Protein ID | Pro_DTO377G3_2|g3729.t1 |
Gene name | |
Location | scaffold_06:577978..578931 |
Strand | + |
Gene length (bp) | 953 |
Transcript length (bp) | 780 |
Coding sequence length (bp) | 780 |
Protein length (aa) | 260 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13499 | EF-hand_7 | EF-hand domain pair | 2.6E-09 | 194 | 255 |
PF13833 | EF-hand_8 | EF-hand domain pair | 6.6E-07 | 208 | 254 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005509 | calcium ion binding | Yes |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046872 | metal ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 2 |
Orthogroup | 4709 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3729.t1 MASGQPFASRSYAGTKLPERSVNTNAMPFSASSFSRHRGLGNTNQGEFPDGQKQMQQSAPAPATNAVSHGPAQDA NPLNRLTEEQREEINEAFTLFDLDRDRHLDYHELRVAFRALGFTLGKQELISLLTTYGVPRPQVQQQQGAAGNQH AQSQPLASNKGPVSNPQHPSNLLMPLSSFQAVTALKILERDPRDEILRAFELFDEGGKGFIDLEDLRRVARELGE TGLEEEELRAMIEEFDLEGVGGVTREAFVGICWQ* |
Coding | >Pro_DTO377G3_2|g3729.t1 ATGGCCTCTGGCCAACCCTTCGCGTCGCGCTCCTACGCCGGCACGAAACTCCCAGAACGCTCCGTCAACACGAAC GCGATGCCCTTCAGCGCCTCCTCATTCTCACGGCATCGCGGTCTGGGAAATACCAACCAAGGCGAATTTCCAGAT GGCCAAAAGCAGATGCAGCAGTCCGCGCCCGCGCCCGCCACAAACGCCGTATCCCATGGCCCAGCGCAGGACGCG AATCCGCTGAACAGACTCACGGAAGAGCAGAGGGAAGAGATCAACGAAGCTTTCACCCTCTTCGACCTCGACCGC GATCGCCACCTCGACTACCACGAGCTCCGCGTCGCCTTCCGCGCTCTAGGCTTCACACTCGGCAAACAAGAGCTC ATCTCCCTGCTAACAACGTACGGCGTACCCCGTCCCCAAGTCCAGCAACAACAAGGCGCCGCCGGCAACCAACAC GCCCAATCCCAACCCCTCGCCTCCAACAAAGGGCCCGTCTCGAACCCGCAACATCCGTCCAATCTGCTCATGCCG CTCTCGTCGTTCCAGGCCGTCACGGCGTTGAAGATCCTCGAGCGGGACCCGCGCGACGAGATCCTGCGCGCGTTC GAGCTGTTCGATGAGGGCGGCAAGGGGTTCATTGACCTTGAGGATTTGAGGCGTGTTGCGAGGGAGTTGGGGGAG ACTGGGCTTGAGGAGGAGGAGCTTAGAGCTATGATTGAGGAGTTTGATCTTGAGGGCGTTGGTGGTGTTACTCGG GAGGCTTTTGTTGGGATTTGTTGGCAATGA |
Transcript | >Pro_DTO377G3_2|g3729.t1 ATGGCCTCTGGCCAACCCTTCGCGTCGCGCTCCTACGCCGGCACGAAACTCCCAGAACGCTCCGTCAACACGAAC GCGATGCCCTTCAGCGCCTCCTCATTCTCACGGCATCGCGGTCTGGGAAATACCAACCAAGGCGAATTTCCAGAT GGCCAAAAGCAGATGCAGCAGTCCGCGCCCGCGCCCGCCACAAACGCCGTATCCCATGGCCCAGCGCAGGACGCG AATCCGCTGAACAGACTCACGGAAGAGCAGAGGGAAGAGATCAACGAAGCTTTCACCCTCTTCGACCTCGACCGC GATCGCCACCTCGACTACCACGAGCTCCGCGTCGCCTTCCGCGCTCTAGGCTTCACACTCGGCAAACAAGAGCTC ATCTCCCTGCTAACAACGTACGGCGTACCCCGTCCCCAAGTCCAGCAACAACAAGGCGCCGCCGGCAACCAACAC GCCCAATCCCAACCCCTCGCCTCCAACAAAGGGCCCGTCTCGAACCCGCAACATCCGTCCAATCTGCTCATGCCG CTCTCGTCGTTCCAGGCCGTCACGGCGTTGAAGATCCTCGAGCGGGACCCGCGCGACGAGATCCTGCGCGCGTTC GAGCTGTTCGATGAGGGCGGCAAGGGGTTCATTGACCTTGAGGATTTGAGGCGTGTTGCGAGGGAGTTGGGGGAG ACTGGGCTTGAGGAGGAGGAGCTTAGAGCTATGATTGAGGAGTTTGATCTTGAGGGCGTTGGTGGTGTTACTCGG GAGGCTTTTGTTGGGATTTGTTGGCAATGA |
Gene | >Pro_DTO377G3_2|g3729.t1 ATGGCCTCTGGCCAACCCTTCGCGTCGCGCTCCTACGCCGGCACGAAACTCCCAGAACGCTCCGTCAACACGAAC GCGATGCCCTTCAGCGCCTCCTCATTCTCACGGCATCGCGGTCTGGGAAATACCAACCAAGGCGAATTTCCAGAT GGCCAAAAGCAGATGCAGCAGTCCGCGCCCGCGCCCGCCACAAACGCCGTATCCCATGGCCCAGCGCAGGACGCG AATCCGCTGAACAGACTCACGGAAGAGCAGAGGGAAGAGATCAACGAAGCTGTAAGGGATACCCAATCCACCCAT CTATGACACTACTGTTCTCCTAAATTACTGCAATATCCTGCAACCCCTCCCTCCTCCCTCTCACCTCCCTCCAAG AGTGAAAAGAAAAGAAACCAAACCACAACAACCAAACCCCATCCAAAACCCCCAGCTAACCCAAACCCCTCAAGT TCACCCTCTTCGACCTCGACCGCGATCGCCACCTCGACTACCACGAGCTCCGCGTCGCCTTCCGCGCTCTAGGCT TCACACTCGGCAAACAAGAGCTCATCTCCCTGCTAACAACGTACGGCGTACCCCGTCCCCAAGTCCAGCAACAAC AAGGCGCCGCCGGCAACCAACACGCCCAATCCCAACCCCTCGCCTCCAACAAAGGGCCCGTCTCGAACCCGCAAC ATCCGTCCAATCTGCTCATGCCGCTCTCGTCGTTCCAGGCCGTCACGGCGTTGAAGATCCTCGAGCGGGACCCGC GCGACGAGATCCTGCGCGCGTTCGAGCTGTTCGATGAGGGCGGCAAGGGGTTCATTGACCTTGAGGATTTGAGGC GTGTTGCGAGGGAGTTGGGGGAGACTGGGCTTGAGGAGGAGGAGCTTAGAGCTATGATTGAGGAGTTTGATCTTG AGGGCGTTGGTGGTGTTACTCGGGAGGCTTTTGTTGGGATTTGTTGGCAATGA |