Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3689.t1
Gene name
Locationscaffold_06:444341..445420
Strand-
Gene length (bp)1079
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 1.1E-03 9 33
PF00096 zf-C2H2 Zinc finger, C2H2 type 2.4E-04 39 63
PF00096 zf-C2H2 Zinc finger, C2H2 type 3.4E-04 69 93

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3689.t1
MAPGSGRDFNCSWEHCAKSFNRKSDLCRHYRIHTNERPYHCTVKDCNKSFIQRSALTVHSRTHTGEKPHVCDHEG
CQKAFSDSSSLARHRRIHTGKRPYICHEPTCERSFCRKTTLTKHQHRSHPPGSLTRPSSEDATSEHSYHQTPVPV
SGPGEQYMLGQQPYYPQSATPSHEYYSPQSVPMGSVPVHETAPPIVPQPVPGSSPVNMPHPQQPHPQHHAHPQHQ
HQQHQQQHQQYLQMMQQRYETSPRANYLPEQYQHPSFQGHQLPPEQPMMVSYHPNYAYKPPGSRLLNQAEGTDWG
FLGVG*
Coding >Pro_DTO377G3_2|g3689.t1
ATGGCTCCAGGCAGTGGGCGCGACTTTAACTGCTCGTGGGAGCATTGTGCGAAGTCCTTCAATCGCAAATCCGAT
CTCTGTCGCCATTATCGCATTCACACCAATGAGCGGCCGTATCATTGCACCGTAAAGGACTGCAACAAGAGCTTT
ATTCAGCGCAGTGCCTTGACCGTACACTCGAGGACCCACACTGGCGAGAAGCCTCATGTCTGTGACCATGAAGGC
TGTCAGAAGGCATTTTCAGATTCATCCAGTTTGGCCCGTCATCGCCGAATCCACACCGGCAAGCGACCATATATA
TGCCACGAGCCTACCTGCGAACGCAGTTTTTGTCGCAAGACCACCCTCACCAAACACCAACATCGCTCTCACCCC
CCGGGGAGCTTGACCCGACCATCCTCAGAAGATGCGACCTCCGAGCACTCGTACCACCAAACACCCGTGCCGGTC
TCGGGCCCAGGTGAGCAGTACATGCTCGGCCAGCAACCGTATTACCCGCAATCGGCGACGCCGAGCCATGAGTAT
TACTCGCCACAGAGTGTGCCGATGGGCTCCGTGCCGGTTCACGAAACTGCCCCTCCGATCGTGCCGCAGCCTGTA
CCTGGATCCTCGCCGGTAAACATGCCACACCCGCAACAGCCACACCCGCAGCACCATGCGCATCCGCAGCACCAG
CACCAGCAGCACCAGCAGCAACACCAACAATATCTACAGATGATGCAACAGCGTTACGAGACCAGCCCGCGCGCC
AACTACCTCCCAGAACAATACCAACACCCGTCTTTTCAAGGCCATCAACTGCCACCCGAACAACCAATGATGGTT
TCATACCACCCAAACTATGCGTACAAACCCCCAGGCTCCCGTCTCTTGAACCAAGCCGAAGGGACTGACTGGGGC
TTTTTGGGAGTAGGCTAA
Transcript >Pro_DTO377G3_2|g3689.t1
ATGGCTCCAGGCAGTGGGCGCGACTTTAACTGCTCGTGGGAGCATTGTGCGAAGTCCTTCAATCGCAAATCCGAT
CTCTGTCGCCATTATCGCATTCACACCAATGAGCGGCCGTATCATTGCACCGTAAAGGACTGCAACAAGAGCTTT
ATTCAGCGCAGTGCCTTGACCGTACACTCGAGGACCCACACTGGCGAGAAGCCTCATGTCTGTGACCATGAAGGC
TGTCAGAAGGCATTTTCAGATTCATCCAGTTTGGCCCGTCATCGCCGAATCCACACCGGCAAGCGACCATATATA
TGCCACGAGCCTACCTGCGAACGCAGTTTTTGTCGCAAGACCACCCTCACCAAACACCAACATCGCTCTCACCCC
CCGGGGAGCTTGACCCGACCATCCTCAGAAGATGCGACCTCCGAGCACTCGTACCACCAAACACCCGTGCCGGTC
TCGGGCCCAGGTGAGCAGTACATGCTCGGCCAGCAACCGTATTACCCGCAATCGGCGACGCCGAGCCATGAGTAT
TACTCGCCACAGAGTGTGCCGATGGGCTCCGTGCCGGTTCACGAAACTGCCCCTCCGATCGTGCCGCAGCCTGTA
CCTGGATCCTCGCCGGTAAACATGCCACACCCGCAACAGCCACACCCGCAGCACCATGCGCATCCGCAGCACCAG
CACCAGCAGCACCAGCAGCAACACCAACAATATCTACAGATGATGCAACAGCGTTACGAGACCAGCCCGCGCGCC
AACTACCTCCCAGAACAATACCAACACCCGTCTTTTCAAGGCCATCAACTGCCACCCGAACAACCAATGATGGTT
TCATACCACCCAAACTATGCGTACAAACCCCCAGGCTCCCGTCTCTTGAACCAAGCCGAAGGGACTGACTGGGGC
TTTTTGGGAGTAGGCTAA
Gene >Pro_DTO377G3_2|g3689.t1
ATGGCTCCAGGCAGTGGGCGCGACTTTAACTGCTCGTGGGAGCATTGTGCGAAGGTGGGTGTATCTCCGCGGGCT
CTACTCGTCATCCTCTAACCGGTTTAGTCCTTCAATCGCAAATCCGATCTCTGTCGCCATTATCGCATTCACACC
AATGAGCGGCCGTATCATTGCACCGTAAAGGACTGCAACAAGAGCTTTATTCAGCGCAGTGCCTTGACCGTACAC
TCGAGGACCCACACTGGCGAGAAGCCTCATGTCTGTGACCATGAAGGCTGTCAGAAGGCATTTTCAGATGTAAGG
GCTTGAATCTGTATGTGGCGCATTTACTCCATTTACTAATTTCTATAGTCATCCAGTTTGGCCCGTCATCGCCGA
ATCCACACCGGCAAGCGACCATATATATGCCACGAGCCTACCTGCGAACGCAGGTAAGTACTCTGCGTGGAAAGT
CGACAGCGCTATTCTAATTGTCTTGTTGAAACTGCAGTTTTTGTCGCAAGACCACCCTCACCAAACACCAACATC
GCTCTCACCCCCCGGGGAGCTTGACCCGACCATCCTCAGAAGATGCGACCTCCGAGCACTCGTACCACCAAACAC
CCGTGCCGGTCTCGGGCCCAGGTGAGCAGTACATGCTCGGCCAGCAACCGTATTACCCGCAATCGGCGACGCCGA
GCCATGAGTATTACTCGCCACAGAGTGTGCCGATGGGCTCCGTGCCGGTTCACGAAACTGCCCCTCCGATCGTGC
CGCAGCCTGTACCTGGATCCTCGCCGGTAAACATGCCACACCCGCAACAGCCACACCCGCAGCACCATGCGCATC
CGCAGCACCAGCACCAGCAGCACCAGCAGCAACACCAACAATATCTACAGATGATGCAACAGCGTTACGAGACCA
GCCCGCGCGCCAACTACCTCCCAGAACAATACCAACACCCGTCTTTTCAAGGCCATCAACTGCCACCCGAACAAC
CAATGATGGTTTCATACCACCCAAACTATGCGTACAAACCCCCAGGCTCCCGTCTCTTGAACCAAGCCGAAGGGA
CTGACTGGGGCTTTTTGGGAGTAGGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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