Protein ID | Pro_DTO377G3_2|g3677.t1 |
Gene name | |
Location | scaffold_06:400275..401001 |
Strand | + |
Gene length (bp) | 726 |
Transcript length (bp) | 726 |
Coding sequence length (bp) | 726 |
Protein length (aa) | 242 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.7E-13 | 4 | 96 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 5.8E-09 | 69 | 129 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.0E-09 | 102 | 162 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.0E-09 | 135 | 195 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 2.0E-05 | 39 | 79 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 3.2E-06 | 69 | 112 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 3.7E-07 | 102 | 153 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 7.3E-07 | 135 | 186 |
PF13606 | Ank_3 | Ankyrin repeat | 3.5E-04 | 135 | 161 |
PF13606 | Ank_3 | Ankyrin repeat | 3.6E-04 | 168 | 194 |
PF00023 | Ank | Ankyrin repeat | 4.6E-03 | 1 | 31 |
PF00023 | Ank | Ankyrin repeat | 2.7E-03 | 34 | 63 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3677.t1 MSALHLAAFNGHEQEVHLILGGDESDVNTPDDTGIYPVIWASLNGHDRTVELLLDRGADVNAQGGYHGNALQAAC AKGHDKIAQILLERGADVNAQGSEYGNALQAACAKGHDKIAQILLERGADVNAQGSEYGNALQAACSSGHDTIAQ MLLERGADVNAQGGYHGNALQAACSSGHDTIAQMLLERGADVNAQGGVYGNTPQAARRGGQHSIVKLLQGQHCPD QSTSQPPPSKRLKVSS* |
Coding | >Pro_DTO377G3_2|g3677.t1 ATGAGTGCACTACATCTGGCAGCATTCAATGGCCATGAACAGGAGGTACATTTAATACTTGGTGGGGATGAAAGT GATGTCAATACACCTGATGATACAGGAATATACCCGGTCATATGGGCTTCATTGAATGGACATGATAGGACTGTG GAACTTCTGCTAGATCGAGGAGCCGATGTCAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGT GCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGGGGAGCCGATGTTAACGCTCAGGGTAGTGAATAC GGAAATGCCCTCCAGGCTGCTTGTGCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGAGGAGCCGAT GTTAACGCTCAGGGTAGTGAATACGGAAATGCCCTCCAGGCTGCTTGCTCTAGTGGACACGATACAATCGCACAG ATGCTGCTAGAGCGGGGAGCCGATGTTAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGCTCT AGTGGACACGATACAATCGCACAGATGCTGCTAGAGCGAGGAGCCGATGTCAACGCCCAGGGTGGAGTATACGGA AATACTCCCCAAGCGGCTCGTCGAGGAGGGCAACACAGTATAGTGAAACTTCTCCAAGGACAGCATTGTCCTGAT CAGTCGACCTCCCAACCTCCCCCTTCCAAAAGGCTCAAGGTTTCATCATGA |
Transcript | >Pro_DTO377G3_2|g3677.t1 ATGAGTGCACTACATCTGGCAGCATTCAATGGCCATGAACAGGAGGTACATTTAATACTTGGTGGGGATGAAAGT GATGTCAATACACCTGATGATACAGGAATATACCCGGTCATATGGGCTTCATTGAATGGACATGATAGGACTGTG GAACTTCTGCTAGATCGAGGAGCCGATGTCAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGT GCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGGGGAGCCGATGTTAACGCTCAGGGTAGTGAATAC GGAAATGCCCTCCAGGCTGCTTGTGCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGAGGAGCCGAT GTTAACGCTCAGGGTAGTGAATACGGAAATGCCCTCCAGGCTGCTTGCTCTAGTGGACACGATACAATCGCACAG ATGCTGCTAGAGCGGGGAGCCGATGTTAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGCTCT AGTGGACACGATACAATCGCACAGATGCTGCTAGAGCGAGGAGCCGATGTCAACGCCCAGGGTGGAGTATACGGA AATACTCCCCAAGCGGCTCGTCGAGGAGGGCAACACAGTATAGTGAAACTTCTCCAAGGACAGCATTGTCCTGAT CAGTCGACCTCCCAACCTCCCCCTTCCAAAAGGCTCAAGGTTTCATCATGA |
Gene | >Pro_DTO377G3_2|g3677.t1 ATGAGTGCACTACATCTGGCAGCATTCAATGGCCATGAACAGGAGGTACATTTAATACTTGGTGGGGATGAAAGT GATGTCAATACACCTGATGATACAGGAATATACCCGGTCATATGGGCTTCATTGAATGGACATGATAGGACTGTG GAACTTCTGCTAGATCGAGGAGCCGATGTCAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGT GCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGGGGAGCCGATGTTAACGCTCAGGGTAGTGAATAC GGAAATGCCCTCCAGGCTGCTTGTGCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGAGGAGCCGAT GTTAACGCTCAGGGTAGTGAATACGGAAATGCCCTCCAGGCTGCTTGCTCTAGTGGACACGATACAATCGCACAG ATGCTGCTAGAGCGGGGAGCCGATGTTAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGCTCT AGTGGACACGATACAATCGCACAGATGCTGCTAGAGCGAGGAGCCGATGTCAACGCCCAGGGTGGAGTATACGGA AATACTCCCCAAGCGGCTCGTCGAGGAGGGCAACACAGTATAGTGAAACTTCTCCAAGGACAGCATTGTCCTGAT CAGTCGACCTCCCAACCTCCCCCTTCCAAAAGGCTCAAGGTTTCATCATGA |