© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3800.t1 |
| Gene name | |
| Location | scaffold_06:796662..797970 |
| Strand | + |
| Gene length (bp) | 1308 |
| Transcript length (bp) | 1101 |
| Coding sequence length (bp) | 1101 |
| Protein length (aa) | 367 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14735 | HAUS4 | HAUS augmin-like complex subunit 4 | 3.5E-07 | 253 | 365 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0070652 | HAUS complex | Yes |
| GO:0051225 | spindle assembly | Yes |
| GO:0007010 | cytoskeleton organization | No |
| GO:0022607 | cellular component assembly | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0005575 | cellular_component | No |
| GO:0016043 | cellular component organization | No |
| GO:0000226 | microtubule cytoskeleton organization | No |
| GO:0007017 | microtubule-based process | No |
| GO:0007051 | spindle organization | No |
| GO:0006996 | organelle organization | No |
| GO:0005875 | microtubule associated complex | No |
| GO:0009987 | cellular process | No |
| GO:0032991 | protein-containing complex | No |
| GO:0022402 | cell cycle process | No |
| GO:0008150 | biological_process | No |
| GO:0140694 | non-membrane-bounded organelle assembly | No |
| GO:0070925 | organelle assembly | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 53 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3800.t1 MLPPCDPSILEHNPQFKRLYENLTTSLLNSDASTRAQSASPARTAVVEELKQCQTQNAKKRIKEQMLRQLAFAPD TNLPAECHDNLAIITLYLETPSSAIEPTTPKPETELKKPDEVLTLLAPDIEAFYANIPAFIQPLSKNISSAVQDL RALSAVNTDPATAPDADAPTTHANHIARARARDRRVRTSMAPVPLLSSQLQARVRALRHTQLSELPVARRNMAAT AAEVVAARARVLERTVVTLERAKHGALARATKAKAEHLAVLAQGVEGKLEVTKLEIAATLYTPETLAALARYRQH LRQTKERLQHRRKMTIQELRDYGDVEVSDPVDIDADEGTFPDIARRYGVLAREIEEVKMEIARLEK* |
| Coding | >Pro_DTO377G3_2|g3800.t1 ATGCTTCCTCCCTGTGACCCCTCAATTCTTGAGCACAATCCTCAATTTAAACGACTATATGAGAATCTAACAACC TCGCTCCTCAATTCAGATGCCTCAACGCGTGCTCAAAGCGCGAGCCCAGCCCGTACAGCTGTGGTGGAAGAGCTG AAGCAATGCCAGACTCAAAATGCCAAAAAGCGAATCAAGGAACAAATGCTCCGGCAATTGGCCTTCGCCCCAGAC ACCAACCTCCCGGCGGAGTGCCACGATAACCTGGCCATAATCACCCTCTACCTAGAGACTCCATCGAGCGCAATC GAACCCACCACCCCAAAGCCAGAAACCGAACTCAAGAAACCAGACGAAGTACTCACCCTCCTAGCACCGGACATT GAAGCCTTCTACGCCAACATCCCAGCCTTCATCCAACCACTCTCCAAAAACATCTCATCTGCCGTTCAAGACCTA CGAGCTCTATCAGCCGTAAACACAGATCCAGCCACCGCGCCCGACGCAGACGCTCCAACCACACACGCGAACCAC ATCGCACGTGCCCGGGCACGCGATCGCCGAGTCCGGACGTCGATGGCGCCGGTCCCATTGCTCTCGTCACAGCTG CAGGCGCGGGTACGTGCGCTGCGCCACACACAGCTGTCCGAGCTGCCGGTTGCTCGGCGGAATATGGCTGCTACA GCTGCGGAGGTTGTTGCTGCGCGGGCGCGGGTTTTGGAGCGCACGGTTGTGACCCTGGAGCGGGCGAAGCATGGG GCTCTGGCGCGCGCGACGAAAGCCAAGGCAGAGCATTTGGCTGTGCTGGCGCAAGGCGTGGAGGGGAAATTAGAG GTTACAAAACTGGAGATTGCGGCTACGCTGTATACGCCGGAAACACTCGCTGCTCTTGCTCGGTATAGGCAGCAT CTCAGGCAGACGAAGGAGCGCCTGCAGCACCGTCGGAAGATGACGATTCAAGAGTTGAGAGATTATGGCGATGTC GAGGTGTCTGATCCGGTTGATATCGATGCGGATGAAGGGACTTTCCCGGATATTGCTCGTCGCTATGGGGTTTTA GCGAGGGAGATTGAAGAAGTAAAGATGGAAATTGCACGATTAGAGAAATGA |
| Transcript | >Pro_DTO377G3_2|g3800.t1 ATGCTTCCTCCCTGTGACCCCTCAATTCTTGAGCACAATCCTCAATTTAAACGACTATATGAGAATCTAACAACC TCGCTCCTCAATTCAGATGCCTCAACGCGTGCTCAAAGCGCGAGCCCAGCCCGTACAGCTGTGGTGGAAGAGCTG AAGCAATGCCAGACTCAAAATGCCAAAAAGCGAATCAAGGAACAAATGCTCCGGCAATTGGCCTTCGCCCCAGAC ACCAACCTCCCGGCGGAGTGCCACGATAACCTGGCCATAATCACCCTCTACCTAGAGACTCCATCGAGCGCAATC GAACCCACCACCCCAAAGCCAGAAACCGAACTCAAGAAACCAGACGAAGTACTCACCCTCCTAGCACCGGACATT GAAGCCTTCTACGCCAACATCCCAGCCTTCATCCAACCACTCTCCAAAAACATCTCATCTGCCGTTCAAGACCTA CGAGCTCTATCAGCCGTAAACACAGATCCAGCCACCGCGCCCGACGCAGACGCTCCAACCACACACGCGAACCAC ATCGCACGTGCCCGGGCACGCGATCGCCGAGTCCGGACGTCGATGGCGCCGGTCCCATTGCTCTCGTCACAGCTG CAGGCGCGGGTACGTGCGCTGCGCCACACACAGCTGTCCGAGCTGCCGGTTGCTCGGCGGAATATGGCTGCTACA GCTGCGGAGGTTGTTGCTGCGCGGGCGCGGGTTTTGGAGCGCACGGTTGTGACCCTGGAGCGGGCGAAGCATGGG GCTCTGGCGCGCGCGACGAAAGCCAAGGCAGAGCATTTGGCTGTGCTGGCGCAAGGCGTGGAGGGGAAATTAGAG GTTACAAAACTGGAGATTGCGGCTACGCTGTATACGCCGGAAACACTCGCTGCTCTTGCTCGGTATAGGCAGCAT CTCAGGCAGACGAAGGAGCGCCTGCAGCACCGTCGGAAGATGACGATTCAAGAGTTGAGAGATTATGGCGATGTC GAGGTGTCTGATCCGGTTGATATCGATGCGGATGAAGGGACTTTCCCGGATATTGCTCGTCGCTATGGGGTTTTA GCGAGGGAGATTGAAGAAGTAAAGATGGAAATTGCACGATTAGAGAAATGA |
| Gene | >Pro_DTO377G3_2|g3800.t1 ATGCTTCCTCCCTGTGACCCCTCAATTCTTGAGCACAATCCTCAATTTAAACGACTATATGAGAATCTAACAACC TCGCTCCTCAATTCAGATGCCTCAACGCGTGCTCAAAGCGCGAGCCCAGCCCGTACAGCTGTGGTGGAAGTAAGT GGTCGACGCGCTATGCAGCACATACCTAACGGACTTAAGCACGAACAGAGCTCTGACGACACTATCATTAGGAGC TGAAGCAATGCCAGACTCAAAATGCCAAAAAGCGAATCAAGGAACAAATGCTCCGGCAATTGGCCTTCGCCCCAG ACACCAACCTCCCGGCGGAGGTCAGTACAACCCCCACCAAGAAGAAACCACATCCCTAACAAACATACCAAATCT AGTGCCACGATAACCTGGCCATAATCACCCTCTACCTAGAGACTCCATCGAGCGCAATCGAACCCACCACCCCAA AGCCAGAAACCGAACTCAAGAAACCAGACGAAGTACTCACCCTCCTAGCACCGGACATTGAAGCCTTCTACGCCA ACATCCCAGCCTTCATCCAACCACTCTCCAAAAACATCTCATCTGCCGTTCAAGACCTACGAGCTCTATCAGCCG TAAACACAGATCCAGCCACCGCGCCCGACGCAGACGCTCCAACCACACACGCGAACCACATCGCACGTGCCCGGG CACGCGATCGCCGAGTCCGGACGTCGATGGCGCCGGTCCCATTGCTCTCGTCACAGCTGCAGGCGCGGGTACGTG CGCTGCGCCACACACAGCTGTCCGAGCTGCCGGTTGCTCGGCGGAATATGGCTGCTACAGCTGCGGAGGTTGTTG CTGCGCGGGCGCGGGTTTTGGAGCGCACGGTTGTGACCCTGGAGCGGGCGAAGCATGGGGCTCTGGCGCGCGCGA CGAAAGCCAAGGCAGAGCATTTGGCTGTGCTGGCGCAAGGCGTGGAGGGGAAATTAGAGTAAGTTCTGCCTTTCC AGCTTTCAAGTCTTGCTGTTGTCTTTCTGGTGGAGTTTGTTTAATGATTTCGACAGGGTTACAAAACTGGAGATT GCGGCTACGCTGTATACGCCGGAAACACTCGCTGCTCTTGCTCGGTATAGGCAGCATCTCAGGCAGACGAAGGAG CGCCTGCAGCACCGTCGGAAGATGACGATTCAAGAGTTGAGAGATTATGGCGATGTCGAGGTGTCTGATCCGGTT GATATCGATGCGGATGAAGGGACTTTCCCGGATATTGCTCGTCGCTATGGGGTTTTAGCGAGGGAGATTGAAGAA GTAAAGATGGAAATTGCACGATTAGAGAAATGA |