Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3677.t1
Gene name
Locationscaffold_06:400275..401001
Strand+
Gene length (bp)726
Transcript length (bp)726
Coding sequence length (bp)726
Protein length (aa) 242

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12796 Ank_2 Ankyrin repeats (3 copies) 2.7E-13 4 96
PF12796 Ank_2 Ankyrin repeats (3 copies) 5.8E-09 69 129
PF12796 Ank_2 Ankyrin repeats (3 copies) 2.0E-09 102 162
PF12796 Ank_2 Ankyrin repeats (3 copies) 2.0E-09 135 195
PF13637 Ank_4 Ankyrin repeats (many copies) 2.0E-05 39 79
PF13637 Ank_4 Ankyrin repeats (many copies) 3.2E-06 69 112
PF13637 Ank_4 Ankyrin repeats (many copies) 3.7E-07 102 153
PF13637 Ank_4 Ankyrin repeats (many copies) 7.3E-07 135 186
PF13606 Ank_3 Ankyrin repeat 3.5E-04 135 161
PF13606 Ank_3 Ankyrin repeat 3.6E-04 168 194
PF00023 Ank Ankyrin repeat 4.6E-03 1 31
PF00023 Ank Ankyrin repeat 2.7E-03 34 63

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3677.t1
MSALHLAAFNGHEQEVHLILGGDESDVNTPDDTGIYPVIWASLNGHDRTVELLLDRGADVNAQGGYHGNALQAAC
AKGHDKIAQILLERGADVNAQGSEYGNALQAACAKGHDKIAQILLERGADVNAQGSEYGNALQAACSSGHDTIAQ
MLLERGADVNAQGGYHGNALQAACSSGHDTIAQMLLERGADVNAQGGVYGNTPQAARRGGQHSIVKLLQGQHCPD
QSTSQPPPSKRLKVSS*
Coding >Pro_DTO377G3_2|g3677.t1
ATGAGTGCACTACATCTGGCAGCATTCAATGGCCATGAACAGGAGGTACATTTAATACTTGGTGGGGATGAAAGT
GATGTCAATACACCTGATGATACAGGAATATACCCGGTCATATGGGCTTCATTGAATGGACATGATAGGACTGTG
GAACTTCTGCTAGATCGAGGAGCCGATGTCAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGT
GCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGGGGAGCCGATGTTAACGCTCAGGGTAGTGAATAC
GGAAATGCCCTCCAGGCTGCTTGTGCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGAGGAGCCGAT
GTTAACGCTCAGGGTAGTGAATACGGAAATGCCCTCCAGGCTGCTTGCTCTAGTGGACACGATACAATCGCACAG
ATGCTGCTAGAGCGGGGAGCCGATGTTAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGCTCT
AGTGGACACGATACAATCGCACAGATGCTGCTAGAGCGAGGAGCCGATGTCAACGCCCAGGGTGGAGTATACGGA
AATACTCCCCAAGCGGCTCGTCGAGGAGGGCAACACAGTATAGTGAAACTTCTCCAAGGACAGCATTGTCCTGAT
CAGTCGACCTCCCAACCTCCCCCTTCCAAAAGGCTCAAGGTTTCATCATGA
Transcript >Pro_DTO377G3_2|g3677.t1
ATGAGTGCACTACATCTGGCAGCATTCAATGGCCATGAACAGGAGGTACATTTAATACTTGGTGGGGATGAAAGT
GATGTCAATACACCTGATGATACAGGAATATACCCGGTCATATGGGCTTCATTGAATGGACATGATAGGACTGTG
GAACTTCTGCTAGATCGAGGAGCCGATGTCAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGT
GCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGGGGAGCCGATGTTAACGCTCAGGGTAGTGAATAC
GGAAATGCCCTCCAGGCTGCTTGTGCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGAGGAGCCGAT
GTTAACGCTCAGGGTAGTGAATACGGAAATGCCCTCCAGGCTGCTTGCTCTAGTGGACACGATACAATCGCACAG
ATGCTGCTAGAGCGGGGAGCCGATGTTAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGCTCT
AGTGGACACGATACAATCGCACAGATGCTGCTAGAGCGAGGAGCCGATGTCAACGCCCAGGGTGGAGTATACGGA
AATACTCCCCAAGCGGCTCGTCGAGGAGGGCAACACAGTATAGTGAAACTTCTCCAAGGACAGCATTGTCCTGAT
CAGTCGACCTCCCAACCTCCCCCTTCCAAAAGGCTCAAGGTTTCATCATGA
Gene >Pro_DTO377G3_2|g3677.t1
ATGAGTGCACTACATCTGGCAGCATTCAATGGCCATGAACAGGAGGTACATTTAATACTTGGTGGGGATGAAAGT
GATGTCAATACACCTGATGATACAGGAATATACCCGGTCATATGGGCTTCATTGAATGGACATGATAGGACTGTG
GAACTTCTGCTAGATCGAGGAGCCGATGTCAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGT
GCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGGGGAGCCGATGTTAACGCTCAGGGTAGTGAATAC
GGAAATGCCCTCCAGGCTGCTTGTGCTAAAGGACACGATAAGATCGCACAGATACTGCTAGAGCGAGGAGCCGAT
GTTAACGCTCAGGGTAGTGAATACGGAAATGCCCTCCAGGCTGCTTGCTCTAGTGGACACGATACAATCGCACAG
ATGCTGCTAGAGCGGGGAGCCGATGTTAACGCCCAGGGTGGATACCACGGAAATGCCCTCCAGGCTGCTTGCTCT
AGTGGACACGATACAATCGCACAGATGCTGCTAGAGCGAGGAGCCGATGTCAACGCCCAGGGTGGAGTATACGGA
AATACTCCCCAAGCGGCTCGTCGAGGAGGGCAACACAGTATAGTGAAACTTCTCCAAGGACAGCATTGTCCTGAT
CAGTCGACCTCCCAACCTCCCCCTTCCAAAAGGCTCAAGGTTTCATCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail