Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3774.t1
Gene name
Locationscaffold_06:721908..724040
Strand-
Gene length (bp)2132
Transcript length (bp)1959
Coding sequence length (bp)1959
Protein length (aa) 653

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00505 HMG_box HMG (high mobility group) box 3.0E-23 100 168
PF09011 HMG_box_2 HMG-box domain 1.6E-09 102 167

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
HMG

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3774.t1
MNEELPKSVMAMRHPDGAVRYADPRSTGIHQTHQHISKEAHRMSSNGPGKPVGPMISTKELPLRERSDRSSSSSA
SSTSPIKSHKESALQFCLCQPDPKIPRPRNAFILYRQHYQAMVVAHNPGLANPEISKIIGEQWRSLSEEDKSKWK
ALAEEEKARHQQQYPDYRYQPRRYGRDGSARSSATGIGHNPSGSSHCNRCGGRLMNAPASPMTPFTPSSGPGFRP
SNFSPHPSSMPPRSVQGHEKDPNPPKSAKMDHDPRSRQRHWEEPGGRSPDNKRRRVSQASFKPTLHPYRDHSPGN
GVPESPHPMTPWSARPEMPPRHLPMLQPQRPYQSVQGQSHPDPSLKLPPLQTTTPVMTPMTPYPQEGSSVEATVM
TIPFLNKIKVLAKISPPLLPSFRDGIPPARGPVIAVDGQDPDLVQAAVEYLNNLLKKETKYHVRVFDGPEIKAPR
PTSAEAGQMGDATVDYLNTISAWHRISDEVVNFVKPTSRAGSVDARSITTDEETPVPNVSPRTLIPKTANMHIHS
PVLSSENGSEVSALTSASHYSVPIALVPRYQLTTADAFACSTPIGDSYAPLDHWQWMASLWRACVGPDITVYIRE
CSKEELDRMGGNPVEVRLQDVRTVVLRKVAGRDLEEKALKRMGFEIEDFLTQ*
Coding >Pro_DTO377G3_2|g3774.t1
ATGAACGAAGAATTGCCCAAGTCGGTCATGGCCATGAGACACCCCGACGGCGCAGTCAGATACGCCGATCCGAGG
TCAACGGGGATACATCAGACACATCAACATATCTCCAAAGAAGCACACCGGATGTCCTCCAATGGCCCCGGCAAG
CCTGTCGGACCCATGATCTCCACCAAGGAATTGCCATTGCGAGAGAGATCGGATCGATCCTCCTCCTCGTCAGCT
AGCAGTACCAGTCCTATCAAATCACACAAAGAGAGTGCCCTGCAGTTCTGCCTCTGCCAGCCAGATCCGAAGATT
CCCCGGCCTCGTAATGCGTTTATTCTGTATCGCCAGCATTATCAGGCCATGGTTGTTGCTCATAACCCGGGCTTG
GCCAATCCTGAGATCTCCAAGATTATTGGAGAACAGTGGCGTTCTCTTTCGGAGGAGGACAAGAGTAAATGGAAG
GCACTTGCAGAGGAGGAAAAAGCTCGCCATCAGCAGCAATACCCTGACTACCGCTACCAGCCTCGGCGGTATGGT
CGGGATGGAAGCGCCCGAAGCTCGGCCACAGGAATTGGGCACAACCCATCTGGCTCATCACATTGTAACAGATGT
GGTGGCCGATTGATGAATGCACCCGCTTCCCCCATGACCCCGTTCACACCCAGCAGTGGGCCTGGGTTTCGACCA
TCAAACTTCTCACCACACCCAAGTAGCATGCCGCCAAGAAGCGTCCAAGGCCATGAGAAAGACCCTAATCCACCA
AAGTCGGCCAAGATGGACCACGATCCCCGTTCTCGCCAACGACACTGGGAGGAACCCGGTGGTCGATCTCCCGAC
AACAAACGCCGCCGGGTATCCCAGGCCTCATTCAAGCCAACTTTACATCCCTACCGGGACCACAGTCCTGGCAAC
GGCGTTCCAGAGTCACCGCATCCGATGACCCCTTGGAGTGCTCGCCCGGAGATGCCGCCACGCCATCTCCCCATG
CTTCAACCGCAACGGCCATATCAAAGCGTCCAGGGACAGTCACACCCCGACCCCAGTCTGAAGCTACCGCCACTC
CAGACCACAACACCGGTGATGACTCCCATGACACCCTATCCACAGGAAGGCTCCAGTGTCGAAGCAACAGTCATG
ACAATCCCCTTCCTCAACAAGATCAAAGTCCTCGCCAAGATCTCCCCACCCCTCCTCCCCTCATTCCGAGACGGA
ATCCCACCAGCCCGCGGCCCCGTCATCGCCGTCGACGGCCAAGACCCGGACCTCGTCCAAGCAGCCGTCGAATAC
CTCAACAACCTTCTAAAAAAGGAAACAAAGTACCACGTCCGGGTATTCGACGGTCCAGAAATCAAAGCCCCCCGA
CCAACCTCCGCAGAAGCCGGCCAGATGGGCGACGCGACAGTCGACTACCTCAACACCATCTCCGCCTGGCACCGG
ATCTCCGACGAAGTCGTCAACTTCGTGAAACCCACCTCGCGAGCCGGCTCCGTCGACGCCCGCTCCATAACCACA
GACGAGGAAACCCCCGTCCCCAACGTCTCCCCCCGCACCCTCATCCCCAAAACCGCAAACATGCACATCCACTCC
CCAGTCCTGTCCAGCGAGAACGGCTCCGAGGTCAGCGCCCTCACATCAGCCAGCCACTACAGCGTACCGATTGCG
CTCGTCCCGCGCTACCAGCTCACGACGGCGGATGCATTCGCCTGCTCCACGCCCATCGGCGACTCCTACGCGCCG
CTCGACCACTGGCAGTGGATGGCGTCGCTGTGGCGCGCGTGTGTGGGCCCTGATATCACGGTTTACATTCGGGAG
TGCAGCAAGGAGGAGCTTGATCGCATGGGTGGGAATCCGGTTGAGGTGCGATTGCAGGATGTGCGCACGGTGGTG
CTACGGAAGGTTGCTGGGAGGGATTTGGAGGAGAAGGCGTTGAAGCGGATGGGTTTTGAGATTGAGGATTTTTTG
ACGCAGTAA
Transcript >Pro_DTO377G3_2|g3774.t1
ATGAACGAAGAATTGCCCAAGTCGGTCATGGCCATGAGACACCCCGACGGCGCAGTCAGATACGCCGATCCGAGG
TCAACGGGGATACATCAGACACATCAACATATCTCCAAAGAAGCACACCGGATGTCCTCCAATGGCCCCGGCAAG
CCTGTCGGACCCATGATCTCCACCAAGGAATTGCCATTGCGAGAGAGATCGGATCGATCCTCCTCCTCGTCAGCT
AGCAGTACCAGTCCTATCAAATCACACAAAGAGAGTGCCCTGCAGTTCTGCCTCTGCCAGCCAGATCCGAAGATT
CCCCGGCCTCGTAATGCGTTTATTCTGTATCGCCAGCATTATCAGGCCATGGTTGTTGCTCATAACCCGGGCTTG
GCCAATCCTGAGATCTCCAAGATTATTGGAGAACAGTGGCGTTCTCTTTCGGAGGAGGACAAGAGTAAATGGAAG
GCACTTGCAGAGGAGGAAAAAGCTCGCCATCAGCAGCAATACCCTGACTACCGCTACCAGCCTCGGCGGTATGGT
CGGGATGGAAGCGCCCGAAGCTCGGCCACAGGAATTGGGCACAACCCATCTGGCTCATCACATTGTAACAGATGT
GGTGGCCGATTGATGAATGCACCCGCTTCCCCCATGACCCCGTTCACACCCAGCAGTGGGCCTGGGTTTCGACCA
TCAAACTTCTCACCACACCCAAGTAGCATGCCGCCAAGAAGCGTCCAAGGCCATGAGAAAGACCCTAATCCACCA
AAGTCGGCCAAGATGGACCACGATCCCCGTTCTCGCCAACGACACTGGGAGGAACCCGGTGGTCGATCTCCCGAC
AACAAACGCCGCCGGGTATCCCAGGCCTCATTCAAGCCAACTTTACATCCCTACCGGGACCACAGTCCTGGCAAC
GGCGTTCCAGAGTCACCGCATCCGATGACCCCTTGGAGTGCTCGCCCGGAGATGCCGCCACGCCATCTCCCCATG
CTTCAACCGCAACGGCCATATCAAAGCGTCCAGGGACAGTCACACCCCGACCCCAGTCTGAAGCTACCGCCACTC
CAGACCACAACACCGGTGATGACTCCCATGACACCCTATCCACAGGAAGGCTCCAGTGTCGAAGCAACAGTCATG
ACAATCCCCTTCCTCAACAAGATCAAAGTCCTCGCCAAGATCTCCCCACCCCTCCTCCCCTCATTCCGAGACGGA
ATCCCACCAGCCCGCGGCCCCGTCATCGCCGTCGACGGCCAAGACCCGGACCTCGTCCAAGCAGCCGTCGAATAC
CTCAACAACCTTCTAAAAAAGGAAACAAAGTACCACGTCCGGGTATTCGACGGTCCAGAAATCAAAGCCCCCCGA
CCAACCTCCGCAGAAGCCGGCCAGATGGGCGACGCGACAGTCGACTACCTCAACACCATCTCCGCCTGGCACCGG
ATCTCCGACGAAGTCGTCAACTTCGTGAAACCCACCTCGCGAGCCGGCTCCGTCGACGCCCGCTCCATAACCACA
GACGAGGAAACCCCCGTCCCCAACGTCTCCCCCCGCACCCTCATCCCCAAAACCGCAAACATGCACATCCACTCC
CCAGTCCTGTCCAGCGAGAACGGCTCCGAGGTCAGCGCCCTCACATCAGCCAGCCACTACAGCGTACCGATTGCG
CTCGTCCCGCGCTACCAGCTCACGACGGCGGATGCATTCGCCTGCTCCACGCCCATCGGCGACTCCTACGCGCCG
CTCGACCACTGGCAGTGGATGGCGTCGCTGTGGCGCGCGTGTGTGGGCCCTGATATCACGGTTTACATTCGGGAG
TGCAGCAAGGAGGAGCTTGATCGCATGGGTGGGAATCCGGTTGAGGTGCGATTGCAGGATGTGCGCACGGTGGTG
CTACGGAAGGTTGCTGGGAGGGATTTGGAGGAGAAGGCGTTGAAGCGGATGGGTTTTGAGATTGAGGATTTTTTG
ACGCAGTAA
Gene >Pro_DTO377G3_2|g3774.t1
ATGAACGAAGAATTGCCCAAGTCGGTCATGGCCATGAGACACCCCGACGGCGCAGTCAGATACGCCGATCCGAGG
TCAACGGGGATACATCAGACACATCAACATATCTCCAAAGAAGCACACCGGATGTCCTCCAATGGCCCCGGCAAG
CCTGTCGGACCCATGATCTCCACCAAGGAATTGCCATTGCGAGAGAGATCGGATCGATCCTCCTCCTCGTCAGCT
AGCAGTACCAGTCCTATCAAATCACACAAAGAGAGTGCCCTGCAGTTCTGCCTCTGCCAGCCAGATCCGAAGATT
CCCCGGCCTCGTAATGGTGAGTCGATACTGTCCGCACCGTCATTACAGTTTGGCAAGTGCTTTTTCGATTGTTTC
TTTTTTGGTCGTCGTCAGCCAGATCGGATCTTTCGAATGCATGGACATGGCTAATATTGGTCTAGCGTTTATTCT
GTATCGCCAGCATTATCAGGCCATGGTTGTTGCTCATAACCCGGGCTTGGCCAATCCTGAGATCTCCAAGATTAT
TGGAGAACAGTGGCGTTCTCTTTCGGAGGAGGACAAGAGTAAATGGAAGGCACTTGCAGAGGTATGAAAGCATTC
CCAGAGATATGAATTCAAACACTGACAATTACAAGGAGGAAAAAGCTCGCCATCAGCAGCAATACCCTGACTACC
GCTACCAGCCTCGGCGGTATGGTCGGGATGGAAGCGCCCGAAGCTCGGCCACAGGAATTGGGCACAACCCATCTG
GCTCATCACATTGTAACAGATGTGGTGGCCGATTGATGAATGCACCCGCTTCCCCCATGACCCCGTTCACACCCA
GCAGTGGGCCTGGGTTTCGACCATCAAACTTCTCACCACACCCAAGTAGCATGCCGCCAAGAAGCGTCCAAGGCC
ATGAGAAAGACCCTAATCCACCAAAGTCGGCCAAGATGGACCACGATCCCCGTTCTCGCCAACGACACTGGGAGG
AACCCGGTGGTCGATCTCCCGACAACAAACGCCGCCGGGTATCCCAGGCCTCATTCAAGCCAACTTTACATCCCT
ACCGGGACCACAGTCCTGGCAACGGCGTTCCAGAGTCACCGCATCCGATGACCCCTTGGAGTGCTCGCCCGGAGA
TGCCGCCACGCCATCTCCCCATGCTTCAACCGCAACGGCCATATCAAAGCGTCCAGGGACAGTCACACCCCGACC
CCAGTCTGAAGCTACCGCCACTCCAGACCACAACACCGGTGATGACTCCCATGACACCCTATCCACAGGAAGGCT
CCAGTGTCGAAGCAACAGTCATGACAATCCCCTTCCTCAACAAGATCAAAGTCCTCGCCAAGATCTCCCCACCCC
TCCTCCCCTCATTCCGAGACGGAATCCCACCAGCCCGCGGCCCCGTCATCGCCGTCGACGGCCAAGACCCGGACC
TCGTCCAAGCAGCCGTCGAATACCTCAACAACCTTCTAAAAAAGGAAACAAAGTACCACGTCCGGGTATTCGACG
GTCCAGAAATCAAAGCCCCCCGACCAACCTCCGCAGAAGCCGGCCAGATGGGCGACGCGACAGTCGACTACCTCA
ACACCATCTCCGCCTGGCACCGGATCTCCGACGAAGTCGTCAACTTCGTGAAACCCACCTCGCGAGCCGGCTCCG
TCGACGCCCGCTCCATAACCACAGACGAGGAAACCCCCGTCCCCAACGTCTCCCCCCGCACCCTCATCCCCAAAA
CCGCAAACATGCACATCCACTCCCCAGTCCTGTCCAGCGAGAACGGCTCCGAGGTCAGCGCCCTCACATCAGCCA
GCCACTACAGCGTACCGATTGCGCTCGTCCCGCGCTACCAGCTCACGACGGCGGATGCATTCGCCTGCTCCACGC
CCATCGGCGACTCCTACGCGCCGCTCGACCACTGGCAGTGGATGGCGTCGCTGTGGCGCGCGTGTGTGGGCCCTG
ATATCACGGTTTACATTCGGGAGTGCAGCAAGGAGGAGCTTGATCGCATGGGTGGGAATCCGGTTGAGGTGCGAT
TGCAGGATGTGCGCACGGTGGTGCTACGGAAGGTTGCTGGGAGGGATTTGGAGGAGAAGGCGTTGAAGCGGATGG
GTTTTGAGATTGAGGATTTTTTGACGCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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