Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3785.t1
Gene name
Locationscaffold_06:760899..761743
Strand+
Gene length (bp)844
Transcript length (bp)672
Coding sequence length (bp)672
Protein length (aa) 224

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05008 V-SNARE Vesicle transport v-SNARE protein N-terminus 3.5E-20 21 97
PF12352 V-SNARE_C Snare region anchored in the vesicle membrane C-terminus 1.8E-15 131 196

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0006886 intracellular protein transport Yes
GO:0005575 cellular_component No
GO:0071705 nitrogen compound transport No
GO:0051649 establishment of localization in cell No
GO:0051179 localization No
GO:0045184 establishment of protein localization No
GO:0015833 peptide transport No
GO:0033036 macromolecule localization No
GO:0015031 protein transport No
GO:0046907 intracellular transport No
GO:0006810 transport No
GO:0042886 amide transport No
GO:0071702 organic substance transport No
GO:0051641 cellular localization No
GO:0051234 establishment of localization No
GO:0008104 protein localization No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

Domain # Start End Length
1 197 219 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3785.t1
MSNLNTDAGSEMFASYENELKLVQADLNQKLDQIAEASGEQRKSAIGNATQVLEEATELLDQMRMEKQNIPSAAR
SKVNIRFRNYSTDIDEVKRKLKSLSDDRQALFGDRYTDEPQDEHLEQRQQLLSGTDRLERSSARLQQSQRMALET
EDVARGTLGTLYEQREQITNARNNLQQSEGYVDTSIKTLRGMARRMATNRMITIAIITVLVLLIFAVIFSKFH*
Coding >Pro_DTO377G3_2|g3785.t1
ATGTCAAACCTGAACACAGATGCCGGCTCGGAGATGTTCGCCAGCTACGAGAACGAGTTGAAGCTGGTGCAAGCC
GATCTGAACCAGAAGCTGGACCAGATCGCCGAGGCAAGCGGCGAGCAACGGAAATCAGCAATCGGCAACGCAACG
CAAGTCCTCGAAGAAGCAACAGAACTGCTCGACCAAATGCGCATGGAGAAGCAGAACATCCCCTCCGCAGCCCGG
TCAAAAGTCAACATCCGCTTCCGCAACTACTCAACCGATATCGACGAGGTCAAGCGCAAGCTCAAGTCCCTCTCG
GATGACCGGCAAGCACTATTCGGCGACCGATACACCGACGAGCCGCAGGATGAGCACCTCGAACAAAGACAGCAG
TTGCTGTCCGGTACGGACCGGCTAGAGCGCAGTTCGGCACGGCTGCAGCAGAGTCAGCGCATGGCCCTGGAGACC
GAGGATGTTGCTCGCGGCACGCTCGGCACACTGTACGAGCAGAGGGAGCAGATCACGAATGCTCGGAACAACTTG
CAGCAGAGTGAGGGTTACGTTGATACTAGTATCAAGACTTTGAGGGGCATGGCCCGTAGGATGGCTACCAATCGG
ATGATCACTATTGCGATTATTACGGTTCTGGTTCTTTTGATTTTCGCTGTCATTTTCAGCAAGTTCCATTAG
Transcript >Pro_DTO377G3_2|g3785.t1
ATGTCAAACCTGAACACAGATGCCGGCTCGGAGATGTTCGCCAGCTACGAGAACGAGTTGAAGCTGGTGCAAGCC
GATCTGAACCAGAAGCTGGACCAGATCGCCGAGGCAAGCGGCGAGCAACGGAAATCAGCAATCGGCAACGCAACG
CAAGTCCTCGAAGAAGCAACAGAACTGCTCGACCAAATGCGCATGGAGAAGCAGAACATCCCCTCCGCAGCCCGG
TCAAAAGTCAACATCCGCTTCCGCAACTACTCAACCGATATCGACGAGGTCAAGCGCAAGCTCAAGTCCCTCTCG
GATGACCGGCAAGCACTATTCGGCGACCGATACACCGACGAGCCGCAGGATGAGCACCTCGAACAAAGACAGCAG
TTGCTGTCCGGTACGGACCGGCTAGAGCGCAGTTCGGCACGGCTGCAGCAGAGTCAGCGCATGGCCCTGGAGACC
GAGGATGTTGCTCGCGGCACGCTCGGCACACTGTACGAGCAGAGGGAGCAGATCACGAATGCTCGGAACAACTTG
CAGCAGAGTGAGGGTTACGTTGATACTAGTATCAAGACTTTGAGGGGCATGGCCCGTAGGATGGCTACCAATCGG
ATGATCACTATTGCGATTATTACGGTTCTGGTTCTTTTGATTTTCGCTGTCATTTTCAGCAAGTTCCATTAG
Gene >Pro_DTO377G3_2|g3785.t1
ATGTCAAACCTGAACACAGATGCCGGCTCGGAGATGTTCGCCAGCTACGAGAACGAGTTGAAGCTGGTGCAAGCC
GATCTGAACCAGAAGCTGGACCAGATCGCCGAGGCAAGCGGCGAGCAACGGAAATCAGCAATCGGCAACGCAACG
CAAGTCCTCGAAGAAGCAACAGAACTGGTGAGTCCACCGAACCCCTCACCCGGTTTTCATGCGCCGCAATGCGAG
AACAACGAACAAACACAAGAACAGAACAAACTAACCCGATCAAACCCCATCTAGCTCGACCAAATGCGCATGGAG
AAGCAGAACATCCCCTCCGCAGCCCGGTCAAAAGTCAACATCCGCTTCCGCAACTACTCAACCGATATCGACGAG
GTCAAGCGCAAGCTCAAGTCCCTCTCGGATGACCGGCAAGCACTATTCGGCGACCGATACACCGACGAGCCGCAG
GATGAGCACCTCGAACAAAGACAGCAGTTGCTGTCCGGTACGGACCGGCTAGAGCGCAGTTCGGCACGGCTGCAG
CAGAGTCAGCGCATGGCCCTGGAGACCGAGGATGTTGCTCGCGGCACGCTCGGCACACTGTACGAGCAGAGGGAG
CAGATCACGAATGCTCGGAACAACTTGCAGCAGAGTGAGGGTTACGTTGATACTAGTATCAAGACTTTGAGGGGC
ATGGCCCGTAGGTACTGACTCCCCTTTTGTCTTGTTCTTCTATATATAGACGTGATTGCTGACCTCTTGTGTGTT
GTTTAGGATGGCTACCAATCGGATGATCACTATTGCGATTATTACGGTTCTGGTTCTTTTGATTTTCGCTGTCAT
TTTCAGCAAGTTCCATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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