Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3678.t1
Gene name
Locationscaffold_06:402059..403185
Strand-
Gene length (bp)1126
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01040 UbiA UbiA prenyltransferase family 2.5E-15 36 115
PF01040 UbiA UbiA prenyltransferase family 3.8E-14 121 268

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.5

Transmembrane Domains

Domain # Start End Length
1 26 45 19
2 55 77 22
3 135 157 22
4 167 189 22
5 215 233 18
6 238 257 19
7 270 292 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3678.t1
MVGSMENPGSWDLACLLISTSRFNRYMPYYTMMAAVWSTLIAGALKLQEDPASLSVEYILFKAGLCFVHCLLLCG
AGNTWNDLIDRDIDARVERTKMRPLASGKVSTVEALVWMVEASSIMLYPYLKRPVFSRVFIYPQYILGLAVAYPS
ITGWASINGQEQSMSEIFTHCTPICLLIFFWCLYFNTAYSHQDSVDDRKMNINSAYVVAGQRIRLFLAFLGALPL
AVIPYVVLKINSPWLWFSWMAVWTVSIVMQIVRFDSKKLESGGRIHWENFLLGLWTTVACIVEVGLQKVEFWNLI
*
Coding >Pro_DTO377G3_2|g3678.t1
ATGGTTGGTTCAATGGAGAACCCTGGTTCATGGGACCTTGCCTGTCTTCTGATCAGCACCTCGCGGTTCAACCGA
TATATGCCCTACTACACGATGATGGCCGCTGTATGGTCTACCTTGATTGCTGGCGCTTTAAAGTTGCAAGAGGAT
CCCGCCAGTCTCTCTGTCGAGTACATCCTCTTCAAAGCCGGCCTGTGCTTTGTTCACTGCTTGTTACTATGCGGT
GCTGGGAACACATGGAACGACCTGATAGACCGTGATATTGACGCCAGGGTGGAAAGGACAAAAATGCGGCCGTTG
GCATCTGGAAAAGTCTCAACCGTCGAGGCCCTGGTATGGATGGTCGAAGCATCCAGTATCATGCTGTATCCCTAC
TTGAAACGACCCGTATTCAGCAGAGTCTTCATCTACCCCCAGTATATCCTTGGCTTGGCCGTCGCCTACCCATCG
ATAACAGGCTGGGCCTCAATCAACGGGCAAGAGCAGTCCATGTCTGAGATCTTCACACATTGCACCCCGATCTGC
CTTCTTATCTTCTTCTGGTGCCTCTATTTCAACACCGCCTACAGTCACCAGGACAGTGTCGACGACCGGAAGATG
AATATCAATTCTGCCTATGTGGTCGCGGGGCAACGCATCCGGTTATTCCTCGCCTTCCTGGGTGCTCTACCACTC
GCGGTGATTCCGTATGTTGTGTTGAAAATCAACTCTCCCTGGCTGTGGTTCTCTTGGATGGCGGTCTGGACCGTT
TCTATTGTGATGCAGATTGTTCGGTTCGATTCGAAGAAGCTTGAAAGTGGCGGGCGTATTCATTGGGAGAACTTT
CTGTTGGGACTGTGGACTACAGTTGCTTGCATAGTCGAGGTCGGTCTGCAGAAAGTAGAGTTCTGGAACCTAATC
TAG
Transcript >Pro_DTO377G3_2|g3678.t1
ATGGTTGGTTCAATGGAGAACCCTGGTTCATGGGACCTTGCCTGTCTTCTGATCAGCACCTCGCGGTTCAACCGA
TATATGCCCTACTACACGATGATGGCCGCTGTATGGTCTACCTTGATTGCTGGCGCTTTAAAGTTGCAAGAGGAT
CCCGCCAGTCTCTCTGTCGAGTACATCCTCTTCAAAGCCGGCCTGTGCTTTGTTCACTGCTTGTTACTATGCGGT
GCTGGGAACACATGGAACGACCTGATAGACCGTGATATTGACGCCAGGGTGGAAAGGACAAAAATGCGGCCGTTG
GCATCTGGAAAAGTCTCAACCGTCGAGGCCCTGGTATGGATGGTCGAAGCATCCAGTATCATGCTGTATCCCTAC
TTGAAACGACCCGTATTCAGCAGAGTCTTCATCTACCCCCAGTATATCCTTGGCTTGGCCGTCGCCTACCCATCG
ATAACAGGCTGGGCCTCAATCAACGGGCAAGAGCAGTCCATGTCTGAGATCTTCACACATTGCACCCCGATCTGC
CTTCTTATCTTCTTCTGGTGCCTCTATTTCAACACCGCCTACAGTCACCAGGACAGTGTCGACGACCGGAAGATG
AATATCAATTCTGCCTATGTGGTCGCGGGGCAACGCATCCGGTTATTCCTCGCCTTCCTGGGTGCTCTACCACTC
GCGGTGATTCCGTATGTTGTGTTGAAAATCAACTCTCCCTGGCTGTGGTTCTCTTGGATGGCGGTCTGGACCGTT
TCTATTGTGATGCAGATTGTTCGGTTCGATTCGAAGAAGCTTGAAAGTGGCGGGCGTATTCATTGGGAGAACTTT
CTGTTGGGACTGTGGACTACAGTTGCTTGCATAGTCGAGGTCGGTCTGCAGAAAGTAGAGTTCTGGAACCTAATC
TAG
Gene >Pro_DTO377G3_2|g3678.t1
ATGGTTGGTTCAATGGAGAACCCTGGTTCATGGGACCTTGCCTGTCTTCTGATCAGCACCTCGCGGTTCAACCGA
TATATGCCCTACTACACGATGATGGCCGCTGGTAAGGAGAGCACCATTCCAAGCTCTCTCATGAATAAAGTATTA
ACTTGAAATCTCCGTGACAAAACAGTATGGTCTACCTTGATTGCTGGCGCTTTAAAGTTGCAAGAGGATCCCGCC
AGTCTCTCTGTCGAGTACATCCTCTTCAAAGCCGGCCTGTGCTTTGTTCACTGCTTGTTACTATGCGGTGCTGGG
AACACATGGAACGACCTGATAGACCGTGATATTGACGCCAGGGTGGAAAGGACAAAAATGCGGCCGTTGGCATCT
GGAAAAGTCTCAACCGTCGAGGCCCTGGTATGGATGGTCGGTCAGTATTTTCTGTCGGTGAAAATGCTGGACTTA
ATATTGGATAACAGAAGCATGTAAGTCTGACATTCAGTGTGATAAAACTCCGGCCGCATGGAAGAGCACAACTTG
ATTAACCCCGTCCATCCCTCTTAGATGGGGCTTAATGCTGCCTTTGACAGCCAGTATCATGCTGTATCCCTACTT
GAAACGACCCGTATTCAGCAGAGTCTTCATCTACCCCCAGTATATCCTTGGCTTGGCCGTCGCCTACCCATCGAT
AACAGGCTGGGCCTCAATCAACGGGCAAGAGCAGTCCATGTCTGAGATCTTCACACATTGCACCCCGATCTGCCT
TCTTATCTTCTTCTGGTGCCTCTATTTCAACACCGCCTACAGTCACCAGGACAGTGTCGACGACCGGAAGATGAA
TATCAATTCTGCCTATGTGGTCGCGGGGCAACGCATCCGGTTATTCCTCGCCTTCCTGGGTGCTCTACCACTCGC
GGTGATTCCGTATGTTGTGTTGAAAATCAACTCTCCCTGGCTGTGGTTCTCTTGGATGGCGGTCTGGACCGTTTC
TATTGTGATGCAGATTGTTCGGTTCGATTCGAAGAAGCTTGAAAGTGGCGGGCGTATTCATTGGGAGAACTTTCT
GTTGGGACTGTGGACTACAGTTGCTTGCATAGTCGAGGTCGGTCTGCAGAAAGTAGAGTTCTGGAACCTAATCTA
G

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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