Protein ID | Pro_DTO377G3_2|g3789.t1 |
Gene name | |
Location | scaffold_06:768136..769468 |
Strand | - |
Gene length (bp) | 1332 |
Transcript length (bp) | 927 |
Coding sequence length (bp) | 927 |
Protein length (aa) | 309 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05712 | MRG | MRG | 6.7E-55 | 120 | 302 |
PF11717 | Tudor-knot | RNA binding activity-knot of a chromodomain | 4.9E-08 | 11 | 64 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3789.t1 MAPISMYSKDEKVLCFHHEILYDAKILDVRHKDSTDKKSPFEYQVHYKGWKNTWDDWVLEDRLRKHTEDNRELAS NLRREAEASFRLKNTKITAKKRAGSDRDSVRDSEERGSVPSRGTKRARDSEIEKEESFNIRPSVRIVMPDNLKSL LVDDWEQVTKNQCVVSLPAKYPVRQILQDWHEEELPKRSGSSADEDVLEEVVAGIQEYFDKCLDKILLYRHERPQ YRGLRKKFEAATGELADKGPIDVYGAEHLIRLFSTMPELIAQTNMDMQATNRLREEISKLSMWLSKNSEKYFATS YQPAESTH* |
Coding | >Pro_DTO377G3_2|g3789.t1 ATGGCTCCTATTTCTATGTATAGCAAAGACGAGAAGGTCCTTTGCTTCCACCATGAGATCCTTTACGATGCCAAG ATCCTGGATGTTCGCCACAAGGACTCCACTGACAAAAAGAGCCCCTTTGAATATCAAGTCCACTACAAGGGCTGG AAGAATACCTGGGATGACTGGGTCCTGGAGGACCGTCTTCGCAAGCACACCGAAGACAACCGCGAATTGGCCAGC AATCTGCGTCGGGAAGCTGAAGCTTCATTCCGTCTAAAGAACACCAAGATCACTGCTAAGAAGCGTGCGGGTTCC GACCGTGACTCTGTGCGGGACAGCGAGGAGCGCGGCTCCGTGCCCAGCCGTGGCACCAAGCGAGCCCGTGATAGT GAAATCGAAAAGGAGGAGAGCTTCAATATCCGCCCCTCTGTGCGCATCGTCATGCCAGACAATTTGAAGTCCCTA CTTGTCGATGACTGGGAGCAGGTAACCAAGAACCAGTGCGTCGTCTCTTTGCCGGCGAAGTACCCAGTCCGCCAG ATCCTGCAAGACTGGCACGAGGAAGAGCTCCCAAAGCGGTCGGGCTCGTCGGCAGACGAGGACGTGCTGGAGGAA GTGGTCGCCGGGATCCAGGAGTACTTCGACAAGTGTCTGGATAAGATTCTTCTCTACCGCCACGAGCGCCCCCAG TACCGTGGCCTGCGTAAGAAGTTCGAGGCCGCTACCGGGGAACTGGCCGATAAGGGCCCCATCGATGTATACGGG GCGGAGCACCTGATCCGCTTGTTCAGCACTATGCCTGAGTTGATTGCTCAGACCAACATGGACATGCAGGCTACG AATCGCCTGCGAGAGGAGATCTCGAAGCTGTCCATGTGGTTGAGCAAGAACTCCGAGAAGTACTTCGCTACCAGC TACCAGCCGGCGGAGAGCACTCACTGA |
Transcript | >Pro_DTO377G3_2|g3789.t1 ATGGCTCCTATTTCTATGTATAGCAAAGACGAGAAGGTCCTTTGCTTCCACCATGAGATCCTTTACGATGCCAAG ATCCTGGATGTTCGCCACAAGGACTCCACTGACAAAAAGAGCCCCTTTGAATATCAAGTCCACTACAAGGGCTGG AAGAATACCTGGGATGACTGGGTCCTGGAGGACCGTCTTCGCAAGCACACCGAAGACAACCGCGAATTGGCCAGC AATCTGCGTCGGGAAGCTGAAGCTTCATTCCGTCTAAAGAACACCAAGATCACTGCTAAGAAGCGTGCGGGTTCC GACCGTGACTCTGTGCGGGACAGCGAGGAGCGCGGCTCCGTGCCCAGCCGTGGCACCAAGCGAGCCCGTGATAGT GAAATCGAAAAGGAGGAGAGCTTCAATATCCGCCCCTCTGTGCGCATCGTCATGCCAGACAATTTGAAGTCCCTA CTTGTCGATGACTGGGAGCAGGTAACCAAGAACCAGTGCGTCGTCTCTTTGCCGGCGAAGTACCCAGTCCGCCAG ATCCTGCAAGACTGGCACGAGGAAGAGCTCCCAAAGCGGTCGGGCTCGTCGGCAGACGAGGACGTGCTGGAGGAA GTGGTCGCCGGGATCCAGGAGTACTTCGACAAGTGTCTGGATAAGATTCTTCTCTACCGCCACGAGCGCCCCCAG TACCGTGGCCTGCGTAAGAAGTTCGAGGCCGCTACCGGGGAACTGGCCGATAAGGGCCCCATCGATGTATACGGG GCGGAGCACCTGATCCGCTTGTTCAGCACTATGCCTGAGTTGATTGCTCAGACCAACATGGACATGCAGGCTACG AATCGCCTGCGAGAGGAGATCTCGAAGCTGTCCATGTGGTTGAGCAAGAACTCCGAGAAGTACTTCGCTACCAGC TACCAGCCGGCGGAGAGCACTCACTGA |
Gene | >Pro_DTO377G3_2|g3789.t1 ATGGCTCCTATTTCTATGTATAGCAAAGACGAGAAGGTCCTTTGCTTCCACCATGAGATCCTTTACGATGCCAAG ATCCTGGATGTTCGCCACAAGGACTCCACTGACAAAAAGAGCCCCTTTGAATATCAAGTCCACTACAAGGGCTGG AAGAATACGTAAGTCTGGCTTGTTTCATTTCTTCCCCTGTTTATCTACGTCCTGGCGGTGTCAAGATCGTTCCCC TCCAAAACCTTGGAAAGTTTGTCCGGGCCAATACGGAAGACTTGAACTCGACTTTGAGCTATGCACACTCTCTGT TATGCAGAATTGCGTCTTGTTTTCTGCCGCACATGTTTCAGAAAAGAATATATCCATCATTCGATTTCGTGGAAC ATTCTAACATTGGAACAGCTGGGATGACTGGGTCCTGGAGGACCGTCTTCGCAAGCACACCGAAGACAACCGCGA ATTGGCCAGCAATCTGCGTCGGGAAGCTGAAGCTTCATTCCGTCTAAAGAACACCAAGATCACTGCTAAGAAGCG TGCGGGTTCCGACCGTGACTCTGTGCGGGACAGCGAGGAGCGCGGCTCCGTGCCCAGCCGTGGCACCAAGCGAGC CCGTGATAGTGAAATCGAAAAGGTATGCAATTAACACATCAAATCGGGTGCAATGGAACCAAACCCAAGAAAATA AAATACAAAAGGACCGTATTATTTATGATCCCATACTAACAATCTTCAGGAGGAGAGCTTCAATATCCGCCCCTC TGTGCGCATCGTCATGCCAGACAATTTGAAGTCCCTACTTGTCGATGACTGGGAGCAGGTAACCAAGAACCAGTG CGTCGTCTCTTTGCCGGCGAAGTACCCAGTCCGCCAGATCCTGCAAGACTGGCACGAGGAAGAGCTCCCAAAGCG GTCGGGCTCGTCGGCAGACGAGGACGTGCTGGAGGAAGTGGTCGCCGGGATCCAGGAGTACTTCGACAAGTGTCT GGATAAGATTCTTCTCTACCGCCACGAGCGCCCCCAGTACCGTGGCCTGCGTAAGAAGTTCGAGGCCGCTACCGG GGAACTGGCCGATAAGGGCCCCATCGATGTATACGGGGCGGAGCACCTGATCCGCTTGTTCAGTATGTACTCACC TTACTTCTGCTTCAACTGTGAGAGTTGGGAATCGTACTAACCGTTGCGTGTGTAGGCACTATGCCTGAGTTGATT GCTCAGACCAACATGGACATGCAGGCTACGAATCGCCTGCGAGAGGAGATCTCGAAGCTGTCCATGTGGTTGAGC AAGAACTCCGAGAAGTACTTCGCTACCAGCTACCAGCCGGCGGAGAGCACTCACTGA |