Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3715.t1
Gene name
Locationscaffold_06:531088..533048
Strand-
Gene length (bp)1960
Transcript length (bp)1839
Coding sequence length (bp)1839
Protein length (aa) 613

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.1E-16 418 532

GO

GO Term Description Terminal node
GO:0016887 ATP hydrolysis activity Yes
GO:0005524 ATP binding Yes
GO:0005488 binding No
GO:0032553 ribonucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0043167 ion binding No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0017076 purine nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0016462 pyrophosphatase activity No
GO:0030554 adenyl nucleotide binding No
GO:0000166 nucleotide binding No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No
GO:0003674 molecular_function No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0016787 hydrolase activity No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:1901265 nucleoside phosphate binding No
GO:0017111 nucleoside-triphosphatase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 9.56 4.27 14.85
5d_25C Five days - 25 degrees Celsius 6.60 2.61 10.60
7d_25C Seven days - 25 degrees Celsius 7.16 2.94 11.38
10d_25C Ten days - 25 degrees Celsius 4.34 1.50 7.18
7d_15C Seven days - 15 degrees Celsius 9.64 4.35 14.93
7d_30C Seven days - 30 degrees Celsius 6.18 2.39 9.98

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.299326 no
3d_25C 7d_25C 0.422215 no
3d_25C 7d_15C 0.987140 no
3d_25C 7d_30C 0.202057 no
3d_25C 10d_25C 0.011688 yes
5d_25C 7d_25C 0.868873 no
5d_25C 7d_15C 0.282276 no
5d_25C 7d_30C 0.899008 no
5d_25C 10d_25C 0.253043 no
7d_25C 7d_15C 0.405769 no
7d_25C 7d_30C 0.738113 no
7d_25C 10d_25C 0.142479 no
7d_15C 7d_30C 0.189080 no
7d_15C 10d_25C 0.009770 yes
7d_30C 10d_25C 0.351823 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3715.t1
MKIEIYDGVGAVDDSITEPEVQEIQYEPEGTLCDVRTLYQKSSDGWGQPVWTKEMPIDLPAPVLDAESAQYALLT
KKVKCFDGRRSLSIHSVVVQSERLNEFLKEAMKGYPSVALTLDRPEFCSPFRAFVHRWEEITKLRDEVQDPTTKA
HVDMFYRIMDEELRDVIDSKNELVAKGVITFELVWTIIKPDDVILSSAKEGLRAYSSTRGSSDGEGSPIDYFQAE
YVEFDGTKFGYNTTDFMIPRFEGAMPITSLTIFPLKLHPAKEAVQEMLTARGKKWEALKGYHFRSYDSSTSTNSK
GHVKNRVIIDAQAYNKFAHHKTINFDREIGEELDDAQRLIATPMLNGYALNDKKWRSFHVDHVQDIDWDEQAFES
LVLPREQQGFKDVILAVAKAQSQKKDTFDDVIRGKGQGFIVQLSGPPGVGKTLTAESVAEVMRVPIYVMSAGDLG
VEAKRFESKLKDILELVPKWGAILLLDEADVFMEARDSANLDRNELVSLFLRTLEYYEGILFLTTNRTQNIDPAF
DSRVHLSIAYKDLDAESRRQVWGQFLSRSMNIEAITDEQLDQVAKLQLNGRQIKNIIKTAGLLACSKEREIRFDD
LQTVLALRNLQK*
Coding >Pro_DTO377G3_2|g3715.t1
ATGAAGATCGAAATCTATGATGGAGTTGGTGCTGTCGATGATAGCATCACAGAACCCGAGGTCCAAGAAATCCAG
TATGAGCCTGAGGGTACCCTCTGTGATGTCCGCACCCTCTACCAGAAAAGTTCCGATGGTTGGGGCCAACCGGTA
TGGACCAAAGAAATGCCCATCGACTTGCCCGCACCCGTCTTGGATGCAGAGTCAGCACAATACGCACTCCTCACG
AAGAAGGTGAAGTGCTTCGACGGACGCAGGAGCTTGTCGATTCATTCCGTCGTTGTGCAAAGCGAGCGTCTCAAT
GAGTTCTTGAAAGAGGCAATGAAGGGTTATCCTAGTGTCGCCCTGACCTTGGACCGCCCCGAATTCTGCTCGCCT
TTCCGGGCTTTCGTTCATCGATGGGAAGAAATCACCAAACTGCGGGACGAAGTGCAGGATCCAACAACCAAGGCC
CATGTCGACATGTTCTACCGCATCATGGACGAGGAGCTCAGGGATGTCATCGACAGCAAGAATGAGCTGGTTGCC
AAAGGGGTCATCACTTTTGAGTTGGTTTGGACAATCATCAAACCGGACGATGTGATCCTTTCTTCGGCCAAGGAA
GGGCTCCGTGCTTATTCGTCCACACGCGGATCGTCGGACGGTGAAGGATCGCCAATTGATTATTTCCAAGCCGAA
TACGTCGAATTCGACGGAACCAAGTTCGGATACAACACCACGGATTTCATGATCCCCCGATTTGAAGGCGCTATG
CCAATCACCTCGTTGACTATCTTCCCGCTCAAATTACACCCCGCGAAGGAGGCGGTCCAGGAAATGTTGACTGCA
CGAGGCAAGAAGTGGGAAGCCCTCAAGGGGTACCATTTCAGATCCTATGATTCTTCAACCAGCACCAACTCCAAG
GGTCATGTCAAGAATCGCGTCATCATTGACGCCCAGGCATACAACAAGTTTGCGCACCACAAGACAATCAACTTT
GATAGGGAGATTGGTGAAGAACTGGATGATGCTCAGCGCCTCATTGCAACCCCAATGCTCAACGGATATGCCCTG
AATGACAAAAAATGGCGTTCGTTCCACGTGGATCATGTGCAAGACATTGATTGGGATGAGCAGGCTTTTGAGTCA
CTGGTCCTACCGCGGGAGCAGCAGGGGTTCAAGGACGTCATCTTGGCCGTCGCAAAGGCCCAGTCCCAGAAAAAG
GATACATTTGACGACGTCATTCGGGGCAAAGGCCAGGGGTTCATTGTCCAGCTCAGCGGTCCTCCAGGTGTCGGA
AAGACCCTGACTGCGGAAAGCGTTGCTGAGGTCATGAGGGTTCCTATTTATGTTATGAGTGCTGGCGACCTTGGA
GTCGAAGCCAAACGCTTCGAGTCAAAGTTGAAAGACATCTTGGAGCTGGTTCCCAAGTGGGGTGCTATTCTGTTG
CTTGATGAAGCTGATGTCTTCATGGAAGCCCGCGATTCCGCCAATCTCGATCGCAATGAACTTGTCTCGCTCTTC
TTGAGAACTCTTGAATACTACGAGGGTATTCTCTTCTTGACCACCAACCGTACGCAGAACATCGACCCTGCCTTC
GATTCTCGCGTCCACCTTTCCATCGCCTACAAGGATCTCGATGCGGAATCCAGGCGCCAGGTTTGGGGACAGTTC
CTCAGCCGCTCGATGAACATTGAAGCCATCACGGATGAGCAACTTGACCAGGTGGCCAAGTTGCAATTGAACGGT
CGCCAGATCAAAAATATCATCAAGACCGCTGGTCTTCTGGCTTGTTCCAAGGAGCGTGAGATCCGATTTGACGAT
TTGCAGACGGTGCTTGCTCTGAGAAATTTGCAGAAGTGA
Transcript >Pro_DTO377G3_2|g3715.t1
ATGAAGATCGAAATCTATGATGGAGTTGGTGCTGTCGATGATAGCATCACAGAACCCGAGGTCCAAGAAATCCAG
TATGAGCCTGAGGGTACCCTCTGTGATGTCCGCACCCTCTACCAGAAAAGTTCCGATGGTTGGGGCCAACCGGTA
TGGACCAAAGAAATGCCCATCGACTTGCCCGCACCCGTCTTGGATGCAGAGTCAGCACAATACGCACTCCTCACG
AAGAAGGTGAAGTGCTTCGACGGACGCAGGAGCTTGTCGATTCATTCCGTCGTTGTGCAAAGCGAGCGTCTCAAT
GAGTTCTTGAAAGAGGCAATGAAGGGTTATCCTAGTGTCGCCCTGACCTTGGACCGCCCCGAATTCTGCTCGCCT
TTCCGGGCTTTCGTTCATCGATGGGAAGAAATCACCAAACTGCGGGACGAAGTGCAGGATCCAACAACCAAGGCC
CATGTCGACATGTTCTACCGCATCATGGACGAGGAGCTCAGGGATGTCATCGACAGCAAGAATGAGCTGGTTGCC
AAAGGGGTCATCACTTTTGAGTTGGTTTGGACAATCATCAAACCGGACGATGTGATCCTTTCTTCGGCCAAGGAA
GGGCTCCGTGCTTATTCGTCCACACGCGGATCGTCGGACGGTGAAGGATCGCCAATTGATTATTTCCAAGCCGAA
TACGTCGAATTCGACGGAACCAAGTTCGGATACAACACCACGGATTTCATGATCCCCCGATTTGAAGGCGCTATG
CCAATCACCTCGTTGACTATCTTCCCGCTCAAATTACACCCCGCGAAGGAGGCGGTCCAGGAAATGTTGACTGCA
CGAGGCAAGAAGTGGGAAGCCCTCAAGGGGTACCATTTCAGATCCTATGATTCTTCAACCAGCACCAACTCCAAG
GGTCATGTCAAGAATCGCGTCATCATTGACGCCCAGGCATACAACAAGTTTGCGCACCACAAGACAATCAACTTT
GATAGGGAGATTGGTGAAGAACTGGATGATGCTCAGCGCCTCATTGCAACCCCAATGCTCAACGGATATGCCCTG
AATGACAAAAAATGGCGTTCGTTCCACGTGGATCATGTGCAAGACATTGATTGGGATGAGCAGGCTTTTGAGTCA
CTGGTCCTACCGCGGGAGCAGCAGGGGTTCAAGGACGTCATCTTGGCCGTCGCAAAGGCCCAGTCCCAGAAAAAG
GATACATTTGACGACGTCATTCGGGGCAAAGGCCAGGGGTTCATTGTCCAGCTCAGCGGTCCTCCAGGTGTCGGA
AAGACCCTGACTGCGGAAAGCGTTGCTGAGGTCATGAGGGTTCCTATTTATGTTATGAGTGCTGGCGACCTTGGA
GTCGAAGCCAAACGCTTCGAGTCAAAGTTGAAAGACATCTTGGAGCTGGTTCCCAAGTGGGGTGCTATTCTGTTG
CTTGATGAAGCTGATGTCTTCATGGAAGCCCGCGATTCCGCCAATCTCGATCGCAATGAACTTGTCTCGCTCTTC
TTGAGAACTCTTGAATACTACGAGGGTATTCTCTTCTTGACCACCAACCGTACGCAGAACATCGACCCTGCCTTC
GATTCTCGCGTCCACCTTTCCATCGCCTACAAGGATCTCGATGCGGAATCCAGGCGCCAGGTTTGGGGACAGTTC
CTCAGCCGCTCGATGAACATTGAAGCCATCACGGATGAGCAACTTGACCAGGTGGCCAAGTTGCAATTGAACGGT
CGCCAGATCAAAAATATCATCAAGACCGCTGGTCTTCTGGCTTGTTCCAAGGAGCGTGAGATCCGATTTGACGAT
TTGCAGACGGTGCTTGCTCTGAGAAATTTGCAGAAGTGA
Gene >Pro_DTO377G3_2|g3715.t1
ATGAAGATCGAAATCTATGATGGAGTTGGTGGTAAGTCTATATTCCTTCTGACATTTGACCTATCATTCACATGC
CAACGATCAAAGCTGTCGATGATAGCATCACAGAACCCGAGGTCCAAGAAATCCAGTATGAGCCTGAGGGTACCC
TCTGTGATGTCCGCACCCTCTACCAGAAAAGTTCCGATGGTTGGGGCCAACCGGTATGGACCAAAGAAATGCCCA
TCGACTTGCCCGCACCCGTCTTGGATGCAGAGTCAGCACAATACGCACTCCTCACGAAGAAGGTGAAGTGCTTCG
ACGGACGCAGGAGCTTGTCGATTCATTCCGTCGTTGTGCAAAGCGAGCGTCTCAATGAGTTCTTGAAAGAGGCAA
TGAAGGGTTATCCTAGTGTCGCCCTGACCTTGGACCGCCCCGAATTCTGCTCGCCTTTCCGGGCTTTCGTTCATC
GATGGGAAGAAATCACCAAACTGCGGGACGAAGTGCAGGATCCAACAACCAAGGCCCATGTCGACATGTTCTACC
GCATCATGGACGAGGAGCTCAGGGATGTCATCGACAGCAAGAATGAGCTGGTTGCCAAAGGGGTCATCACTTTTG
AGTTGGTTTGGACAATCATCAAACCGGACGATGTGATCCTTTCTTCGGCCAAGGAAGGGCTCCGTGCTTATTCGT
CCACACGCGGATCGTCGGACGGTGAAGGATCGCCAATTGATTATTTCCAAGCCGAATACGTCGAATTCGACGGAA
CCAAGTTCGGATACAACACCACGGATTTCATGATCCCCCGATTTGAAGGCGCTATGCCAATCACCTCGTTGACTA
TCTTCCCGCTCAAATTACACCCCGCGAAGGAGGCGGTCCAGGAAATGTTGACTGCACGAGGCAAGAAGTGGGAAG
CCCTCAAGGGGTACCATTTCAGATCCTATGATTCTTCAACCAGCACCAACTCCAAGGGTCATGTCAAGAATCGCG
TCATCATTGACGCCCAGGCATACAACAAGTTTGCGCACCACAAGACAATCAACTTTGATAGGGAGATTGGTGAAG
AACTGGATGATGCTCAGCGCCTCATTGCAACCCCAATGCTCAACGGATATGCCCTGAATGACAAAAAATGGCGTT
CGTTCCACGTGGATCATGTGCAAGACATTGATTGGGATGAGCAGGCTTTTGAGTCACTGGTCCTACCGCGGGAGC
AGCAGGGGTTCAAGGACGTCATCTTGGCCGTCGCAAAGGCCCAGTCCCAGAAAAAGGATACATTTGACGACGTCA
TTCGGGGCAAAGGCCAGGGGTTCATTGTCCAGCTCAGCGGTCCTCCAGGTGTCGGAAAGACCCTGACTGCGGAAA
GCGTTGCTGAGGTCATGAGGGTTCCTATTTATGTTATGAGTGCTGGCGACCTTGGAGTCGAAGCCAAACGCTTCG
AGTCAAAGTTGAAAGACATCTTGGAGCTGGTTCCCAAGTGGGGTGCTATTCTGTTGCTTGATGAAGCTGATGTCT
TCATGGAAGCCCGCGATTCCGCCAATCTCGATCGCAATGAACTTGTCTCGCTCTTCTTGAGAACTCTTGAATACT
ACGAGGTAAGCTCTGAATTTGGGCGAAGCGCACAAATGACATGATACTGATCTTTTATCTTTCTCTCCAGGGTAT
TCTCTTCTTGACCACCAACCGTACGCAGAACATCGACCCTGCCTTCGATTCTCGCGTCCACCTTTCCATCGCCTA
CAAGGATCTCGATGCGGAATCCAGGCGCCAGGTTTGGGGACAGTTCCTCAGCCGCTCGATGAACATTGAAGCCAT
CACGGATGAGCAACTTGACCAGGTGGCCAAGTTGCAATTGAACGGTCGCCAGATCAAAAATATCATCAAGACCGC
TGGTCTTCTGGCTTGTTCCAAGGAGCGTGAGATCCGATTTGACGATTTGCAGACGGTGCTTGCTCTGAGAAATTT
GCAGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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