© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g38.t1 |
| Gene name | |
| Location | scaffold_01:89725..91378 |
| Strand | - |
| Gene length (bp) | 1653 |
| Transcript length (bp) | 1653 |
| Coding sequence length (bp) | 1653 |
| Protein length (aa) | 551 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.9E-85 | 57 | 509 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-17 | 81 | 433 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 99 | 121 | 22 |
| 3 | 134 | 153 | 19 |
| 4 | 157 | 179 | 22 |
| 5 | 186 | 208 | 22 |
| 6 | 228 | 250 | 22 |
| 7 | 312 | 334 | 22 |
| 8 | 349 | 371 | 22 |
| 9 | 376 | 398 | 22 |
| 10 | 408 | 430 | 22 |
| 11 | 443 | 465 | 22 |
| 12 | 475 | 492 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g38.t1 MDFKSAAQHVETPDDKSPMDVDPGTLVQEAQIATDKEHRMSLWQALKLYPKAIGWSVLISTAIVMEGYDVVLMGS FYGFPAFNQKYGHTLSDGSQGLSAAWQAGLSNAMNCGQILGLFANGIVSERFGYRKTMLGSLIATMAFIFILFFA PNVETLLVGEILMGIPLGVYQTLSVTYASEVCPVALRAYLTTYVNLCWVMGQLIASGVLKGLESRNDEWAYRIPF AIQWIWPVPIFIGVLMAPESPWWLVRKGRLQEAVKSLTRLTSRGNTDFNAEETVAMIIHTNEVEKQLNEGTSYFD CFRGTNLRRTEISCLIWAAQNLCGAGLMAYSTVFYQRAGLPVSQSFNMSLAQYAIGFFGTLFSWVLMSYLGRRTL YVYSLAVLCVILFVIGFIAIAPSTSATSWATGSMLLVYTFIYDSSAGPVCYSLVSEIPTIRLRIKTVVLARNLYN CFSIFNGVVIPYMLNVDGWNWRGKAGFFWGGLCLASFIWSFFRLPEPKGRTYAEMDALFEQKVSARKFASTKVNL FHEEETKEGIETKEEKEVIETKEDK* |
| Coding | >Pro_DTO377G3_2|g38.t1 ATGGATTTCAAATCGGCTGCCCAGCATGTCGAGACACCCGACGACAAGTCGCCAATGGACGTCGATCCTGGTACA TTGGTCCAGGAGGCCCAGATCGCCACCGACAAAGAACACCGCATGTCACTGTGGCAGGCTTTGAAGCTGTACCCG AAGGCAATTGGATGGTCTGTTCTGATCTCGACAGCAATTGTGATGGAGGGTTACGACGTCGTGCTCATGGGATCG TTCTACGGTTTCCCCGCCTTCAACCAAAAATATGGACACACACTTTCAGATGGCTCCCAAGGGCTCTCGGCAGCA TGGCAAGCAGGATTATCCAATGCTATGAATTGTGGTCAGATCCTGGGATTGTTTGCCAACGGTATCGTCTCCGAA CGATTTGGGTACCGCAAGACCATGTTGGGATCTCTCATTGCCACAATGGCCTTCATCTTCATTCTATTCTTTGCC CCCAATGTTGAGACGCTGCTGGTCGGTGAGATCCTAATGGGTATCCCTCTGGGAGTCTACCAGACCCTGTCTGTC ACTTATGCGTCCGAAGTCTGCCCTGTCGCCCTACGTGCCTACCTCACAACTTACGTCAACCTCTGCTGGGTAATG GGGCAGTTGATTGCCTCGGGCGTCTTGAAGGGTCTGGAGTCTCGAAATGACGAATGGGCTTACCGCATTCCATTT GCCATCCAGTGGATTTGGCCCGTTCCGATCTTCATTGGCGTTCTGATGGCTCCAGAGAGCCCCTGGTGGCTCGTC CGGAAGGGCCGACTACAGGAGGCCGTCAAATCTCTTACAAGGTTAACGTCTAGAGGAAACACCGACTTCAATGCG GAGGAGACTGTAGCCATGATCATCCATACCAACGAGGTCGAGAAACAGCTGAATGAAGGTACCAGCTACTTCGAT TGTTTCCGCGGTACCAATCTCCGCCGGACCGAGATCTCATGTTTGATCTGGGCAGCACAGAATCTCTGCGGAGCC GGTCTGATGGCATACTCGACTGTTTTCTACCAGCGAGCCGGATTGCCCGTCTCTCAGTCATTCAACATGTCCTTG GCTCAATACGCAATCGGTTTCTTTGGCACTCTCTTCTCCTGGGTTCTCATGTCCTATCTTGGTCGACGAACTTTG TATGTCTACAGTCTGGCTGTTCTTTGCGTCATCCTCTTTGTAATCGGATTTATCGCGATTGCCCCTTCAACGTCG GCTACCTCCTGGGCGACCGGCTCCATGCTCTTGGTCTACACCTTCATTTATGATTCCTCGGCCGGGCCTGTTTGC TATTCACTCGTGTCCGAAATTCCTACAATCCGGCTTCGCATCAAGACCGTGGTTCTCGCCCGCAATCTGTACAAC TGCTTCAGCATCTTCAACGGGGTGGTGATCCCGTATATGCTGAATGTGGATGGCTGGAACTGGAGAGGAAAGGCC GGCTTCTTCTGGGGTGGATTATGCCTTGCCTCCTTCATCTGGTCGTTCTTCCGCCTACCAGAACCCAAGGGTCGT ACTTATGCCGAGATGGACGCTTTGTTCGAACAAAAGGTCTCCGCCCGCAAGTTCGCGTCTACCAAGGTCAACCTT TTCCACGAGGAAGAGACCAAGGAAGGCATCGAGACAAAGGAAGAGAAGGAAGTCATCGAGACAAAGGAAGATAAA TGA |
| Transcript | >Pro_DTO377G3_2|g38.t1 ATGGATTTCAAATCGGCTGCCCAGCATGTCGAGACACCCGACGACAAGTCGCCAATGGACGTCGATCCTGGTACA TTGGTCCAGGAGGCCCAGATCGCCACCGACAAAGAACACCGCATGTCACTGTGGCAGGCTTTGAAGCTGTACCCG AAGGCAATTGGATGGTCTGTTCTGATCTCGACAGCAATTGTGATGGAGGGTTACGACGTCGTGCTCATGGGATCG TTCTACGGTTTCCCCGCCTTCAACCAAAAATATGGACACACACTTTCAGATGGCTCCCAAGGGCTCTCGGCAGCA TGGCAAGCAGGATTATCCAATGCTATGAATTGTGGTCAGATCCTGGGATTGTTTGCCAACGGTATCGTCTCCGAA CGATTTGGGTACCGCAAGACCATGTTGGGATCTCTCATTGCCACAATGGCCTTCATCTTCATTCTATTCTTTGCC CCCAATGTTGAGACGCTGCTGGTCGGTGAGATCCTAATGGGTATCCCTCTGGGAGTCTACCAGACCCTGTCTGTC ACTTATGCGTCCGAAGTCTGCCCTGTCGCCCTACGTGCCTACCTCACAACTTACGTCAACCTCTGCTGGGTAATG GGGCAGTTGATTGCCTCGGGCGTCTTGAAGGGTCTGGAGTCTCGAAATGACGAATGGGCTTACCGCATTCCATTT GCCATCCAGTGGATTTGGCCCGTTCCGATCTTCATTGGCGTTCTGATGGCTCCAGAGAGCCCCTGGTGGCTCGTC CGGAAGGGCCGACTACAGGAGGCCGTCAAATCTCTTACAAGGTTAACGTCTAGAGGAAACACCGACTTCAATGCG GAGGAGACTGTAGCCATGATCATCCATACCAACGAGGTCGAGAAACAGCTGAATGAAGGTACCAGCTACTTCGAT TGTTTCCGCGGTACCAATCTCCGCCGGACCGAGATCTCATGTTTGATCTGGGCAGCACAGAATCTCTGCGGAGCC GGTCTGATGGCATACTCGACTGTTTTCTACCAGCGAGCCGGATTGCCCGTCTCTCAGTCATTCAACATGTCCTTG GCTCAATACGCAATCGGTTTCTTTGGCACTCTCTTCTCCTGGGTTCTCATGTCCTATCTTGGTCGACGAACTTTG TATGTCTACAGTCTGGCTGTTCTTTGCGTCATCCTCTTTGTAATCGGATTTATCGCGATTGCCCCTTCAACGTCG GCTACCTCCTGGGCGACCGGCTCCATGCTCTTGGTCTACACCTTCATTTATGATTCCTCGGCCGGGCCTGTTTGC TATTCACTCGTGTCCGAAATTCCTACAATCCGGCTTCGCATCAAGACCGTGGTTCTCGCCCGCAATCTGTACAAC TGCTTCAGCATCTTCAACGGGGTGGTGATCCCGTATATGCTGAATGTGGATGGCTGGAACTGGAGAGGAAAGGCC GGCTTCTTCTGGGGTGGATTATGCCTTGCCTCCTTCATCTGGTCGTTCTTCCGCCTACCAGAACCCAAGGGTCGT ACTTATGCCGAGATGGACGCTTTGTTCGAACAAAAGGTCTCCGCCCGCAAGTTCGCGTCTACCAAGGTCAACCTT TTCCACGAGGAAGAGACCAAGGAAGGCATCGAGACAAAGGAAGAGAAGGAAGTCATCGAGACAAAGGAAGATAAA TGA |
| Gene | >Pro_DTO377G3_2|g38.t1 ATGGATTTCAAATCGGCTGCCCAGCATGTCGAGACACCCGACGACAAGTCGCCAATGGACGTCGATCCTGGTACA TTGGTCCAGGAGGCCCAGATCGCCACCGACAAAGAACACCGCATGTCACTGTGGCAGGCTTTGAAGCTGTACCCG AAGGCAATTGGATGGTCTGTTCTGATCTCGACAGCAATTGTGATGGAGGGTTACGACGTCGTGCTCATGGGATCG TTCTACGGTTTCCCCGCCTTCAACCAAAAATATGGACACACACTTTCAGATGGCTCCCAAGGGCTCTCGGCAGCA TGGCAAGCAGGATTATCCAATGCTATGAATTGTGGTCAGATCCTGGGATTGTTTGCCAACGGTATCGTCTCCGAA CGATTTGGGTACCGCAAGACCATGTTGGGATCTCTCATTGCCACAATGGCCTTCATCTTCATTCTATTCTTTGCC CCCAATGTTGAGACGCTGCTGGTCGGTGAGATCCTAATGGGTATCCCTCTGGGAGTCTACCAGACCCTGTCTGTC ACTTATGCGTCCGAAGTCTGCCCTGTCGCCCTACGTGCCTACCTCACAACTTACGTCAACCTCTGCTGGGTAATG GGGCAGTTGATTGCCTCGGGCGTCTTGAAGGGTCTGGAGTCTCGAAATGACGAATGGGCTTACCGCATTCCATTT GCCATCCAGTGGATTTGGCCCGTTCCGATCTTCATTGGCGTTCTGATGGCTCCAGAGAGCCCCTGGTGGCTCGTC CGGAAGGGCCGACTACAGGAGGCCGTCAAATCTCTTACAAGGTTAACGTCTAGAGGAAACACCGACTTCAATGCG GAGGAGACTGTAGCCATGATCATCCATACCAACGAGGTCGAGAAACAGCTGAATGAAGGTACCAGCTACTTCGAT TGTTTCCGCGGTACCAATCTCCGCCGGACCGAGATCTCATGTTTGATCTGGGCAGCACAGAATCTCTGCGGAGCC GGTCTGATGGCATACTCGACTGTTTTCTACCAGCGAGCCGGATTGCCCGTCTCTCAGTCATTCAACATGTCCTTG GCTCAATACGCAATCGGTTTCTTTGGCACTCTCTTCTCCTGGGTTCTCATGTCCTATCTTGGTCGACGAACTTTG TATGTCTACAGTCTGGCTGTTCTTTGCGTCATCCTCTTTGTAATCGGATTTATCGCGATTGCCCCTTCAACGTCG GCTACCTCCTGGGCGACCGGCTCCATGCTCTTGGTCTACACCTTCATTTATGATTCCTCGGCCGGGCCTGTTTGC TATTCACTCGTGTCCGAAATTCCTACAATCCGGCTTCGCATCAAGACCGTGGTTCTCGCCCGCAATCTGTACAAC TGCTTCAGCATCTTCAACGGGGTGGTGATCCCGTATATGCTGAATGTGGATGGCTGGAACTGGAGAGGAAAGGCC GGCTTCTTCTGGGGTGGATTATGCCTTGCCTCCTTCATCTGGTCGTTCTTCCGCCTACCAGAACCCAAGGGTCGT ACTTATGCCGAGATGGACGCTTTGTTCGAACAAAAGGTCTCCGCCCGCAAGTTCGCGTCTACCAAGGTCAACCTT TTCCACGAGGAAGAGACCAAGGAAGGCATCGAGACAAAGGAAGAGAAGGAAGTCATCGAGACAAAGGAAGATAAA TGA |