Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3783.t1
Gene name
Locationscaffold_06:757842..758466
Strand-
Gene length (bp)624
Transcript length (bp)624
Coding sequence length (bp)624
Protein length (aa) 208

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00830 Ribosomal_L28 Ribosomal L28 family 2.3E-18 57 114

GO

GO Term Description Terminal node
GO:0003735 structural constituent of ribosome Yes
GO:0005198 structural molecule activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3783.t1
MAAPFSLASAFRSLSIATPKRSFSTTPATQSVPKLPETAPVYPYGESKWYKQADSGLYGGASIRFGNKISKGRNA
GKTRRTWKPNVRRKKIESEALGESVFIKVTRRALRSIYKAKGLDNYLLSDRPTRLKELGPFGWNLRHQIMQTPAI
KERFDKQRKAFGIPEPPTLSKWMRDHRLEIRNKIENLDIDAMTKPRVSPRSSQSYAR*
Coding >Pro_DTO377G3_2|g3783.t1
ATGGCCGCCCCCTTCTCTTTGGCCTCGGCCTTCCGCAGTCTTTCCATCGCCACACCGAAGCGATCCTTCTCAACG
ACGCCGGCAACGCAATCAGTTCCGAAACTACCGGAAACCGCCCCAGTCTACCCCTACGGAGAATCCAAGTGGTAC
AAGCAGGCTGACTCCGGTCTCTATGGAGGCGCTTCGATCCGATTCGGCAACAAGATCTCTAAGGGACGCAATGCA
GGCAAGACACGACGAACCTGGAAGCCTAACGTCCGCCGAAAGAAGATCGAGAGCGAGGCTCTGGGCGAGTCAGTG
TTTATCAAGGTCACTCGTCGCGCCTTGCGATCAATATACAAGGCCAAGGGCCTAGACAACTATTTGCTGTCTGAT
CGGCCAACACGCCTCAAGGAGCTCGGTCCTTTCGGATGGAACCTTCGACACCAGATTATGCAAACACCGGCGATC
AAGGAGAGATTTGATAAGCAGCGTAAGGCCTTCGGTATTCCTGAGCCCCCGACATTGAGCAAATGGATGAGGGAC
CACAGGCTGGAGATCAGGAACAAAATCGAAAACCTGGACATTGACGCCATGACCAAGCCTCGCGTCTCTCCGCGA
AGCAGCCAGTCGTATGCTCGCTAG
Transcript >Pro_DTO377G3_2|g3783.t1
ATGGCCGCCCCCTTCTCTTTGGCCTCGGCCTTCCGCAGTCTTTCCATCGCCACACCGAAGCGATCCTTCTCAACG
ACGCCGGCAACGCAATCAGTTCCGAAACTACCGGAAACCGCCCCAGTCTACCCCTACGGAGAATCCAAGTGGTAC
AAGCAGGCTGACTCCGGTCTCTATGGAGGCGCTTCGATCCGATTCGGCAACAAGATCTCTAAGGGACGCAATGCA
GGCAAGACACGACGAACCTGGAAGCCTAACGTCCGCCGAAAGAAGATCGAGAGCGAGGCTCTGGGCGAGTCAGTG
TTTATCAAGGTCACTCGTCGCGCCTTGCGATCAATATACAAGGCCAAGGGCCTAGACAACTATTTGCTGTCTGAT
CGGCCAACACGCCTCAAGGAGCTCGGTCCTTTCGGATGGAACCTTCGACACCAGATTATGCAAACACCGGCGATC
AAGGAGAGATTTGATAAGCAGCGTAAGGCCTTCGGTATTCCTGAGCCCCCGACATTGAGCAAATGGATGAGGGAC
CACAGGCTGGAGATCAGGAACAAAATCGAAAACCTGGACATTGACGCCATGACCAAGCCTCGCGTCTCTCCGCGA
AGCAGCCAGTCGTATGCTCGCTAG
Gene >Pro_DTO377G3_2|g3783.t1
ATGGCCGCCCCCTTCTCTTTGGCCTCGGCCTTCCGCAGTCTTTCCATCGCCACACCGAAGCGATCCTTCTCAACG
ACGCCGGCAACGCAATCAGTTCCGAAACTACCGGAAACCGCCCCAGTCTACCCCTACGGAGAATCCAAGTGGTAC
AAGCAGGCTGACTCCGGTCTCTATGGAGGCGCTTCGATCCGATTCGGCAACAAGATCTCTAAGGGACGCAATGCA
GGCAAGACACGACGAACCTGGAAGCCTAACGTCCGCCGAAAGAAGATCGAGAGCGAGGCTCTGGGCGAGTCAGTG
TTTATCAAGGTCACTCGTCGCGCCTTGCGATCAATATACAAGGCCAAGGGCCTAGACAACTATTTGCTGTCTGAT
CGGCCAACACGCCTCAAGGAGCTCGGTCCTTTCGGATGGAACCTTCGACACCAGATTATGCAAACACCGGCGATC
AAGGAGAGATTTGATAAGCAGCGTAAGGCCTTCGGTATTCCTGAGCCCCCGACATTGAGCAAATGGATGAGGGAC
CACAGGCTGGAGATCAGGAACAAAATCGAAAACCTGGACATTGACGCCATGACCAAGCCTCGCGTCTCTCCGCGA
AGCAGCCAGTCGTATGCTCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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