© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3719.t1 |
| Gene name | |
| Location | scaffold_06:546173..547018 |
| Strand | + |
| Gene length (bp) | 845 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.5E-43 | 13 | 256 |
| PF00106 | adh_short | short chain dehydrogenase | 2.4E-39 | 8 | 205 |
| PF08659 | KR | KR domain | 1.5E-10 | 10 | 132 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3719.t1 MASVKSRVFAITGGASGIGAATSRLLAERGATAVCVGDISCKNFDELKESMKKINPATEVHCSLLDVTSPTEVEK WVKSIVAKFGNLHGAANIAGIAQGAGLRNSPTILEEGDEEWSKVLKVNLDGVFYCTRAEVRAMKSLPSDDRSIVN VGSIAALSHIPDVYAYGTSKGASTYFTTCVAADTFPFGIRVNSVSPGITDTPLLPQFMPKAQTSDEVKEVYRKEG FSVVKAGDVARTIVWLLSEDSSPVYGANINVGASMP* |
| Coding | >Pro_DTO377G3_2|g3719.t1 ATGGCATCCGTGAAATCCAGGGTATTTGCCATCACTGGTGGTGCATCTGGCATCGGCGCAGCCACTAGCAGACTG CTAGCTGAGCGCGGTGCTACTGCTGTTTGTGTGGGCGATATATCCTGCAAGAACTTTGACGAGCTGAAGGAATCT ATGAAGAAAATCAACCCAGCCACAGAGGTGCACTGCAGTTTGTTAGATGTGACTTCGCCCACTGAGGTTGAAAAA TGGGTGAAGAGTATCGTGGCCAAGTTTGGTAACCTTCACGGGGCCGCAAACATTGCCGGCATTGCCCAGGGTGCT GGGCTCCGAAACTCGCCTACAATTCTGGAGGAGGGAGATGAGGAATGGAGCAAGGTACTCAAAGTAAATCTTGAT GGTGTTTTCTACTGCACCCGTGCGGAGGTTCGCGCTATGAAATCGCTTCCCTCTGATGACCGCAGCATCGTCAAC GTGGGTAGTATTGCAGCACTGAGCCATATCCCAGATGTGTATGCATACGGAACTTCCAAGGGAGCTTCCACCTAC TTTACAACATGCGTGGCAGCAGATACATTTCCATTCGGGATTCGCGTGAACAGCGTATCTCCAGGGATAACCGAC ACTCCGTTGCTGCCACAGTTTATGCCCAAGGCTCAAACGAGCGATGAGGTCAAAGAGGTCTATAGGAAAGAAGGA TTTTCGGTGGTTAAAGCGGGCGATGTGGCTCGGACGATAGTCTGGTTGCTCAGCGAGGATTCAAGCCCTGTGTAT GGCGCCAATATCAATGTCGGGGCCAGCATGCCCTAG |
| Transcript | >Pro_DTO377G3_2|g3719.t1 ATGGCATCCGTGAAATCCAGGGTATTTGCCATCACTGGTGGTGCATCTGGCATCGGCGCAGCCACTAGCAGACTG CTAGCTGAGCGCGGTGCTACTGCTGTTTGTGTGGGCGATATATCCTGCAAGAACTTTGACGAGCTGAAGGAATCT ATGAAGAAAATCAACCCAGCCACAGAGGTGCACTGCAGTTTGTTAGATGTGACTTCGCCCACTGAGGTTGAAAAA TGGGTGAAGAGTATCGTGGCCAAGTTTGGTAACCTTCACGGGGCCGCAAACATTGCCGGCATTGCCCAGGGTGCT GGGCTCCGAAACTCGCCTACAATTCTGGAGGAGGGAGATGAGGAATGGAGCAAGGTACTCAAAGTAAATCTTGAT GGTGTTTTCTACTGCACCCGTGCGGAGGTTCGCGCTATGAAATCGCTTCCCTCTGATGACCGCAGCATCGTCAAC GTGGGTAGTATTGCAGCACTGAGCCATATCCCAGATGTGTATGCATACGGAACTTCCAAGGGAGCTTCCACCTAC TTTACAACATGCGTGGCAGCAGATACATTTCCATTCGGGATTCGCGTGAACAGCGTATCTCCAGGGATAACCGAC ACTCCGTTGCTGCCACAGTTTATGCCCAAGGCTCAAACGAGCGATGAGGTCAAAGAGGTCTATAGGAAAGAAGGA TTTTCGGTGGTTAAAGCGGGCGATGTGGCTCGGACGATAGTCTGGTTGCTCAGCGAGGATTCAAGCCCTGTGTAT GGCGCCAATATCAATGTCGGGGCCAGCATGCCCTAG |
| Gene | >Pro_DTO377G3_2|g3719.t1 ATGGCATCCGTGAAATCCAGGGTATTTGCCATCACTGGTGGTGCATCTGGCATCGGCGCAGCCACTAGCAGACTG CTAGCTGAGCGCGGTGCTACTGCTGTTTGTGTGGGCGATATATCCTGCAAGAACTTTGACGAGCTGAAGGAATCT ATGAAGAAAATCAACCCAGCCACAGAGGTGCACTGCAGTTTGTTAGATGTGACTTCGCCCACTGAGGTTGAAAAA TGGGTGAAGAGTATCGTGGCCAAGTTTGGTAACCTTCACGGGGCCGCAAACATTGCCGGCATTGCCCAGGGTGCT GGGCTCCGAAACTCGCCTACAATTCTGGAGGAGGGAGATGAGGAATGGAGCAAGGTACTCAAAGTAAATCTTGAT GGTGTTTTCTACTGCACCCGTGCGGAGGTTCGCGCTATGAAATCGCTTCCCTCTGATGACCGCAGCATCGTCAAC GTGGGTAGTATTGCAGCACTGAGCCATATCCCAGATGTGTATGCATACGGAACTTCCAAGGGAGCTTCCACCTAC TTTACAACATGCGTGGCAGCAGATACATTTCCATTCGGGATTCGCGTGAACAGCGTATCTCCAGGTACAGCTCTT ATTGTTCCATGACAGAACGGCTAGATGGGGCTAACAAGTTGTTCACAGGGATAACCGACACTCCGTTGCTGCCAC AGTTTATGCCCAAGGCTCAAACGAGCGATGAGGTCAAAGAGGTCTATAGGAAAGAAGGATTTTCGGTGGTTAAAG CGGGCGATGTGGCTCGGACGATAGTCTGGTTGCTCAGCGAGGATTCAAGCCCTGTGTATGGCGCCAATATCAATG TCGGGGCCAGCATGCCCTAG |