Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3789.t1
Gene name
Locationscaffold_06:768136..769468
Strand-
Gene length (bp)1332
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05712 MRG MRG 6.7E-55 120 302
PF11717 Tudor-knot RNA binding activity-knot of a chromodomain 4.9E-08 11 64

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3789.t1
MAPISMYSKDEKVLCFHHEILYDAKILDVRHKDSTDKKSPFEYQVHYKGWKNTWDDWVLEDRLRKHTEDNRELAS
NLRREAEASFRLKNTKITAKKRAGSDRDSVRDSEERGSVPSRGTKRARDSEIEKEESFNIRPSVRIVMPDNLKSL
LVDDWEQVTKNQCVVSLPAKYPVRQILQDWHEEELPKRSGSSADEDVLEEVVAGIQEYFDKCLDKILLYRHERPQ
YRGLRKKFEAATGELADKGPIDVYGAEHLIRLFSTMPELIAQTNMDMQATNRLREEISKLSMWLSKNSEKYFATS
YQPAESTH*
Coding >Pro_DTO377G3_2|g3789.t1
ATGGCTCCTATTTCTATGTATAGCAAAGACGAGAAGGTCCTTTGCTTCCACCATGAGATCCTTTACGATGCCAAG
ATCCTGGATGTTCGCCACAAGGACTCCACTGACAAAAAGAGCCCCTTTGAATATCAAGTCCACTACAAGGGCTGG
AAGAATACCTGGGATGACTGGGTCCTGGAGGACCGTCTTCGCAAGCACACCGAAGACAACCGCGAATTGGCCAGC
AATCTGCGTCGGGAAGCTGAAGCTTCATTCCGTCTAAAGAACACCAAGATCACTGCTAAGAAGCGTGCGGGTTCC
GACCGTGACTCTGTGCGGGACAGCGAGGAGCGCGGCTCCGTGCCCAGCCGTGGCACCAAGCGAGCCCGTGATAGT
GAAATCGAAAAGGAGGAGAGCTTCAATATCCGCCCCTCTGTGCGCATCGTCATGCCAGACAATTTGAAGTCCCTA
CTTGTCGATGACTGGGAGCAGGTAACCAAGAACCAGTGCGTCGTCTCTTTGCCGGCGAAGTACCCAGTCCGCCAG
ATCCTGCAAGACTGGCACGAGGAAGAGCTCCCAAAGCGGTCGGGCTCGTCGGCAGACGAGGACGTGCTGGAGGAA
GTGGTCGCCGGGATCCAGGAGTACTTCGACAAGTGTCTGGATAAGATTCTTCTCTACCGCCACGAGCGCCCCCAG
TACCGTGGCCTGCGTAAGAAGTTCGAGGCCGCTACCGGGGAACTGGCCGATAAGGGCCCCATCGATGTATACGGG
GCGGAGCACCTGATCCGCTTGTTCAGCACTATGCCTGAGTTGATTGCTCAGACCAACATGGACATGCAGGCTACG
AATCGCCTGCGAGAGGAGATCTCGAAGCTGTCCATGTGGTTGAGCAAGAACTCCGAGAAGTACTTCGCTACCAGC
TACCAGCCGGCGGAGAGCACTCACTGA
Transcript >Pro_DTO377G3_2|g3789.t1
ATGGCTCCTATTTCTATGTATAGCAAAGACGAGAAGGTCCTTTGCTTCCACCATGAGATCCTTTACGATGCCAAG
ATCCTGGATGTTCGCCACAAGGACTCCACTGACAAAAAGAGCCCCTTTGAATATCAAGTCCACTACAAGGGCTGG
AAGAATACCTGGGATGACTGGGTCCTGGAGGACCGTCTTCGCAAGCACACCGAAGACAACCGCGAATTGGCCAGC
AATCTGCGTCGGGAAGCTGAAGCTTCATTCCGTCTAAAGAACACCAAGATCACTGCTAAGAAGCGTGCGGGTTCC
GACCGTGACTCTGTGCGGGACAGCGAGGAGCGCGGCTCCGTGCCCAGCCGTGGCACCAAGCGAGCCCGTGATAGT
GAAATCGAAAAGGAGGAGAGCTTCAATATCCGCCCCTCTGTGCGCATCGTCATGCCAGACAATTTGAAGTCCCTA
CTTGTCGATGACTGGGAGCAGGTAACCAAGAACCAGTGCGTCGTCTCTTTGCCGGCGAAGTACCCAGTCCGCCAG
ATCCTGCAAGACTGGCACGAGGAAGAGCTCCCAAAGCGGTCGGGCTCGTCGGCAGACGAGGACGTGCTGGAGGAA
GTGGTCGCCGGGATCCAGGAGTACTTCGACAAGTGTCTGGATAAGATTCTTCTCTACCGCCACGAGCGCCCCCAG
TACCGTGGCCTGCGTAAGAAGTTCGAGGCCGCTACCGGGGAACTGGCCGATAAGGGCCCCATCGATGTATACGGG
GCGGAGCACCTGATCCGCTTGTTCAGCACTATGCCTGAGTTGATTGCTCAGACCAACATGGACATGCAGGCTACG
AATCGCCTGCGAGAGGAGATCTCGAAGCTGTCCATGTGGTTGAGCAAGAACTCCGAGAAGTACTTCGCTACCAGC
TACCAGCCGGCGGAGAGCACTCACTGA
Gene >Pro_DTO377G3_2|g3789.t1
ATGGCTCCTATTTCTATGTATAGCAAAGACGAGAAGGTCCTTTGCTTCCACCATGAGATCCTTTACGATGCCAAG
ATCCTGGATGTTCGCCACAAGGACTCCACTGACAAAAAGAGCCCCTTTGAATATCAAGTCCACTACAAGGGCTGG
AAGAATACGTAAGTCTGGCTTGTTTCATTTCTTCCCCTGTTTATCTACGTCCTGGCGGTGTCAAGATCGTTCCCC
TCCAAAACCTTGGAAAGTTTGTCCGGGCCAATACGGAAGACTTGAACTCGACTTTGAGCTATGCACACTCTCTGT
TATGCAGAATTGCGTCTTGTTTTCTGCCGCACATGTTTCAGAAAAGAATATATCCATCATTCGATTTCGTGGAAC
ATTCTAACATTGGAACAGCTGGGATGACTGGGTCCTGGAGGACCGTCTTCGCAAGCACACCGAAGACAACCGCGA
ATTGGCCAGCAATCTGCGTCGGGAAGCTGAAGCTTCATTCCGTCTAAAGAACACCAAGATCACTGCTAAGAAGCG
TGCGGGTTCCGACCGTGACTCTGTGCGGGACAGCGAGGAGCGCGGCTCCGTGCCCAGCCGTGGCACCAAGCGAGC
CCGTGATAGTGAAATCGAAAAGGTATGCAATTAACACATCAAATCGGGTGCAATGGAACCAAACCCAAGAAAATA
AAATACAAAAGGACCGTATTATTTATGATCCCATACTAACAATCTTCAGGAGGAGAGCTTCAATATCCGCCCCTC
TGTGCGCATCGTCATGCCAGACAATTTGAAGTCCCTACTTGTCGATGACTGGGAGCAGGTAACCAAGAACCAGTG
CGTCGTCTCTTTGCCGGCGAAGTACCCAGTCCGCCAGATCCTGCAAGACTGGCACGAGGAAGAGCTCCCAAAGCG
GTCGGGCTCGTCGGCAGACGAGGACGTGCTGGAGGAAGTGGTCGCCGGGATCCAGGAGTACTTCGACAAGTGTCT
GGATAAGATTCTTCTCTACCGCCACGAGCGCCCCCAGTACCGTGGCCTGCGTAAGAAGTTCGAGGCCGCTACCGG
GGAACTGGCCGATAAGGGCCCCATCGATGTATACGGGGCGGAGCACCTGATCCGCTTGTTCAGTATGTACTCACC
TTACTTCTGCTTCAACTGTGAGAGTTGGGAATCGTACTAACCGTTGCGTGTGTAGGCACTATGCCTGAGTTGATT
GCTCAGACCAACATGGACATGCAGGCTACGAATCGCCTGCGAGAGGAGATCTCGAAGCTGTCCATGTGGTTGAGC
AAGAACTCCGAGAAGTACTTCGCTACCAGCTACCAGCCGGCGGAGAGCACTCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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