Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g3729.t1
Gene name
Location	scaffold_06:577978..578931
Strand	+
Gene length (bp)	953
Transcript length (bp)	780
Coding sequence length (bp)	780
Protein length (aa)	260

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13499	EF-hand_7	EF-hand domain pair	2.6E-09	194	255
PF13833	EF-hand_8	EF-hand domain pair	6.6E-07	208	254

GO

GO Term	Description	Terminal node
GO:0005509	calcium ion binding	Yes
GO:0005488	binding	No
GO:0043167	ion binding	No
GO:0046872	metal ion binding	No
GO:0043169	cation binding	No
GO:0003674	molecular_function	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	4709
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g5305.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g9528.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g1835.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g1679.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g6803.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g7097.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g4348.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g3446.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g5786.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g6696.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g9567.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g2801.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g5586.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g3858.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g477.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g7596.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g6405.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g5846.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g4694.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g5296.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g7481.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g6231.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g3428.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g5464.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g2518.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g7629.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g6473.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g3249.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g2609.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g5008.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g3462.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g4145.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g8275.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g3729.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g3729.t1 MASGQPFASRSYAGTKLPERSVNTNAMPFSASSFSRHRGLGNTNQGEFPDGQKQMQQSAPAPATNAVSHGPAQDA NPLNRLTEEQREEINEAFTLFDLDRDRHLDYHELRVAFRALGFTLGKQELISLLTTYGVPRPQVQQQQGAAGNQH AQSQPLASNKGPVSNPQHPSNLLMPLSSFQAVTALKILERDPRDEILRAFELFDEGGKGFIDLEDLRRVARELGE TGLEEEELRAMIEEFDLEGVGGVTREAFVGICWQ*
Coding	>Pro_DTO377G3_2|g3729.t1 ATGGCCTCTGGCCAACCCTTCGCGTCGCGCTCCTACGCCGGCACGAAACTCCCAGAACGCTCCGTCAACACGAAC GCGATGCCCTTCAGCGCCTCCTCATTCTCACGGCATCGCGGTCTGGGAAATACCAACCAAGGCGAATTTCCAGAT GGCCAAAAGCAGATGCAGCAGTCCGCGCCCGCGCCCGCCACAAACGCCGTATCCCATGGCCCAGCGCAGGACGCG AATCCGCTGAACAGACTCACGGAAGAGCAGAGGGAAGAGATCAACGAAGCTTTCACCCTCTTCGACCTCGACCGC GATCGCCACCTCGACTACCACGAGCTCCGCGTCGCCTTCCGCGCTCTAGGCTTCACACTCGGCAAACAAGAGCTC ATCTCCCTGCTAACAACGTACGGCGTACCCCGTCCCCAAGTCCAGCAACAACAAGGCGCCGCCGGCAACCAACAC GCCCAATCCCAACCCCTCGCCTCCAACAAAGGGCCCGTCTCGAACCCGCAACATCCGTCCAATCTGCTCATGCCG CTCTCGTCGTTCCAGGCCGTCACGGCGTTGAAGATCCTCGAGCGGGACCCGCGCGACGAGATCCTGCGCGCGTTC GAGCTGTTCGATGAGGGCGGCAAGGGGTTCATTGACCTTGAGGATTTGAGGCGTGTTGCGAGGGAGTTGGGGGAG ACTGGGCTTGAGGAGGAGGAGCTTAGAGCTATGATTGAGGAGTTTGATCTTGAGGGCGTTGGTGGTGTTACTCGG GAGGCTTTTGTTGGGATTTGTTGGCAATGA
Transcript	>Pro_DTO377G3_2|g3729.t1 ATGGCCTCTGGCCAACCCTTCGCGTCGCGCTCCTACGCCGGCACGAAACTCCCAGAACGCTCCGTCAACACGAAC GCGATGCCCTTCAGCGCCTCCTCATTCTCACGGCATCGCGGTCTGGGAAATACCAACCAAGGCGAATTTCCAGAT GGCCAAAAGCAGATGCAGCAGTCCGCGCCCGCGCCCGCCACAAACGCCGTATCCCATGGCCCAGCGCAGGACGCG AATCCGCTGAACAGACTCACGGAAGAGCAGAGGGAAGAGATCAACGAAGCTTTCACCCTCTTCGACCTCGACCGC GATCGCCACCTCGACTACCACGAGCTCCGCGTCGCCTTCCGCGCTCTAGGCTTCACACTCGGCAAACAAGAGCTC ATCTCCCTGCTAACAACGTACGGCGTACCCCGTCCCCAAGTCCAGCAACAACAAGGCGCCGCCGGCAACCAACAC GCCCAATCCCAACCCCTCGCCTCCAACAAAGGGCCCGTCTCGAACCCGCAACATCCGTCCAATCTGCTCATGCCG CTCTCGTCGTTCCAGGCCGTCACGGCGTTGAAGATCCTCGAGCGGGACCCGCGCGACGAGATCCTGCGCGCGTTC GAGCTGTTCGATGAGGGCGGCAAGGGGTTCATTGACCTTGAGGATTTGAGGCGTGTTGCGAGGGAGTTGGGGGAG ACTGGGCTTGAGGAGGAGGAGCTTAGAGCTATGATTGAGGAGTTTGATCTTGAGGGCGTTGGTGGTGTTACTCGG GAGGCTTTTGTTGGGATTTGTTGGCAATGA
Gene	>Pro_DTO377G3_2|g3729.t1 ATGGCCTCTGGCCAACCCTTCGCGTCGCGCTCCTACGCCGGCACGAAACTCCCAGAACGCTCCGTCAACACGAAC GCGATGCCCTTCAGCGCCTCCTCATTCTCACGGCATCGCGGTCTGGGAAATACCAACCAAGGCGAATTTCCAGAT GGCCAAAAGCAGATGCAGCAGTCCGCGCCCGCGCCCGCCACAAACGCCGTATCCCATGGCCCAGCGCAGGACGCG AATCCGCTGAACAGACTCACGGAAGAGCAGAGGGAAGAGATCAACGAAGCTGTAAGGGATACCCAATCCACCCAT CTATGACACTACTGTTCTCCTAAATTACTGCAATATCCTGCAACCCCTCCCTCCTCCCTCTCACCTCCCTCCAAG AGTGAAAAGAAAAGAAACCAAACCACAACAACCAAACCCCATCCAAAACCCCCAGCTAACCCAAACCCCTCAAGT TCACCCTCTTCGACCTCGACCGCGATCGCCACCTCGACTACCACGAGCTCCGCGTCGCCTTCCGCGCTCTAGGCT TCACACTCGGCAAACAAGAGCTCATCTCCCTGCTAACAACGTACGGCGTACCCCGTCCCCAAGTCCAGCAACAAC AAGGCGCCGCCGGCAACCAACACGCCCAATCCCAACCCCTCGCCTCCAACAAAGGGCCCGTCTCGAACCCGCAAC ATCCGTCCAATCTGCTCATGCCGCTCTCGTCGTTCCAGGCCGTCACGGCGTTGAAGATCCTCGAGCGGGACCCGC GCGACGAGATCCTGCGCGCGTTCGAGCTGTTCGATGAGGGCGGCAAGGGGTTCATTGACCTTGAGGATTTGAGGC GTGTTGCGAGGGAGTTGGGGGAGACTGGGCTTGAGGAGGAGGAGCTTAGAGCTATGATTGAGGAGTTTGATCTTG AGGGCGTTGGTGGTGTTACTCGGGAGGCTTTTGTTGGGATTTGTTGGCAATGA