Protein ID | Pro_DTO377G3_2|g3738.t1 |
Gene name | |
Location | scaffold_06:607963..609717 |
Strand | - |
Gene length (bp) | 1754 |
Transcript length (bp) | 1368 |
Coding sequence length (bp) | 1368 |
Protein length (aa) | 456 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 1.8E-39 | 51 | 434 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 73 | 95 | 22 |
2 | 129 | 151 | 22 |
3 | 156 | 178 | 22 |
4 | 185 | 207 | 22 |
5 | 227 | 249 | 22 |
6 | 262 | 284 | 22 |
7 | 304 | 323 | 19 |
8 | 344 | 366 | 22 |
9 | 376 | 398 | 22 |
10 | 411 | 433 | 22 |
Orthofinder run ID | 2 |
Orthogroup | 394 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3738.t1 MSVPEAPHPIQDYEVYNDSTDMEKKAYPVDPPDDPFGNEESGEVKYRIMPWWQAGTLMVAENISLGILSLPSAVA TLGIIPAFVIIMFLSAISWYTGYTMGQFKQRYPQVHSMGDAGELLLGPIGREIFFVGQLLFIIFLMASHILTFSV LFNTITNHGTCTIVFGVVGLVVSCVAALPRTAEKVFWMSIISAISILVATIVTMISIGVQAPSDVQNDIVATPTF QEGFLAVTNIVFAFIAHVSFFGIMSEMQDPRDFPKALAMLQVIDTTMYVVTAMVIYCYAGPTVESPALSSAGPIM KKVAYGLAIPTVIVAGVVFGHVACKYIYVRIFRGDRSHHMHQKTFLATGTWVAIGLTTWTVAWVIAESIPVFNEL LSLISALFGSWFSYGLPAIFWFMMNKGKLFSSTRKIALTIINLAILGIACTICGLGLYVSGVAINESSSNASWTC ANNAT* |
Coding | >Pro_DTO377G3_2|g3738.t1 ATGAGTGTCCCCGAAGCACCCCATCCTATTCAGGACTACGAAGTGTACAATGACTCAACCGACATGGAGAAGAAG GCGTACCCGGTCGACCCCCCGGATGATCCCTTTGGGAACGAAGAATCTGGGGAAGTAAAGTATCGTATTATGCCA TGGTGGCAAGCTGGAACGTTGATGGTTGCTGAAAACATTTCGCTGGGTATTCTATCTCTTCCATCCGCAGTAGCA ACCCTCGGAATCATCCCAGCATTTGTCATTATTATGTTTTTGTCCGCCATCTCGTGGTACACTGGATACACCATG GGCCAGTTCAAGCAGCGTTATCCCCAGGTCCACAGCATGGGCGATGCGGGCGAGCTTCTTCTAGGCCCTATCGGA CGCGAGATTTTCTTTGTCGGCCAGCTGCTGTTCATCATCTTCTTGATGGCCAGCCACATTCTCACATTCTCGGTG TTGTTCAACACCATCACGAACCACGGTACCTGCACTATTGTATTTGGAGTTGTCGGCTTGGTCGTCAGCTGTGTT GCGGCCCTCCCGCGGACAGCAGAGAAGGTCTTTTGGATGTCCATCATCTCTGCCATCAGTATCCTGGTAGCCACT ATCGTCACGATGATTTCCATCGGTGTGCAGGCGCCCTCTGATGTCCAGAACGATATCGTCGCGACCCCGACCTTC CAGGAAGGCTTCTTGGCGGTTACCAACATCGTCTTTGCCTTCATTGCTCACGTGTCTTTCTTCGGTATCATGTCG GAGATGCAGGATCCCCGCGATTTCCCCAAGGCCCTCGCTATGCTCCAGGTTATCGATACTACTATGTATGTTGTG ACGGCTATGGTAATCTACTGCTATGCGGGCCCGACTGTCGAGTCTCCGGCTCTATCGTCGGCTGGACCTATAATG AAGAAAGTTGCCTATGGCCTGGCAATCCCAACGGTCATTGTTGCCGGTGTTGTTTTCGGCCATGTTGCATGCAAG TACATCTATGTTCGAATCTTCCGCGGCGATCGCTCCCACCACATGCACCAGAAGACTTTCTTGGCTACAGGTACA TGGGTCGCGATCGGCCTGACTACCTGGACTGTTGCGTGGGTCATTGCAGAGTCCATTCCAGTGTTCAACGAGTTG TTGAGTTTGATTAGTGCCCTATTCGGAAGCTGGTTTAGCTACGGCCTCCCTGCCATTTTCTGGTTCATGATGAAC AAGGGAAAGTTGTTCTCTTCAACTAGAAAGATAGCCCTGACTATTATCAACTTGGCCATTCTTGGAATTGCTTGT ACTATTTGTGGATTGGGACTCTATGTCTCGGGCGTGGCTATCAACGAGAGCTCGTCCAATGCCAGCTGGACCTGT GCCAACAATGCCACCTAG |
Transcript | >Pro_DTO377G3_2|g3738.t1 ATGAGTGTCCCCGAAGCACCCCATCCTATTCAGGACTACGAAGTGTACAATGACTCAACCGACATGGAGAAGAAG GCGTACCCGGTCGACCCCCCGGATGATCCCTTTGGGAACGAAGAATCTGGGGAAGTAAAGTATCGTATTATGCCA TGGTGGCAAGCTGGAACGTTGATGGTTGCTGAAAACATTTCGCTGGGTATTCTATCTCTTCCATCCGCAGTAGCA ACCCTCGGAATCATCCCAGCATTTGTCATTATTATGTTTTTGTCCGCCATCTCGTGGTACACTGGATACACCATG GGCCAGTTCAAGCAGCGTTATCCCCAGGTCCACAGCATGGGCGATGCGGGCGAGCTTCTTCTAGGCCCTATCGGA CGCGAGATTTTCTTTGTCGGCCAGCTGCTGTTCATCATCTTCTTGATGGCCAGCCACATTCTCACATTCTCGGTG TTGTTCAACACCATCACGAACCACGGTACCTGCACTATTGTATTTGGAGTTGTCGGCTTGGTCGTCAGCTGTGTT GCGGCCCTCCCGCGGACAGCAGAGAAGGTCTTTTGGATGTCCATCATCTCTGCCATCAGTATCCTGGTAGCCACT ATCGTCACGATGATTTCCATCGGTGTGCAGGCGCCCTCTGATGTCCAGAACGATATCGTCGCGACCCCGACCTTC CAGGAAGGCTTCTTGGCGGTTACCAACATCGTCTTTGCCTTCATTGCTCACGTGTCTTTCTTCGGTATCATGTCG GAGATGCAGGATCCCCGCGATTTCCCCAAGGCCCTCGCTATGCTCCAGGTTATCGATACTACTATGTATGTTGTG ACGGCTATGGTAATCTACTGCTATGCGGGCCCGACTGTCGAGTCTCCGGCTCTATCGTCGGCTGGACCTATAATG AAGAAAGTTGCCTATGGCCTGGCAATCCCAACGGTCATTGTTGCCGGTGTTGTTTTCGGCCATGTTGCATGCAAG TACATCTATGTTCGAATCTTCCGCGGCGATCGCTCCCACCACATGCACCAGAAGACTTTCTTGGCTACAGGTACA TGGGTCGCGATCGGCCTGACTACCTGGACTGTTGCGTGGGTCATTGCAGAGTCCATTCCAGTGTTCAACGAGTTG TTGAGTTTGATTAGTGCCCTATTCGGAAGCTGGTTTAGCTACGGCCTCCCTGCCATTTTCTGGTTCATGATGAAC AAGGGAAAGTTGTTCTCTTCAACTAGAAAGATAGCCCTGACTATTATCAACTTGGCCATTCTTGGAATTGCTTGT ACTATTTGTGGATTGGGACTCTATGTCTCGGGCGTGGCTATCAACGAGAGCTCGTCCAATGCCAGCTGGACCTGT GCCAACAATGCCACCTAG |
Gene | >Pro_DTO377G3_2|g3738.t1 ATGAGTGTCCCCGAAGCACCCCATCCTATTCAGGACTACGAAGTGTACAATGACTCAACCGACATGGAGAAGAAG GCGTACCCGGTCGACCCCCCGGATGATCCCTTTGGGAACGAAGAATCTGGGGAAGTAAAGTATCGTATTATGCCA TGGTGGTCAGTATCTCACTCTGTTTACTATTTTTATTGCATCAAAGAGCACATTTCTGACTTTTATATACAGGCA AGCTGGAACGTGTGAGAGCCCATCATTAACCCTAGTCAACAGGAACCCCATTCTAACACTGTTCATGTAGTGATG GTTGCTGAAAACATTTCGCTGGGTATTCTATCTCTTCCATCCGCAGTAGCAACCCTCGGAATCATCCCGTAAGAA AATTTCTACCTCCACGATGCAGAAAGAAGGCTGACATCTCCCAGAGCATTTGTCATTATTATGTTTTTGTCCGCC ATCTCGTGGTACACTGGATACACCATGGGCCAGTTCAAGCAGCGTTATCCCCAGGTCCACAGCATGGGCGATGCG GGCGAGCTTCTTCTAGGCCCTATCGGACGCGAGATTTTCTTTGTCGGCCAGCTGCTGTTCATCATCTTCTTGATG GCCAGCCACATTCTCACATTCTCGGTGTTGTTCAACACCATCACGAACCACGGTACCTGCACTATTGTATTTGGA GTTGTCGGCTTGGTCGTCAGCTGTGTTGCGGCCCTCCCGCGGACAGCAGAGAAGGTCTTTTGGATGTCCATCATC TCTGCCATCAGTATCCTGGTAGCCACTATCGTCACGATGATTTCCATCGGTGTGCAGGCGCCCTCTGATGTCCAG AACGATATCGTCGCGACCCCGACCTTCCAGGAAGGCTTCTTGGCGGTTACCAACATCGTCTTTGCCTTCATTGCT CACGTGTCTTTCTTCGGTATCATGTCGGAGATGCAGGATCCCCGCGATTTCCCCAAGGCCCTCGCTATGCTCCAG GTTATCGATACTACTATGTATGTTGTGACGGCTATGGTAATCTACTGCTATGCGGGCCCGACTGTCGAGTCTCCG GCTCTATCGTCGGCTGGACCTATAATGAAGAAAGTTGCCTATGGCCTGGCAATCCCAACGGTGTGTTATATCTCC TTGCAGTCGATTCGGGAGTCTGTTCTAATCTCTGATAGGTCATTGTTGCCGGTGTTGTTTTCGGCCATGTTGCAT GCAAGTACATCTATGTTCGAATCTTCCGCGGCGATCGCTCCCACCACATGCACCAGAAGACTTTCTTGGCTACAG GTACATGGGTCGCGATCGGCCTGACTACCTGGACTGTTGCGTGGGTCATTGCAGAGTCCATTCCAGTGTTCAACG AGTTGTTGAGTTTGATTGTATGTTCTATACTCATTTATTACCGTGCGTCTACTAAGTTGTTATACAGAGTGCCCT ATTCGGAAGCTGGTTTAGCTGTAAGTCGACTTCTGAGACTAAGATTGATGCGAAATAGATTACTGACTGAGAACA GACGGCCTCCCTGCCATTTTCTGGTTCATGATGAACAAGGGAAAGTTGTTCTCTTCAACTAGAAAGATAGCCCTG ACTATTATCAACTTGGCCATTCTTGGAATTGCTTGTACTATTGTATGTTTTGTCTCTCTGTGTGATTCTGAATTT CCTGCTGACAAGAATAGTGTGGATTGGGACTCTATGTCTCGGGCGTGGCTATCAACGAGAGCTCGTCCAATGCCA GCTGGACCTGTGCCAACAATGCCACCTAG |