
GGAGTCACAGCGAATGTCAGAGACGAACAACAGAAGGAAATGCTCAGTGCTGGAATGGATGATATCATCCATAAA
CCTTATGGGACTCAGGAGCTTGTCAAAAAGATCCTCCACCTGGTCTCGAAGGAAGGGAATCCATAA
Gene >Pro_DTO377G3_2|g3816.t1
ATGACTTTCTCTTTCAATCAGAATGTCTCAGCGCAACAGCTGGCCGACATTCTACCGAACGGCGTCGCCATCCTC
ACCCACCGATACGAACTGATCTCCGTGAATCGACGGTTCCGTGAACTCATTCCACACCCCAGCGTCAACTTCTCT
GAGTGTTGGTTACGCTCCGTCCATCCTGACGACTACGACCGGGTGTCCACAGGGTATCGGGAGGTTGCAACCTCC
AAACGACCGCTGCGTCTGGAATACCACACGCGCGACCCGGACTCGGTTTGGTGTGTCATGACTTTGGATCGGCTG
GACGATAAGGGTGTACAATGCTTTGGGCTAGGCGACGATGGCGTGTTCATCTGTACAGTCGCAGACATCACCCCG
GAGAAAAGGGCAGAGCTCCTACAAAAGCACGCTGCCGAAGAGGCACAGGAACGCAAGAAGCAACAAGAGCGATTC
ATCGATATGATCAGCCACGAAATTCGCAATCCTCTTTCTGCGATAGTACATTGCACGGAGGATATTCAAGAGGCA
ATCTATAACAAGAACCCGGGTGATATCTCAGTCATAGACATCACTGAGGCAACAGAGACAATTAGTCTCTGCATC
AGGCATCAAAAGAAAATCGTCAATGACGTTCTCACATTTTCAAAACTTGACGCGTCGATGCTGCCGCTGTCGCCA
CGAAAGGTCCAGCCACAGCGACACCTCACTATTCCGATGGCGATATTCCGACCCGAACTCCGAAAACACAGAATA
CACTTCGAATACAAGACCGATGTTACCTATGCCAAATGCGGCATTGATTGGGTCATGGCAGACCTAGATCGAATG
GGCCAAGTTCTCATCAACATACTCTCGAATGCTATCAAATTCACCGCGCAATCGAAGGGTCAGCGATCGATCCGA
GTTTCGGTGGCTGCTTCTATCGAACGTCCAACTTCCTACCCACCAAATATTGTCTTCTTCGATTCAGGTGAATCA
GAGCTCCGCCAAGACGCGACTAACAATTCCGAATGGGGAAGTGGCGAAGTTGCATATATCATGGTCGCCGTCAAG
GATTCGGGTATTGGCGTCACTGAGCAAGCTCAGAAACGCCTCTTCGAACGTTTCAACCAAGCTACCCCCAAAACC
GAGAGCATCTACGGTGGCTCTGGTCTTGGGCTGAATGTGTGTAGGAAGCTCTGTCACCTACACGGGGGTGAGATT
GGTGTGAGCTCCAAGAAATCCCACGGAAGTACCTTCGGGTTCTTTTTCAAAGTACGCAGAACAACCAACGAAGCT
GGCGAAGAAGATGATAGTGTCGAGATTTCCGCAATCGATAAGCTCTGTGTTGATATCCAGACAATGGGAAATAAA
ATGCGCGGTGTGGATGAAACGACAGAAGAACCCCAGATGTCGGCAAACCCCCCTGAAGATAGCATCTCTGAGGCA
CAGCCAGGTGGCCCAAAGGACGCAGACACACTTTGGACTCAAAGTATAGCCCACGAGGTAGAGAACGAGCAGATC
GAAAGAACGGGTCAAAAGCCTCCATCGCGTTATGATCACAAGAAACTAACCGGCGACGGCCAGCGTATTCTCTTA
GCTGAGGATAACATTATCAACAGACGAATTATCTCGCGCAGGTTGAATACACTGGGCTTTAACATAGTTGAAGCG
AGCAACGGGGAGGAGGCTGTGGATGCGAATAAAAAAGACTCATTTGACTGCATTCTCATGGACCAGCAGATGCCG
GTGATGGATGGCAAACGCGCCACCAAAGCAATCCGTGACATTGAAAAGGAAAGTGGAGGACATGTACCCATTCTG
GGAGTCACAGCGAATGTCAGAGACGAACAACAGAAGGAAATGCTCAGTGCTGGAATGGATGATATCATCCATAAA
CCTTATGGGACTCAGGAGCTTGTCAAAAAGATCCTCCACCTGGTCTCGAAGGAAGGGAATCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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