Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3744.t1
Gene name
Locationscaffold_06:622528..623609
Strand-
Gene length (bp)1081
Transcript length (bp)963
Coding sequence length (bp)963
Protein length (aa) 321

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08690 GET2 GET complex subunit GET2 2.3E-10 11 271

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 223 245 22
2 260 279 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3744.t1
MADESPAQRSARVRRERREAKIKEGGSARLDKITSLSGRTPQADRDEASSPQSKHAIPESPSPGPQTPQLGLSPS
PQPDLQSQEAMRAQQQAFFSMLRQSAPEPNQGMHPDPQAPNSLQAQQEAFRTMLRQTTQDQGPDQLPDGEDPTIK
LLNSLIGAIPGGDPNTPGAPPTGAGAGNPLTPGFSPAGIATMLGVPPFLANMLNGAPPPTEAEQKRARIWKTLHT
VFAVTVAVYLLFIIGSSVALFGSPPPKPATVQNPFAIFVTGELMLTGGKVLLGGKSGGIGMAVQLCKDVVRDGSL
LLFILGMGTWYNREWQTTVY*
Coding >Pro_DTO377G3_2|g3744.t1
ATGGCAGACGAATCACCAGCACAGCGATCCGCACGAGTGCGCCGAGAGCGCCGGGAGGCAAAGATCAAGGAAGGA
GGATCAGCACGTCTGGACAAAATCACCAGTCTGAGTGGACGCACGCCACAAGCTGACCGCGACGAAGCCTCCTCC
CCCCAGTCCAAGCACGCAATCCCTGAATCTCCCTCCCCAGGACCTCAAACCCCCCAGCTCGGACTCTCACCCTCG
CCCCAACCAGACCTGCAGTCCCAAGAAGCGATGCGCGCCCAGCAGCAAGCGTTCTTCTCGATGCTCCGACAATCC
GCACCGGAACCCAACCAGGGCATGCATCCCGACCCACAAGCGCCAAACAGCCTCCAGGCCCAACAAGAAGCCTTC
CGCACGATGCTGAGACAAACCACACAAGACCAAGGACCGGACCAACTACCCGACGGCGAAGACCCCACCATCAAG
CTCCTGAACTCCCTCATCGGCGCTATACCCGGCGGTGACCCGAATACCCCAGGAGCACCCCCAACAGGCGCAGGC
GCAGGAAACCCACTTACACCCGGATTCTCGCCCGCCGGCATCGCAACCATGCTCGGTGTGCCGCCTTTCCTTGCC
AATATGTTGAATGGAGCGCCGCCGCCTACGGAGGCGGAGCAGAAGCGCGCTCGGATCTGGAAGACGCTGCATACC
GTTTTTGCTGTGACGGTTGCTGTGTACCTGCTTTTCATTATTGGGTCTTCGGTTGCGTTGTTCGGTAGTCCGCCG
CCGAAGCCTGCGACCGTGCAGAATCCCTTTGCTATCTTTGTGACGGGGGAGTTGATGTTGACTGGGGGCAAGGTG
TTGCTTGGTGGGAAGTCTGGTGGTATCGGGATGGCGGTGCAACTTTGCAAGGATGTCGTGAGGGATGGTAGCCTC
CTGCTGTTTATCCTGGGCATGGGGACTTGGTACAATCGCGAATGGCAGACTACGGTGTACTAG
Transcript >Pro_DTO377G3_2|g3744.t1
ATGGCAGACGAATCACCAGCACAGCGATCCGCACGAGTGCGCCGAGAGCGCCGGGAGGCAAAGATCAAGGAAGGA
GGATCAGCACGTCTGGACAAAATCACCAGTCTGAGTGGACGCACGCCACAAGCTGACCGCGACGAAGCCTCCTCC
CCCCAGTCCAAGCACGCAATCCCTGAATCTCCCTCCCCAGGACCTCAAACCCCCCAGCTCGGACTCTCACCCTCG
CCCCAACCAGACCTGCAGTCCCAAGAAGCGATGCGCGCCCAGCAGCAAGCGTTCTTCTCGATGCTCCGACAATCC
GCACCGGAACCCAACCAGGGCATGCATCCCGACCCACAAGCGCCAAACAGCCTCCAGGCCCAACAAGAAGCCTTC
CGCACGATGCTGAGACAAACCACACAAGACCAAGGACCGGACCAACTACCCGACGGCGAAGACCCCACCATCAAG
CTCCTGAACTCCCTCATCGGCGCTATACCCGGCGGTGACCCGAATACCCCAGGAGCACCCCCAACAGGCGCAGGC
GCAGGAAACCCACTTACACCCGGATTCTCGCCCGCCGGCATCGCAACCATGCTCGGTGTGCCGCCTTTCCTTGCC
AATATGTTGAATGGAGCGCCGCCGCCTACGGAGGCGGAGCAGAAGCGCGCTCGGATCTGGAAGACGCTGCATACC
GTTTTTGCTGTGACGGTTGCTGTGTACCTGCTTTTCATTATTGGGTCTTCGGTTGCGTTGTTCGGTAGTCCGCCG
CCGAAGCCTGCGACCGTGCAGAATCCCTTTGCTATCTTTGTGACGGGGGAGTTGATGTTGACTGGGGGCAAGGTG
TTGCTTGGTGGGAAGTCTGGTGGTATCGGGATGGCGGTGCAACTTTGCAAGGATGTCGTGAGGGATGGTAGCCTC
CTGCTGTTTATCCTGGGCATGGGGACTTGGTACAATCGCGAATGGCAGACTACGGTGTACTAG
Gene >Pro_DTO377G3_2|g3744.t1
ATGGCAGACGAATCACCAGCACAGCGATCCGCACGAGTGCGCCGAGAGCGCCGGGAGGCAAAGATCAAGGAAGGA
GGATCAGCACGTCTGGACAAAATCACCAGTCTGAGTGGACGCACGCCACAAGCTGGTAAGAAATGAAATTTCCAT
CCCCGGCTCTAGCCAAAGAGCTCCCGATAGCAAAGCAGACATACAATCCCTTCAGCCTCGCCAGTACAAACAATG
CTAACTGAAATCAACTACAACAGACCGCGACGAAGCCTCCTCCCCCCAGTCCAAGCACGCAATCCCTGAATCTCC
CTCCCCAGGACCTCAAACCCCCCAGCTCGGACTCTCACCCTCGCCCCAACCAGACCTGCAGTCCCAAGAAGCGAT
GCGCGCCCAGCAGCAAGCGTTCTTCTCGATGCTCCGACAATCCGCACCGGAACCCAACCAGGGCATGCATCCCGA
CCCACAAGCGCCAAACAGCCTCCAGGCCCAACAAGAAGCCTTCCGCACGATGCTGAGACAAACCACACAAGACCA
AGGACCGGACCAACTACCCGACGGCGAAGACCCCACCATCAAGCTCCTGAACTCCCTCATCGGCGCTATACCCGG
CGGTGACCCGAATACCCCAGGAGCACCCCCAACAGGCGCAGGCGCAGGAAACCCACTTACACCCGGATTCTCGCC
CGCCGGCATCGCAACCATGCTCGGTGTGCCGCCTTTCCTTGCCAATATGTTGAATGGAGCGCCGCCGCCTACGGA
GGCGGAGCAGAAGCGCGCTCGGATCTGGAAGACGCTGCATACCGTTTTTGCTGTGACGGTTGCTGTGTACCTGCT
TTTCATTATTGGGTCTTCGGTTGCGTTGTTCGGTAGTCCGCCGCCGAAGCCTGCGACCGTGCAGAATCCCTTTGC
TATCTTTGTGACGGGGGAGTTGATGTTGACTGGGGGCAAGGTGTTGCTTGGTGGGAAGTCTGGTGGTATCGGGAT
GGCGGTGCAACTTTGCAAGGATGTCGTGAGGGATGGTAGCCTCCTGCTGTTTATCCTGGGCATGGGGACTTGGTA
CAATCGCGAATGGCAGACTACGGTGTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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