Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3650.t1
Gene name
Locationscaffold_06:324485..325183
Strand+
Gene length (bp)698
Transcript length (bp)363
Coding sequence length (bp)363
Protein length (aa) 121

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01920 Prefoldin_2 Prefoldin subunit 6.4E-18 13 116

GO

GO Term Description Terminal node
GO:0016272 prefoldin complex Yes
GO:0051082 unfolded protein binding Yes
GO:0006457 protein folding Yes
GO:0005515 protein binding No
GO:0008150 biological_process No
GO:0032991 protein-containing complex No
GO:0005488 binding No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3650.t1
MSIPNEALQKLFQEIETRAISSQQQISITKAHMTAKQRDIRMLQLTSKELSELPSDTNVYEGVGKMFVNVPVGIV
NKRLVRESGEATAEISNLEKKLQYHETTNQKSRENLEQILKSGRA*
Coding >Pro_DTO377G3_2|g3650.t1
ATGTCGATTCCCAACGAAGCTCTCCAGAAGCTCTTCCAGGAGATTGAGACCCGTGCGATCTCCTCGCAGCAGCAG
ATCAGTATCACCAAGGCTCATATGACGGCCAAGCAGCGCGATATCCGCATGCTACAGCTTACATCGAAGGAGTTG
TCTGAGTTGCCTTCTGATACGAATGTTTACGAGGGTGTCGGGAAAATGTTCGTCAACGTTCCCGTCGGCATAGTC
AACAAGCGTCTTGTGCGCGAGAGTGGCGAGGCCACCGCTGAGATCTCCAACCTCGAGAAGAAGCTGCAATATCAC
GAGACGACGAACCAGAAGAGTCGTGAGAACTTGGAGCAGATTCTCAAGTCTGGGAGGGCGTGA
Transcript >Pro_DTO377G3_2|g3650.t1
ATGTCGATTCCCAACGAAGCTCTCCAGAAGCTCTTCCAGGAGATTGAGACCCGTGCGATCTCCTCGCAGCAGCAG
ATCAGTATCACCAAGGCTCATATGACGGCCAAGCAGCGCGATATCCGCATGCTACAGCTTACATCGAAGGAGTTG
TCTGAGTTGCCTTCTGATACGAATGTTTACGAGGGTGTCGGGAAAATGTTCGTCAACGTTCCCGTCGGCATAGTC
AACAAGCGTCTTGTGCGCGAGAGTGGCGAGGCCACCGCTGAGATCTCCAACCTCGAGAAGAAGCTGCAATATCAC
GAGACGACGAACCAGAAGAGTCGTGAGAACTTGGAGCAGATTCTCAAGTCTGGGAGGGCGTGA
Gene >Pro_DTO377G3_2|g3650.t1
ATGTCGATTCCCAACGAAGCTCTCCAGAAGGTGTGTCTTAGACTGAATCATTTTACATATTTGTGTGGGATACCG
CGAGCAGATGGTCATGGGAAGCGGTGTGCCAAGCCAATTCGGTCTCACTCAGCCTCTTGTCTCTGTTTCCGGTTG
AGGACGTCAATTCCAATAAAGACAAGCAAATGCTAATGGCTCTAAACAACTACAGCTCTTCCAGGAGATTGAGAC
CCGTGCGATCTCCTCGCAGCAGCAGATCAGTATCACCAAGGCTCATATGACGGCCAAGCAGCGCGATATCCGCAT
GCTACAGCTTACATCGAAGGAGTTGTCTGAGTTGCCTTCTGATACGAATGTTTACGAGGGTGTCGGGAAAATGTG
AGCTTTTGTTTTCTCTTTCCTATCCTGGCTTCTTGTTTCTTATCACATTTCTTTTCCTGTTTTCAATTTCGCAAC
CCCGAAACTGTGAGACAGTCGGCGAGATCACTCATTCGCCCCTTTTCTCGTGAAATGAAACTGACTTATCGCCCT
GTTCTAGGTTCGTCAACGTTCCCGTCGGCATAGTCAACAAGCGTCTTGTGCGCGAGAGTGGCGAGGCCACCGCTG
AGATCTCCAACCTCGAGAAGAAGCTGCAATATCACGAGACGACGAACCAGAAGAGTCGTGAGAACTTGGAGCAGA
TTCTCAAGTCTGGGAGGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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