Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g373.t1
Gene name
Locationscaffold_01:946918..949040
Strand-
Gene length (bp)2122
Transcript length (bp)1917
Coding sequence length (bp)1917
Protein length (aa) 639

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01544 CorA CorA-like Mg2+ transporter protein 4.1E-18 511 606

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0030001 metal ion transport Yes
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006810 transport No
GO:0008150 biological_process No
GO:0005575 cellular_component No
GO:0022857 transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0008324 cation transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0006812 cation transport No
GO:0006811 ion transport No
GO:0015075 ion transmembrane transporter activity No
GO:0051179 localization No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

Domain # Start End Length
1 558 580 22
2 590 608 18

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 84.84 51.60 118.08
5d_25C Five days - 25 degrees Celsius 76.42 46.80 106.04
7d_25C Seven days - 25 degrees Celsius 76.14 46.59 105.68
10d_25C Ten days - 25 degrees Celsius 83.31 50.82 115.81
7d_15C Seven days - 15 degrees Celsius 87.49 51.96 123.01
7d_30C Seven days - 30 degrees Celsius 59.47 35.61 83.33

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.714076 no
3d_25C 7d_25C 0.705912 no
3d_25C 7d_15C 0.928840 no
3d_25C 7d_30C 0.108295 no
3d_25C 10d_25C 0.958719 no
5d_25C 7d_25C 0.991132 no
5d_25C 7d_15C 0.620390 no
5d_25C 7d_30C 0.281659 no
5d_25C 10d_25C 0.764657 no
7d_25C 7d_15C 0.615026 no
7d_25C 7d_30C 0.300877 no
7d_25C 10d_25C 0.754442 no
7d_15C 7d_30C 0.080312 no
7d_15C 10d_25C 0.881880 no
7d_30C 10d_25C 0.122452 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g373.t1
MSIHSVDYAQQGPTRPEVDVEAGRPSVSSQVAPTVGEREGAASPAFTTAARVNSTETTKRRARRNTARSYHPEGF
AQDPNWQPGTEPGIDPTKPLPPYTSEWSSNIPADLQRRCQITVVDFSQHEMRQYELDNDTLEQFLQREKEPWVQC
RWINVNGLSWDVIKILGNHKRLHRLAIEDVVHDTNRTKVDWYSDHAFVVLTLQKLVKIQEEDSSDSEDEEENPVS
PWKSRDRKSSVVSDKSSISLRRPTKWSVIMAALKDIFRFRSSTKQERKDMAKYGSSVRPGLGQNSTQNSHFGNVG
ATTDTSARSLQRYRGGPNEDRIEFMERHAALSAKGLCVTLEQVSIFLHTDNEVTSFFETSADDIESPIVRRLNTP
ETILRQSCDASMLLQAILDAVIDLAIPVTMAYQDAIGDLELEVLTDPDIEQSKSLYILTSEIAVLRNHMQPIVAV
INALRDHRSEPVGTPGFGVLRNPLSPGATPAEFLDPRPHIGTVPPNLKSVGGTGVTISSMCHTYLGDALDHCITI
VEGYDQMRRNADNMIDLIFNTIGAYQNESMKQLTLVTCLYLPMTFLTGYFGMNFTHFAGIEHSEGYFWKIAVPFV
LVTIFYLMRDKIQRYAVMLAQRRLIVSSRKQRRERTKK*
Coding >Pro_DTO377G3_2|g373.t1
ATGAGCATACACTCAGTCGATTATGCACAGCAGGGTCCGACACGACCCGAGGTCGATGTTGAGGCGGGTCGCCCG
TCAGTCAGTTCCCAAGTCGCTCCAACAGTAGGAGAGAGAGAGGGAGCCGCGTCTCCCGCATTCACCACAGCAGCA
CGAGTGAACTCCACCGAGACGACAAAACGCCGAGCCAGACGCAATACCGCCCGCTCATACCACCCCGAAGGATTC
GCACAAGATCCCAATTGGCAACCAGGAACCGAACCCGGCATTGACCCAACCAAGCCGCTACCGCCATACACGTCA
GAATGGTCGTCCAACATACCAGCGGACCTACAACGACGCTGCCAGATCACCGTGGTGGACTTCTCACAACATGAA
ATGCGACAGTATGAGTTAGACAATGACACACTGGAGCAATTTTTGCAGCGGGAGAAAGAGCCCTGGGTGCAATGC
CGGTGGATCAATGTCAATGGGTTGAGCTGGGATGTGATCAAGATTCTTGGAAATCATAAGAGATTGCATCGGCTT
GCAATTGAGGATGTTGTCCATGACACTAACCGCACGAAAGTGGATTGGTACTCGGACCATGCCTTCGTTGTACTG
ACATTGCAAAAGTTGGTGAAGATACAAGAAGAGGACTCCTCTGATTCGGAAGATGAGGAGGAAAATCCAGTCAGT
CCATGGAAGTCAAGGGACCGGAAAAGTTCTGTGGTCAGTGACAAGAGCTCGATTTCGTTGAGGCGACCCACGAAG
TGGAGTGTTATTATGGCGGCATTGAAGGACATTTTCAGGTTCAGATCCTCCACAAAACAGGAGCGCAAGGATATG
GCGAAATATGGATCGAGCGTTCGTCCTGGGCTTGGACAAAATTCAACACAAAATTCCCATTTTGGAAATGTTGGG
GCCACCACAGACACATCTGCCAGGAGTCTTCAGCGATATCGCGGTGGTCCGAATGAAGATCGAATTGAGTTCATG
GAACGCCATGCTGCACTTTCTGCCAAAGGATTATGTGTCACTTTGGAACAAGTTTCGATCTTCCTACATACCGAT
AATGAGGTGACCTCCTTTTTTGAAACGAGCGCGGATGACATCGAGTCGCCAATTGTCAGGCGCCTCAATACGCCA
GAGACTATCCTTCGACAGTCATGCGATGCCAGTATGCTTTTGCAGGCCATTCTGGATGCTGTGATTGATCTTGCG
ATTCCAGTAACGATGGCTTATCAAGACGCCATCGGAGACCTCGAGCTGGAGGTTCTGACTGATCCAGACATTGAA
CAGTCAAAGTCCTTATATATTTTGACATCTGAGATTGCTGTTCTGCGGAACCATATGCAGCCTATAGTGGCTGTG
ATTAACGCTCTCCGTGATCACCGGTCTGAGCCCGTCGGCACACCAGGCTTTGGTGTCCTAAGGAATCCCCTTAGC
CCAGGTGCAACTCCTGCAGAATTTCTTGATCCCCGCCCACATATTGGGACTGTACCGCCAAATCTGAAGAGTGTC
GGAGGCACAGGTGTTACGATCAGCTCTATGTGCCATACATATTTGGGCGATGCCCTAGATCATTGCATTACTATC
GTTGAAGGGTACGATCAGATGCGGCGCAACGCTGATAACATGATTGACCTCATTTTCAACACTATTGGTGCCTAC
CAGAACGAAAGTATGAAGCAGCTTACTCTTGTGACTTGTCTTTATCTTCCTATGACATTCTTGACAGGTTATTTC
GGAATGAACTTCACGCATTTCGCGGGAATCGAACACAGTGAAGGATATTTCTGGAAGATTGCAGTGCCGTTCGTC
CTCGTTACGATTTTCTACCTGATGCGCGACAAAATACAACGCTACGCTGTCATGCTTGCTCAGCGACGTTTGATT
GTTAGCTCGAGGAAGCAGAGACGAGAGAGGACGAAGAAATAG
Transcript >Pro_DTO377G3_2|g373.t1
ATGAGCATACACTCAGTCGATTATGCACAGCAGGGTCCGACACGACCCGAGGTCGATGTTGAGGCGGGTCGCCCG
TCAGTCAGTTCCCAAGTCGCTCCAACAGTAGGAGAGAGAGAGGGAGCCGCGTCTCCCGCATTCACCACAGCAGCA
CGAGTGAACTCCACCGAGACGACAAAACGCCGAGCCAGACGCAATACCGCCCGCTCATACCACCCCGAAGGATTC
GCACAAGATCCCAATTGGCAACCAGGAACCGAACCCGGCATTGACCCAACCAAGCCGCTACCGCCATACACGTCA
GAATGGTCGTCCAACATACCAGCGGACCTACAACGACGCTGCCAGATCACCGTGGTGGACTTCTCACAACATGAA
ATGCGACAGTATGAGTTAGACAATGACACACTGGAGCAATTTTTGCAGCGGGAGAAAGAGCCCTGGGTGCAATGC
CGGTGGATCAATGTCAATGGGTTGAGCTGGGATGTGATCAAGATTCTTGGAAATCATAAGAGATTGCATCGGCTT
GCAATTGAGGATGTTGTCCATGACACTAACCGCACGAAAGTGGATTGGTACTCGGACCATGCCTTCGTTGTACTG
ACATTGCAAAAGTTGGTGAAGATACAAGAAGAGGACTCCTCTGATTCGGAAGATGAGGAGGAAAATCCAGTCAGT
CCATGGAAGTCAAGGGACCGGAAAAGTTCTGTGGTCAGTGACAAGAGCTCGATTTCGTTGAGGCGACCCACGAAG
TGGAGTGTTATTATGGCGGCATTGAAGGACATTTTCAGGTTCAGATCCTCCACAAAACAGGAGCGCAAGGATATG
GCGAAATATGGATCGAGCGTTCGTCCTGGGCTTGGACAAAATTCAACACAAAATTCCCATTTTGGAAATGTTGGG
GCCACCACAGACACATCTGCCAGGAGTCTTCAGCGATATCGCGGTGGTCCGAATGAAGATCGAATTGAGTTCATG
GAACGCCATGCTGCACTTTCTGCCAAAGGATTATGTGTCACTTTGGAACAAGTTTCGATCTTCCTACATACCGAT
AATGAGGTGACCTCCTTTTTTGAAACGAGCGCGGATGACATCGAGTCGCCAATTGTCAGGCGCCTCAATACGCCA
GAGACTATCCTTCGACAGTCATGCGATGCCAGTATGCTTTTGCAGGCCATTCTGGATGCTGTGATTGATCTTGCG
ATTCCAGTAACGATGGCTTATCAAGACGCCATCGGAGACCTCGAGCTGGAGGTTCTGACTGATCCAGACATTGAA
CAGTCAAAGTCCTTATATATTTTGACATCTGAGATTGCTGTTCTGCGGAACCATATGCAGCCTATAGTGGCTGTG
ATTAACGCTCTCCGTGATCACCGGTCTGAGCCCGTCGGCACACCAGGCTTTGGTGTCCTAAGGAATCCCCTTAGC
CCAGGTGCAACTCCTGCAGAATTTCTTGATCCCCGCCCACATATTGGGACTGTACCGCCAAATCTGAAGAGTGTC
GGAGGCACAGGTGTTACGATCAGCTCTATGTGCCATACATATTTGGGCGATGCCCTAGATCATTGCATTACTATC
GTTGAAGGGTACGATCAGATGCGGCGCAACGCTGATAACATGATTGACCTCATTTTCAACACTATTGGTGCCTAC
CAGAACGAAAGTATGAAGCAGCTTACTCTTGTGACTTGTCTTTATCTTCCTATGACATTCTTGACAGGTTATTTC
GGAATGAACTTCACGCATTTCGCGGGAATCGAACACAGTGAAGGATATTTCTGGAAGATTGCAGTGCCGTTCGTC
CTCGTTACGATTTTCTACCTGATGCGCGACAAAATACAACGCTACGCTGTCATGCTTGCTCAGCGACGTTTGATT
GTTAGCTCGAGGAAGCAGAGACGAGAGAGGACGAAGAAATAG
Gene >Pro_DTO377G3_2|g373.t1
ATGAGCATACACTCAGTCGATTATGCACAGCAGGGTCCGACACGACCCGAGGTCGATGTTGAGGCGGGTCGCCCG
TCAGTCAGTTCCCAAGTCGCTCCAACAGTAGGAGAGAGAGAGGGAGCCGCGTCTCCCGCATTCACCACAGCAGCA
CGAGTGAACTCCACCGAGACGACAAAACGCCGAGCCAGACGCAATACCGCCCGCTCATACCACCCCGAAGGATTC
GCACAAGATCCCAATTGGCAACCAGGAACCGAACCCGGCATTGACCCAACCAAGCCGCTACCGCCATACACGTCA
GAATGGTCGTCCAACATACCAGCGGACCTACAACGACGCTGCCAGATCACCGTGGTGGACTTCTCACAACATGAA
ATGCGACAGTATGAGTTAGACAATGACACACTGGAGCAATTTTTGCAGCGGGAGAAAGAGCCCTGGGTGCAATGC
CGGTGGATCAATGTCAATGGGTTGAGCTGGGATGTGATCAAGATTCTTGGAAATCATAAGAGATTGCATCGGCTT
GCAATTGAGGATGTTGTCCATGACACTAACCGCACGAAAGTGGATTGGTACTCGGACCATGCCTTCGTTGTACTG
ACATTGCAAAAGTTGGTGAAGATACAAGAAGAGGACTCCTCTGATTCGGAAGATGAGGAGGAAAATCCAGTCAGT
CCATGGAAGTCAAGGGACCGGAAAAGTTCTGTGGTCAGTGACAAGAGCTCGATTTCGTTGAGGCGACCCACGAAG
TGGAGTGTTATTATGGCGGCATTGAAGGACATTTTCAGGTTCAGATCCTCCACAAAACAGGAGCGCAAGGATATG
GCGAAATATGGATCGAGCGTTCGTCCTGGGCTTGGACAAAATTCAACACAAAATTCCCATTTTGGAAATGTTGGG
GCCACCACAGACACATCTGCCAGGAGTCTTCAGCGATATCGCGGTGGTCCGAATGAAGATCGAATTGAGTTCATG
GAACGCCATGCTGCACTTTCTGCCAAAGGATTATGTGTCACTTTGGAACAAGTTTCGATCTTCCTACATACCGAT
AATGAGGTGACCTCCTTTTTTGAAACGAGCGCGGATGACATCGAGTCGCCAATTGTCAGGCGCCTCAATACGCCA
GAGACTATCCTTCGACAGTCATGCGATGCCAGTATGCTTTTGCAGGCCATTCTGGATGCTGTGATTGATCTTGCG
ATTCCAGTAACGATGGCTTATCAAGACGCCATCGGAGACCTCGAGCTGGAGGTTCTGACTGATCCAGACATTGAA
CAGTCAAAGTCCTTATATATTTTGACATCTGAGATTGCTGTTCTGCGGAACCATATGCAGCCTATAGTGGCTGTG
ATTAACGCTCTCCGTGATCACCGGTCTGAGCCCGTCGGCACACCAGGCTTTGGTGTCCTAAGGAATCCCCTTAGC
CCAGGTGCAACTCCTGCAGAATTTCTTGATCCCCGCCCACATATTGGGACTGTACCGCCAAATCTGAAGAGTGTC
GGAGGCACAGGTGTTACGATCAGCTCTATGTGCCATACATATTTGGGCGATGCCCTAGATCATTGCATTACTATC
GTTGAAGGGTACGATCAGATGCGGCGCAACGCTGATAACATGATTGACCTCATTTTCAACACTATTGGTACGTTC
AACTTCTATGGATAATTCAAGAGAAAAACAACGGACTAATATCCTGTGCAGGTGCCTACCAGAACGAAAGTATGA
AGCAGCTTACTCTTGTGACTTGTCTTTATCTTCCTATGACATTCTTGACAGTATGTATGACTTGAAACTATGAAG
AAAATCCTCTAACATTTTTAGGGTTATTTCGGAATGAACTTCACGCATTTCGCGGGAATCGAACACAGTGAAGGG
TATGTCTTTCGACCCCTTTCTTCTAGACTTGTTGCTGACTTTAGAAGATATTTCTGGAAGATTGCAGTGCCGTTC
GTCCTCGTTACGATTTTCTACCTGATGTGAGTTCTGATATTCCTCTCGAAAACAGCCGACACTAACCTGCATCTT
TAGGCGCGACAAAATACAACGCTACGCTGTCATGCTTGCTCAGCGACGTTTGATTGTTAGCTCGAGGAAGCAGAG
ACGAGAGAGGACGAAGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail