© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3742.t1 |
| Gene name | |
| Location | scaffold_06:617693..619121 |
| Strand | - |
| Gene length (bp) | 1428 |
| Transcript length (bp) | 1371 |
| Coding sequence length (bp) | 1371 |
| Protein length (aa) | 457 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 2.6E-39 | 51 | 435 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 58 | 80 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 127 | 149 | 22 |
| 4 | 159 | 181 | 22 |
| 5 | 188 | 210 | 22 |
| 6 | 230 | 252 | 22 |
| 7 | 265 | 287 | 22 |
| 8 | 307 | 327 | 20 |
| 9 | 348 | 370 | 22 |
| 10 | 380 | 402 | 22 |
| 11 | 414 | 436 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3742.t1 MEVNTAPPVYENDKIAERKDELTYEEEGPIKTGEVHDAFGNEEYADIKYKTLKWWQCGLLMICESVSLGVLSLPA AMATLGLVPGIILIIGLGLLATYTGYNIGLFRERYPHIQNLGDAGEILLGRFGRELFGTGQFLFCIFVMGSHILT FRVMLNTLTNHGTCSVVFSVVGMVISILLSMPRTMKGMTWISFLSFLSILSAVMITMISVGVEKHPGRVIHATVP NDLYTAFQAVSNIVFAYCAHVAFFGLIAEMETPQDFKKSLFMLQGFEICLYLTAAIVIYFYIGTDVHSPALTSAG PLMSKIAYGIAIPTIVGAGVVNGHIGLKYIYFRLCSKSGLMHQNNKRAVGLWIGLGIACWVVAWIISEAIPVFSD LNSLISALFASWFSYGLSGIYWLHLNYGQWFSSPRKIALTVLNIFIACIGLVLCVLGLYASGTAINKNSNSNSFT CADTDT* |
| Coding | >Pro_DTO377G3_2|g3742.t1 ATGGAGGTCAACACAGCACCACCCGTCTATGAGAATGACAAGATCGCAGAACGGAAAGATGAATTAACATACGAG GAGGAGGGCCCCATCAAGACTGGCGAAGTCCACGATGCCTTTGGCAACGAGGAGTACGCTGACATCAAGTATAAG ACCTTGAAGTGGTGGCAATGTGGCTTGCTCATGATCTGTGAGTCAGTCTCACTGGGTGTGTTGTCGCTGCCAGCA GCCATGGCTACCCTGGGTCTCGTCCCCGGTATCATTCTGATTATCGGCCTCGGACTTCTCGCAACATACACTGGC TACAATATTGGCCTCTTCCGTGAACGGTATCCTCATATCCAGAACCTGGGTGATGCGGGTGAGATTTTGCTAGGC CGCTTCGGCCGAGAGCTCTTTGGTACTGGCCAGTTCCTCTTCTGTATCTTCGTCATGGGCAGTCACATCCTTACC TTCCGTGTCATGCTGAACACCCTCACCAACCACGGCACCTGCTCCGTTGTGTTCAGTGTCGTCGGCATGGTTATC TCAATTCTCCTGTCCATGCCCCGTACGATGAAGGGTATGACCTGGATATCGTTCCTATCATTCCTCAGCATCTTG AGCGCCGTGATGATCACTATGATTTCCGTGGGTGTCGAGAAGCACCCCGGTCGTGTCATCCACGCCACAGTCCCC AACGACCTGTACACTGCTTTCCAGGCCGTTTCCAACATCGTCTTCGCTTACTGCGCCCACGTTGCTTTCTTCGGT TTGATCGCCGAAATGGAGACGCCCCAGGATTTCAAGAAGTCCTTGTTCATGCTTCAGGGCTTTGAGATCTGTCTC TACCTGACCGCTGCTATTGTGATCTATTTCTACATTGGCACAGACGTGCATTCCCCTGCCCTCACTTCCGCAGGA CCCCTGATGAGCAAGATTGCCTACGGCATTGCTATCCCCACCATTGTCGGCGCCGGTGTCGTCAACGGCCACATC GGCTTGAAGTACATCTACTTCCGCCTCTGCTCCAAGTCCGGTCTGATGCACCAGAACAACAAGCGTGCCGTCGGT CTCTGGATCGGTCTTGGTATTGCTTGCTGGGTCGTTGCGTGGATCATCTCCGAAGCCATTCCTGTCTTCAGCGAC CTGAACAGTTTGATCAGTGCTCTGTTCGCTTCATGGTTCAGTTACGGTCTGTCCGGTATTTACTGGCTTCACCTC AACTATGGTCAATGGTTCTCCTCTCCCCGCAAGATCGCCCTTACCGTCCTCAACATCTTCATTGCCTGCATTGGT TTGGTGCTGTGCGTTCTTGGCCTGTATGCTTCTGGTACGGCTATCAACAAGAACTCCAACAGCAACAGCTTCACC TGTGCCGACACGGATACTTAG |
| Transcript | >Pro_DTO377G3_2|g3742.t1 ATGGAGGTCAACACAGCACCACCCGTCTATGAGAATGACAAGATCGCAGAACGGAAAGATGAATTAACATACGAG GAGGAGGGCCCCATCAAGACTGGCGAAGTCCACGATGCCTTTGGCAACGAGGAGTACGCTGACATCAAGTATAAG ACCTTGAAGTGGTGGCAATGTGGCTTGCTCATGATCTGTGAGTCAGTCTCACTGGGTGTGTTGTCGCTGCCAGCA GCCATGGCTACCCTGGGTCTCGTCCCCGGTATCATTCTGATTATCGGCCTCGGACTTCTCGCAACATACACTGGC TACAATATTGGCCTCTTCCGTGAACGGTATCCTCATATCCAGAACCTGGGTGATGCGGGTGAGATTTTGCTAGGC CGCTTCGGCCGAGAGCTCTTTGGTACTGGCCAGTTCCTCTTCTGTATCTTCGTCATGGGCAGTCACATCCTTACC TTCCGTGTCATGCTGAACACCCTCACCAACCACGGCACCTGCTCCGTTGTGTTCAGTGTCGTCGGCATGGTTATC TCAATTCTCCTGTCCATGCCCCGTACGATGAAGGGTATGACCTGGATATCGTTCCTATCATTCCTCAGCATCTTG AGCGCCGTGATGATCACTATGATTTCCGTGGGTGTCGAGAAGCACCCCGGTCGTGTCATCCACGCCACAGTCCCC AACGACCTGTACACTGCTTTCCAGGCCGTTTCCAACATCGTCTTCGCTTACTGCGCCCACGTTGCTTTCTTCGGT TTGATCGCCGAAATGGAGACGCCCCAGGATTTCAAGAAGTCCTTGTTCATGCTTCAGGGCTTTGAGATCTGTCTC TACCTGACCGCTGCTATTGTGATCTATTTCTACATTGGCACAGACGTGCATTCCCCTGCCCTCACTTCCGCAGGA CCCCTGATGAGCAAGATTGCCTACGGCATTGCTATCCCCACCATTGTCGGCGCCGGTGTCGTCAACGGCCACATC GGCTTGAAGTACATCTACTTCCGCCTCTGCTCCAAGTCCGGTCTGATGCACCAGAACAACAAGCGTGCCGTCGGT CTCTGGATCGGTCTTGGTATTGCTTGCTGGGTCGTTGCGTGGATCATCTCCGAAGCCATTCCTGTCTTCAGCGAC CTGAACAGTTTGATCAGTGCTCTGTTCGCTTCATGGTTCAGTTACGGTCTGTCCGGTATTTACTGGCTTCACCTC AACTATGGTCAATGGTTCTCCTCTCCCCGCAAGATCGCCCTTACCGTCCTCAACATCTTCATTGCCTGCATTGGT TTGGTGCTGTGCGTTCTTGGCCTGTATGCTTCTGGTACGGCTATCAACAAGAACTCCAACAGCAACAGCTTCACC TGTGCCGACACGGATACTTAG |
| Gene | >Pro_DTO377G3_2|g3742.t1 ATGGAGGTCAACACAGCACCACCCGTCTATGAGAATGACAAGATCGCAGAACGGAAAGATGAATTAACATACGAG GAGGAGGGCCCCATCAAGACTGGCGAAGTCCACGATGCCTTTGGCAACGAGGAGTACGCTGACATCAAGTATAAG ACCTTGAAGTGGTGGTATGTACTATCGTTGGGAAAAGAGCCTCTCGATTGACCGTGCTAACACGTCTTCAGGCAA TGTGGCTTGCTCATGATCTGTGAGTCAGTCTCACTGGGTGTGTTGTCGCTGCCAGCAGCCATGGCTACCCTGGGT CTCGTCCCCGGTATCATTCTGATTATCGGCCTCGGACTTCTCGCAACATACACTGGCTACAATATTGGCCTCTTC CGTGAACGGTATCCTCATATCCAGAACCTGGGTGATGCGGGTGAGATTTTGCTAGGCCGCTTCGGCCGAGAGCTC TTTGGTACTGGCCAGTTCCTCTTCTGTATCTTCGTCATGGGCAGTCACATCCTTACCTTCCGTGTCATGCTGAAC ACCCTCACCAACCACGGCACCTGCTCCGTTGTGTTCAGTGTCGTCGGCATGGTTATCTCAATTCTCCTGTCCATG CCCCGTACGATGAAGGGTATGACCTGGATATCGTTCCTATCATTCCTCAGCATCTTGAGCGCCGTGATGATCACT ATGATTTCCGTGGGTGTCGAGAAGCACCCCGGTCGTGTCATCCACGCCACAGTCCCCAACGACCTGTACACTGCT TTCCAGGCCGTTTCCAACATCGTCTTCGCTTACTGCGCCCACGTTGCTTTCTTCGGTTTGATCGCCGAAATGGAG ACGCCCCAGGATTTCAAGAAGTCCTTGTTCATGCTTCAGGGCTTTGAGATCTGTCTCTACCTGACCGCTGCTATT GTGATCTATTTCTACATTGGCACAGACGTGCATTCCCCTGCCCTCACTTCCGCAGGACCCCTGATGAGCAAGATT GCCTACGGCATTGCTATCCCCACCATTGTCGGCGCCGGTGTCGTCAACGGCCACATCGGCTTGAAGTACATCTAC TTCCGCCTCTGCTCCAAGTCCGGTCTGATGCACCAGAACAACAAGCGTGCCGTCGGTCTCTGGATCGGTCTTGGT ATTGCTTGCTGGGTCGTTGCGTGGATCATCTCCGAAGCCATTCCTGTCTTCAGCGACCTGAACAGTTTGATCAGT GCTCTGTTCGCTTCATGGTTCAGTTACGGTCTGTCCGGTATTTACTGGCTTCACCTCAACTATGGTCAATGGTTC TCCTCTCCCCGCAAGATCGCCCTTACCGTCCTCAACATCTTCATTGCCTGCATTGGTTTGGTGCTGTGCGTTCTT GGCCTGTATGCTTCTGGTACGGCTATCAACAAGAACTCCAACAGCAACAGCTTCACCTGTGCCGACACGGATACT TAG |