Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3784.t1
Gene name
Location	scaffold_06:758819..760395
Strand	+
Gene length (bp)	1576
Transcript length (bp)	1374
Coding sequence length (bp)	1374
Protein length (aa)	458

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06068	TIP49	TIP49 P-loop domain	3.4E-167	15	367
PF17856	TIP49_C	TIP49 AAA-lid domain	1.5E-19	374	440
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	4.2E-07	67	117
PF05496	RuvB_N	Holliday junction DNA helicase RuvB P-loop domain	9.7E-07	38	92

GO

GO Term	Description	Terminal node
GO:0016887	ATP hydrolysis activity	Yes
GO:0006310	DNA recombination	Yes
GO:0005524	ATP binding	Yes
GO:0009378	four-way junction helicase activity	Yes
GO:0006281	DNA repair	Yes
GO:0140657	ATP-dependent activity	No
GO:0004386	helicase activity	No
GO:0000166	nucleotide binding	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0003678	DNA helicase activity	No
GO:0030554	adenyl nucleotide binding	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0016462	pyrophosphatase activity	No
GO:0097367	carbohydrate derivative binding	No
GO:0017076	purine nucleotide binding	No
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	No
GO:0008152	metabolic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008150	biological_process	No
GO:0008094	ATP-dependent activity, acting on DNA	No
GO:0043167	ion binding	No
GO:0006259	DNA metabolic process	No
GO:0033554	cellular response to stress	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032553	ribonucleotide binding	No
GO:0050896	response to stimulus	No
GO:0017111	nucleoside-triphosphatase activity	No
GO:1901265	nucleoside phosphate binding	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0044238	primary metabolic process	No
GO:0009987	cellular process	No
GO:0016817	hydrolase activity, acting on acid anhydrides	No
GO:0140097	catalytic activity, acting on DNA	No
GO:0051716	cellular response to stimulus	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0043168	anion binding	No
GO:1901363	heterocyclic compound binding	No
GO:0003824	catalytic activity	No
GO:0016787	hydrolase activity	No
GO:0032555	purine ribonucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:0006974	cellular response to DNA damage stimulus	No
GO:0006950	response to stress	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:0036094	small molecule binding	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0005488	binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3784.t1 MVQISEVKGNSRENRTAAHTHIRGLGLRSDGTPELNADGFVGQGAAREACGVVVDLIKSKKMAGRAVLLAGGPGT GKTALALAVSQELGTKVPFCPIVGSEIYSAEVKKTEALMENFRRAIGLRVRETKEVYEGEVTELTPEEAENPLGG YGRTISHLIIGLKSAKGSKKLRLDPSIYEAIQKERVTVGDVIYIEANTGSCKRVGRSDAYATEFDLEAEEYVPVP KGEVHKKKEIVQDVTLHDLDMANARPQGGQDVMSMMGQLMKPKKTEITDKLRQEINKVVNRYIDQGVAELVPGVL FIDEVHMLDIECFTYLNRALESTISPIVILASNRGHAVIRGTEISAAHGIPPDLLARLLIIPTNPYAPEEIKTII RLRAKIEGLNITEPALNKVADHGSKVSLRYALQLLTPASILSRVNGRPGAIEEADIAECEDLFLDAKRSAIIVDQ DSKNFLL*
Coding	>Pro_DTO377G3_2\|g3784.t1 ATGGTCCAGATTAGTGAAGTGAAGGGGAACTCGCGCGAGAACAGAACCGCAGCGCATACACACATTCGGGGTCTA GGCTTACGCTCTGATGGGACCCCGGAGCTCAATGCGGATGGATTCGTGGGACAAGGAGCTGCCCGTGAGGCATGC GGTGTTGTGGTGGACTTGATCAAGTCAAAGAAGATGGCTGGACGAGCTGTGCTGCTTGCTGGTGGCCCTGGTACC GGAAAAACTGCTCTTGCTCTTGCTGTATCGCAGGAGCTAGGAACTAAGGTTCCTTTCTGCCCTATTGTTGGCAGT GAAATCTATTCCGCTGAGGTCAAGAAGACTGAAGCACTGATGGAGAACTTCCGGAGAGCTATTGGCCTCCGTGTT CGCGAAACAAAGGAAGTTTATGAGGGAGAGGTGACAGAGCTTACCCCCGAGGAGGCTGAGAACCCACTGGGCGGA TACGGGCGCACAATTAGCCACCTGATCATCGGATTGAAGTCCGCTAAGGGCTCCAAGAAGCTGCGCCTGGACCCT AGCATCTACGAAGCCATCCAGAAAGAGCGTGTCACAGTCGGAGATGTCATCTACATTGAAGCCAACACCGGCTCA TGCAAGCGAGTCGGGCGATCCGATGCCTATGCTACCGAATTCGATCTTGAGGCTGAGGAGTATGTGCCTGTCCCC AAGGGTGAGGTTCACAAGAAGAAGGAGATTGTTCAGGATGTGACCCTTCACGACCTGGATATGGCCAACGCCCGA CCCCAGGGCGGACAAGACGTGATGAGTATGATGGGCCAGCTGATGAAGCCCAAGAAGACGGAAATCACGGACAAG TTGCGCCAGGAAATCAACAAGGTTGTCAACAGGTACATTGATCAGGGTGTCGCAGAGTTGGTTCCCGGTGTTCTC TTCATCGATGAGGTGCACATGCTCGACATTGAGTGCTTCACATATCTGAACCGCGCCCTCGAATCGACCATCTCC CCGATTGTCATCCTCGCCTCCAACCGTGGCCACGCCGTTATTCGCGGTACTGAAATCAGTGCCGCACACGGTATC CCACCTGATCTGCTTGCCCGCCTTCTTATCATCCCCACCAACCCCTACGCCCCCGAGGAGATCAAGACTATCATC CGGCTGCGCGCCAAGATTGAAGGCCTCAATATCACAGAGCCTGCCTTGAACAAGGTCGCTGACCATGGAAGCAAG GTCAGCTTGCGGTATGCCCTGCAGCTGTTGACCCCCGCAAGCATTCTCTCGCGTGTCAATGGCCGCCCCGGCGCA ATTGAGGAGGCTGATATTGCGGAGTGCGAGGATCTCTTCCTGGATGCCAAGCGTAGCGCAATCATTGTTGATCAA GATAGCAAGAATTTCCTGTTATAA
Transcript	>Pro_DTO377G3_2\|g3784.t1 ATGGTCCAGATTAGTGAAGTGAAGGGGAACTCGCGCGAGAACAGAACCGCAGCGCATACACACATTCGGGGTCTA GGCTTACGCTCTGATGGGACCCCGGAGCTCAATGCGGATGGATTCGTGGGACAAGGAGCTGCCCGTGAGGCATGC GGTGTTGTGGTGGACTTGATCAAGTCAAAGAAGATGGCTGGACGAGCTGTGCTGCTTGCTGGTGGCCCTGGTACC GGAAAAACTGCTCTTGCTCTTGCTGTATCGCAGGAGCTAGGAACTAAGGTTCCTTTCTGCCCTATTGTTGGCAGT GAAATCTATTCCGCTGAGGTCAAGAAGACTGAAGCACTGATGGAGAACTTCCGGAGAGCTATTGGCCTCCGTGTT CGCGAAACAAAGGAAGTTTATGAGGGAGAGGTGACAGAGCTTACCCCCGAGGAGGCTGAGAACCCACTGGGCGGA TACGGGCGCACAATTAGCCACCTGATCATCGGATTGAAGTCCGCTAAGGGCTCCAAGAAGCTGCGCCTGGACCCT AGCATCTACGAAGCCATCCAGAAAGAGCGTGTCACAGTCGGAGATGTCATCTACATTGAAGCCAACACCGGCTCA TGCAAGCGAGTCGGGCGATCCGATGCCTATGCTACCGAATTCGATCTTGAGGCTGAGGAGTATGTGCCTGTCCCC AAGGGTGAGGTTCACAAGAAGAAGGAGATTGTTCAGGATGTGACCCTTCACGACCTGGATATGGCCAACGCCCGA CCCCAGGGCGGACAAGACGTGATGAGTATGATGGGCCAGCTGATGAAGCCCAAGAAGACGGAAATCACGGACAAG TTGCGCCAGGAAATCAACAAGGTTGTCAACAGGTACATTGATCAGGGTGTCGCAGAGTTGGTTCCCGGTGTTCTC TTCATCGATGAGGTGCACATGCTCGACATTGAGTGCTTCACATATCTGAACCGCGCCCTCGAATCGACCATCTCC CCGATTGTCATCCTCGCCTCCAACCGTGGCCACGCCGTTATTCGCGGTACTGAAATCAGTGCCGCACACGGTATC CCACCTGATCTGCTTGCCCGCCTTCTTATCATCCCCACCAACCCCTACGCCCCCGAGGAGATCAAGACTATCATC CGGCTGCGCGCCAAGATTGAAGGCCTCAATATCACAGAGCCTGCCTTGAACAAGGTCGCTGACCATGGAAGCAAG GTCAGCTTGCGGTATGCCCTGCAGCTGTTGACCCCCGCAAGCATTCTCTCGCGTGTCAATGGCCGCCCCGGCGCA ATTGAGGAGGCTGATATTGCGGAGTGCGAGGATCTCTTCCTGGATGCCAAGCGTAGCGCAATCATTGTTGATCAA GATAGCAAGAATTTCCTGTTATAA
Gene	>Pro_DTO377G3_2\|g3784.t1 ATGGTCCAGATTAGTGAAGTGAAGGGGAACTCGCGCGAGAACAGAACCGCAGCGCATACACACATTCGGGGTCTA GGCTTACGCTCTGATGGGACCCCGGAGCTCAATGCGGATGGATTCGTGGGACAAGGAGCTGCCCGTGAGGTGAGT GGATAGCAACACTGAATCCAGGGTATCTGGTTCGCAGTAACGATAACTAACGGTTTAAACCATCGGCAGGCATGC GGTGTTGTGGTGGACTTGATCAAGTCAAAGAAGATGGCTGGACGAGCTGTGCTGCTTGCTGGTGGCCCTGGTACC GGAAAAACTGCTCTTGCTCTTGCTGTATCGCAGGAGCTAGGAACTAAGGTTCCTTTCTGCCCTATTGTTGGCAGT GAAATCTATTCCGCTGAGGTCAAGAAGACTGAAGCACTGATGGAGAACTTCCGGAGAGCTATTGGTACGCAATAC GACATCAGGGAAAAACGCCACAAGCTAGAAAATTAAGCTAACGCATGACAGGCCTCCGTGTTCGCGAAACAAAGG AAGTTTATGAGGGAGAGGTGACAGAGCTTACCCCCGAGGAGGCTGAGAACCCACTGGGCGGATACGGGCGCACAA TTAGCCACCTGATCATCGGATTGAAGTCCGCTAAGGGCTCCAAGAAGCTGCGCCTGGACCCTAGCATCTACGAAG CCATCCAGAAAGAGCGTGTCACAGTCGGAGATGTCATCTACATTGAAGCCAACACCGGCTCATGCAAGCGAGTCG GGCGATCCGATGCCTATGCTACCGAATTCGATCTTGAGGCTGAGGAGTATGTGCCTGTCCCCAAGGGTGAGGTTC ACAAGAAGAAGGAGATTGTTCAGGATGTGACCCTTCACGACCTGGATATGGCCAACGCCCGACCCCAGGGCGGAC AAGACGTGATGAGTATGATGGGCCAGCTGATGAAGCCCAAGAAGACGGAAATCACGGACAAGTTGCGCCAGGAAA TCAACAAGGTTGTCAACAGGTACATTGATCAGGGTGTCGCAGAGTTGGTTCCCGGTGTTCTCTTCATCGATGAGG TACGTGGAGAAAGTTTATGCTGTCAATTATTGGATCATGTCTCTGACTTCGTTTCTTCGTCTAGGTGCACATGCT CGACATTGAGTGCTTCACATATCTGAACCGCGCCCTCGAATCGACCATCTCCCCGATTGTCATCCTCGCCTCCAA CCGTGGCCACGCCGTTATTCGCGGTACTGAAATCAGTGCCGCACACGGTATCCCACCTGATCTGCTTGCCCGCCT TCTTATCATCCCCACCAACCCCTACGCCCCCGAGGAGATCAAGACTATCATCCGGCTGCGCGCCAAGATTGAAGG CCTCAATATCACAGAGCCTGCCTTGAACAAGGTCGCTGACCATGGAAGCAAGGTCAGCTTGCGGTATGCCCTGCA GCTGTTGACCCCCGCAAGCATTCTCTCGCGTGTCAATGGCCGCCCCGGCGCAATTGAGGAGGCTGATATTGCGGA GTGCGAGGATCTCTTCCTGGATGCCAAGCGTAGCGCAATCATTGTTGATCAAGATAGCAAGAATTTCCTGTTATA A

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences