Protein ID | Pro_DTO377G3_2|g3648.t1 |
Gene name | |
Location | scaffold_06:309725..312545 |
Strand | + |
Gene length (bp) | 2820 |
Transcript length (bp) | 2529 |
Coding sequence length (bp) | 2529 |
Protein length (aa) | 843 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00628 | PHD | PHD-finger | 1.8E-08 | 435 | 488 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 51 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 25.29 | 14.93 | 35.64 |
5d_25C | Five days - 25 degrees Celsius | 22.94 | 13.39 | 32.49 |
7d_25C | Seven days - 25 degrees Celsius | 25.37 | 14.94 | 35.79 |
10d_25C | Ten days - 25 degrees Celsius | 22.99 | 13.39 | 32.59 |
7d_15C | Seven days - 15 degrees Celsius | 22.23 | 12.91 | 31.55 |
7d_30C | Seven days - 30 degrees Celsius | 20.77 | 11.92 | 29.63 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.751949 | no |
3d_25C | 7d_25C | 0.993328 | no |
3d_25C | 7d_15C | 0.660197 | no |
3d_25C | 7d_30C | 0.466624 | no |
3d_25C | 10d_25C | 0.755433 | no |
5d_25C | 7d_25C | 0.745175 | no |
5d_25C | 7d_15C | 0.932348 | no |
5d_25C | 7d_30C | 0.759333 | no |
5d_25C | 10d_25C | 0.995243 | no |
7d_25C | 7d_15C | 0.652197 | no |
7d_25C | 7d_30C | 0.460421 | no |
7d_25C | 10d_25C | 0.749850 | no |
7d_15C | 7d_30C | 0.843944 | no |
7d_15C | 10d_25C | 0.924942 | no |
7d_30C | 10d_25C | 0.750540 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3648.t1 MGSRKRTHSEVASVAEQQVPEEPGLLSQLRSNWAFASLMQYIAIFGQVMKIDEDFGIEDLEVECLKPEPSHKLLE IGLCLLKWISSHRGLTFDNFDEYTRRQYNAKAPNITNPFGYDEEPNKFLYFDVFTKIRVLHQLTVWTFWNADRIR DKMPEKKETEQTEWRIEEFGWDREGRSYYVLDDNRLYRRTDPPPPPPPQRPKKKAKSRSSRVSRTSKRTSTAAAE EGSDEESKDTNDAAVAAFSKDPFKWECVAVTLQEYQAFLETIQKTKDADEKYLRDSIVEHVLPILEKAEEAQQRK RQKREKELLNMQLVAGAKRSSRLAAKEEKERQDREAAEAAQKRENDLAEARKEQARQSQLEEDRQSRTMTREHRI RDREQKRLLHEAELERIAEEQERIDRGESRVSARNLQADLEKSQKNLAGLTQDDQWIFDCSGCGVYGENLDDGSH SVACEKCNVWQHSKCLGISQEAAEKEDFHFVCRDCKQKEEDSIKPKLPPLRFRVSASASPSAAPPVGKKLKLEDD EDRAPPSPVKKSHLALSNIQNEPSRTQPTLHSSAVSHGNFYPPASPQRRLHNTDHTSLPSSSPPRPPVSPPKGMN GLLHTTEQHARPSSSQHSFPPRQSAPQLPPVGSFPVRPSSSHSAQSPVQNQPSMSPTQGNPEVGPIAGFPSVSSH TSPWSSFETPRPQSGHTATPSMSHHYPSFSATTPNGNHSSPPQSSHGMAMSGISPTKQSPRPLTGSSMAGAPVLP PIRRLEPSPKLMGRSSPDAPIPPPVKCMTPEQEERRLRENASMLHQSHHYQSNGQHLMSSPSLSRIPPLASGTSQ YPDPVPSPRRESNGQNQ* |
Coding | >Pro_DTO377G3_2|g3648.t1 ATGGGATCGCGAAAGCGCACCCACTCCGAGGTCGCCTCGGTGGCCGAGCAACAGGTACCAGAAGAGCCTGGTTTG CTTTCACAGCTCAGGAGCAACTGGGCATTTGCAAGCCTCATGCAATACATTGCTATCTTTGGCCAGGTCATGAAG ATTGACGAGGACTTTGGGATTGAGGATCTAGAAGTCGAATGTCTCAAACCCGAGCCCTCTCATAAACTACTGGAG ATTGGATTGTGTCTCCTCAAGTGGATTTCGTCGCATCGCGGTCTTACATTCGACAATTTCGATGAATACACCCGA CGCCAGTACAATGCGAAAGCACCTAATATCACTAATCCCTTCGGTTACGATGAAGAACCAAACAAGTTCCTGTAT TTCGATGTTTTCACCAAGATCCGTGTCCTCCACCAGCTGACGGTATGGACATTCTGGAACGCGGACCGCATTCGC GACAAGATGCCCGAAAAGAAGGAAACCGAGCAGACAGAATGGCGTATTGAAGAGTTTGGCTGGGATCGCGAAGGG CGATCATACTACGTGCTAGATGACAATCGCCTCTACCGTCGCACCGACCCTCCTCCACCTCCCCCTCCTCAGCGT CCCAAGAAGAAGGCAAAGAGCCGGTCTTCTCGAGTATCAAGAACGTCAAAGCGTACATCTACGGCAGCGGCGGAA GAGGGTTCCGACGAGGAAAGCAAGGATACCAACGATGCAGCCGTCGCGGCCTTCTCTAAAGATCCTTTCAAGTGG GAATGTGTGGCTGTCACACTCCAGGAATACCAGGCTTTCTTGGAGACAATCCAGAAAACCAAGGACGCGGACGAG AAATACCTACGCGATAGCATAGTTGAGCATGTCCTGCCTATCCTCGAGAAGGCAGAGGAAGCGCAGCAGCGCAAG CGTCAGAAGCGTGAAAAGGAGCTTCTGAATATGCAGCTTGTCGCCGGTGCTAAGAGATCTAGTCGACTTGCCGCC AAGGAAGAAAAAGAACGACAGGATCGAGAGGCTGCCGAAGCCGCCCAGAAGCGTGAAAACGACCTAGCCGAGGCT CGTAAGGAGCAGGCAAGGCAAAGTCAGCTTGAAGAAGATCGACAGTCGCGTACAATGACTCGCGAGCACCGCATC AGAGACCGTGAACAGAAGCGACTGCTGCATGAGGCTGAGCTGGAAAGGATCGCCGAAGAACAAGAAAGAATTGAC AGGGGTGAAAGTAGGGTGTCTGCCCGAAACCTCCAGGCTGACCTGGAGAAGTCCCAGAAGAACCTGGCAGGGCTT ACCCAAGATGATCAGTGGATCTTTGATTGCTCTGGCTGTGGAGTGTATGGCGAGAACTTGGATGATGGAAGTCAC AGTGTTGCCTGCGAAAAATGCAATGTTTGGCAGCATAGCAAGTGTCTTGGGATCTCACAGGAAGCGGCCGAAAAG GAAGACTTTCACTTTGTCTGCCGAGACTGCAAGCAAAAAGAGGAAGATTCCATCAAGCCCAAACTCCCACCACTC AGATTCCGGGTCAGCGCCTCAGCATCTCCTTCGGCTGCTCCTCCAGTCGGTAAGAAGCTGAAATTAGAGGATGAC GAAGATCGTGCTCCGCCCTCGCCTGTGAAGAAATCGCATCTGGCTCTATCTAATATTCAAAACGAACCCTCAAGA ACACAACCCACTCTACACTCGTCTGCTGTTAGTCATGGCAACTTCTATCCTCCTGCGTCTCCCCAGCGCCGGCTC CATAACACAGATCACACTTCCCTTCCATCTTCAAGCCCTCCTCGTCCACCAGTTTCCCCGCCAAAGGGCATGAAT GGCTTGCTGCATACCACCGAGCAGCACGCGCGGCCATCCTCCTCTCAGCACTCCTTCCCGCCTAGGCAATCAGCT CCTCAACTTCCGCCCGTTGGATCGTTCCCTGTGCGGCCCTCCTCCTCTCACTCTGCCCAAAGTCCTGTTCAAAAC CAACCATCTATGTCACCAACCCAGGGCAACCCTGAGGTTGGCCCTATTGCCGGCTTCCCGTCTGTTTCAAGCCAT ACATCTCCGTGGAGTTCTTTCGAGACTCCGCGTCCGCAATCAGGTCATACAGCTACTCCGTCGATGTCTCACCAC TATCCATCTTTCTCTGCCACGACGCCCAACGGTAACCACTCTTCGCCTCCTCAGAGTTCTCACGGCATGGCTATG TCGGGAATTAGCCCGACCAAACAGTCACCTCGTCCGCTTACTGGCAGTAGCATGGCAGGCGCACCAGTCCTGCCG CCCATCCGCAGACTGGAGCCGAGCCCAAAGCTCATGGGCCGCAGCTCCCCAGATGCTCCGATCCCCCCGCCTGTC AAGTGCATGACACCTGAGCAGGAGGAACGCCGGCTGAGAGAGAATGCTTCAATGCTACACCAGAGCCACCACTAC CAGAGCAATGGACAGCATCTGATGTCGTCACCATCGCTGAGTCGCATTCCTCCCTTGGCCTCCGGGACGTCCCAG TACCCGGATCCTGTTCCTTCGCCTCGGCGTGAAAGCAATGGCCAAAACCAATGA |
Transcript | >Pro_DTO377G3_2|g3648.t1 ATGGGATCGCGAAAGCGCACCCACTCCGAGGTCGCCTCGGTGGCCGAGCAACAGGTACCAGAAGAGCCTGGTTTG CTTTCACAGCTCAGGAGCAACTGGGCATTTGCAAGCCTCATGCAATACATTGCTATCTTTGGCCAGGTCATGAAG ATTGACGAGGACTTTGGGATTGAGGATCTAGAAGTCGAATGTCTCAAACCCGAGCCCTCTCATAAACTACTGGAG ATTGGATTGTGTCTCCTCAAGTGGATTTCGTCGCATCGCGGTCTTACATTCGACAATTTCGATGAATACACCCGA CGCCAGTACAATGCGAAAGCACCTAATATCACTAATCCCTTCGGTTACGATGAAGAACCAAACAAGTTCCTGTAT TTCGATGTTTTCACCAAGATCCGTGTCCTCCACCAGCTGACGGTATGGACATTCTGGAACGCGGACCGCATTCGC GACAAGATGCCCGAAAAGAAGGAAACCGAGCAGACAGAATGGCGTATTGAAGAGTTTGGCTGGGATCGCGAAGGG CGATCATACTACGTGCTAGATGACAATCGCCTCTACCGTCGCACCGACCCTCCTCCACCTCCCCCTCCTCAGCGT CCCAAGAAGAAGGCAAAGAGCCGGTCTTCTCGAGTATCAAGAACGTCAAAGCGTACATCTACGGCAGCGGCGGAA GAGGGTTCCGACGAGGAAAGCAAGGATACCAACGATGCAGCCGTCGCGGCCTTCTCTAAAGATCCTTTCAAGTGG GAATGTGTGGCTGTCACACTCCAGGAATACCAGGCTTTCTTGGAGACAATCCAGAAAACCAAGGACGCGGACGAG AAATACCTACGCGATAGCATAGTTGAGCATGTCCTGCCTATCCTCGAGAAGGCAGAGGAAGCGCAGCAGCGCAAG CGTCAGAAGCGTGAAAAGGAGCTTCTGAATATGCAGCTTGTCGCCGGTGCTAAGAGATCTAGTCGACTTGCCGCC AAGGAAGAAAAAGAACGACAGGATCGAGAGGCTGCCGAAGCCGCCCAGAAGCGTGAAAACGACCTAGCCGAGGCT CGTAAGGAGCAGGCAAGGCAAAGTCAGCTTGAAGAAGATCGACAGTCGCGTACAATGACTCGCGAGCACCGCATC AGAGACCGTGAACAGAAGCGACTGCTGCATGAGGCTGAGCTGGAAAGGATCGCCGAAGAACAAGAAAGAATTGAC AGGGGTGAAAGTAGGGTGTCTGCCCGAAACCTCCAGGCTGACCTGGAGAAGTCCCAGAAGAACCTGGCAGGGCTT ACCCAAGATGATCAGTGGATCTTTGATTGCTCTGGCTGTGGAGTGTATGGCGAGAACTTGGATGATGGAAGTCAC AGTGTTGCCTGCGAAAAATGCAATGTTTGGCAGCATAGCAAGTGTCTTGGGATCTCACAGGAAGCGGCCGAAAAG GAAGACTTTCACTTTGTCTGCCGAGACTGCAAGCAAAAAGAGGAAGATTCCATCAAGCCCAAACTCCCACCACTC AGATTCCGGGTCAGCGCCTCAGCATCTCCTTCGGCTGCTCCTCCAGTCGGTAAGAAGCTGAAATTAGAGGATGAC GAAGATCGTGCTCCGCCCTCGCCTGTGAAGAAATCGCATCTGGCTCTATCTAATATTCAAAACGAACCCTCAAGA ACACAACCCACTCTACACTCGTCTGCTGTTAGTCATGGCAACTTCTATCCTCCTGCGTCTCCCCAGCGCCGGCTC CATAACACAGATCACACTTCCCTTCCATCTTCAAGCCCTCCTCGTCCACCAGTTTCCCCGCCAAAGGGCATGAAT GGCTTGCTGCATACCACCGAGCAGCACGCGCGGCCATCCTCCTCTCAGCACTCCTTCCCGCCTAGGCAATCAGCT CCTCAACTTCCGCCCGTTGGATCGTTCCCTGTGCGGCCCTCCTCCTCTCACTCTGCCCAAAGTCCTGTTCAAAAC CAACCATCTATGTCACCAACCCAGGGCAACCCTGAGGTTGGCCCTATTGCCGGCTTCCCGTCTGTTTCAAGCCAT ACATCTCCGTGGAGTTCTTTCGAGACTCCGCGTCCGCAATCAGGTCATACAGCTACTCCGTCGATGTCTCACCAC TATCCATCTTTCTCTGCCACGACGCCCAACGGTAACCACTCTTCGCCTCCTCAGAGTTCTCACGGCATGGCTATG TCGGGAATTAGCCCGACCAAACAGTCACCTCGTCCGCTTACTGGCAGTAGCATGGCAGGCGCACCAGTCCTGCCG CCCATCCGCAGACTGGAGCCGAGCCCAAAGCTCATGGGCCGCAGCTCCCCAGATGCTCCGATCCCCCCGCCTGTC AAGTGCATGACACCTGAGCAGGAGGAACGCCGGCTGAGAGAGAATGCTTCAATGCTACACCAGAGCCACCACTAC CAGAGCAATGGACAGCATCTGATGTCGTCACCATCGCTGAGTCGCATTCCTCCCTTGGCCTCCGGGACGTCCCAG TACCCGGATCCTGTTCCTTCGCCTCGGCGTGAAAGCAATGGCCAAAACCAATGA |
Gene | >Pro_DTO377G3_2|g3648.t1 ATGGGATCGCGAAAGCGCACCCACTCCGAGGTCGCCTCGGTGGCCGAGCAACAGGTACCAGAAGAGCCTGGTTTG CTTTCACAGCTCAGGAGCAACTGGGCATTTGCAAGCCTCATGCAATACATTGCTATCTTTGGCCAGGTCATGAAG ATTGACGAGGACTTTGGGATTGAGGTATGTCTATTAGCATGGTCTGGATTGGGATCAATGCTGTGCGCTTCTTGT CGCATTGATGAGAAAATACACGAGCAGGTCTCACTTGATTGAATTATCGCTGATGTCTTTTGCCCCCGCCAGGAT CTAGAAGTCGAATGTCTCAAACCCGAGCCCTCTCATAAACTACTGGAGATTGGATTGTGTCTCCTCAAGTGGATT TCGTCGCATCGCGGTCTTACGTACGTTTACTGGAACACATTTCTCGGTATCCTGAGTCTCACTGACACTACTATG TTGGCAGATTCGACAATTTCGATGAATACACCCGACGCCAGTACAATGCGAAAGCACCTAATATCACTAATCCCT TCGGTTACGATGAAGAACCAAACAAGTTCCTGTATTTCGATGTTTTCACCAAGATCCGTGTCCTCCACCAGCTGA CGGTATGGACATTCTGGAACGCGGACCGCATTCGCGACAAGATGCCCGAAAAGAAGGAAACCGAGCAGACAGAAT GGGTAAGCTATCTCTCGTATAGATTTGACCCCTGACGATCGCATACTGACTTCTCCCAGCGTATTGAAGAGTTTG GCTGGGATCGCGAAGGGCGATCATACTACGTGCTAGATGACAATCGCCTCTACCGTCGCACCGACCCTCCTCCAC CTCCCCCTCCTCAGCGTCCCAAGAAGAAGGCAAAGAGCCGGTCTTCTCGAGTATCAAGAACGTCAAAGCGTACAT CTACGGCAGCGGCGGAAGAGGGTTCCGACGAGGAAAGCAAGGATACCAACGATGCAGCCGTCGCGGCCTTCTCTA AAGATCCTTTCAAGTGGGAATGTGTGGCTGTCACACTCCAGGAATACCAGGCTTTCTTGGAGACAATCCAGAAAA CCAAGGACGCGGACGAGAAATACCTACGCGATAGCATAGTTGAGCATGTCCTGCCTATCCTCGAGAAGGCAGAGG AAGCGCAGCAGCGCAAGCGTCAGAAGCGTGAAAAGGAGCTTCTGAATATGCAGCTTGTCGCCGGTGCTAAGAGAT CTAGTCGACTTGCCGCCAAGGAAGAAAAAGAACGACAGGATCGAGAGGCTGCCGAAGCCGCCCAGAAGCGTGAAA ACGACCTAGCCGAGGCTCGTAAGGAGCAGGCAAGGCAAAGTCAGCTTGAAGAAGATCGACAGTCGCGTACAATGA CTCGCGAGCACCGCATCAGAGACCGTGAACAGAAGCGACTGCTGCATGAGGCTGAGCTGGAAAGGATCGCCGAAG AACAAGAAAGAATTGACAGGGGTGAAAGTAGGGTGTCTGCCCGAAACCTCCAGGCTGACCTGGAGAAGTCCCAGA AGAACCTGGCAGGGCTTACCCAAGATGATCAGTGGATCTTTGATTGCTCTGGCTGTGGAGTGTATGGCGAGAACT TGGTGAGTTTCAGTCTCCAAGCACCTGAGCCTTAGCCTAACCTTTTCCTAGGATGATGGAAGTCACAGTGTTGCC TGCGAAAAATGCAATGTTTGGCAGCATAGCAAGTGTCTTGGGATCTCACAGGAAGCGGCCGAAAAGGAAGACTTT CACTTTGTCTGCCGAGACTGCAAGCAAAAAGAGGAAGATTCCATCAAGCCCAAACTCCCACCACTCAGATTCCGG GTCAGCGCCTCAGCATCTCCTTCGGCTGCTCCTCCAGTCGGTAAGAAGCTGAAATTAGAGGATGACGAAGATCGT GCTCCGCCCTCGCCTGTGAAGAAATCGCATCTGGCTCTATCTAATATTCAAAACGAACCCTCAAGAACACAACCC ACTCTACACTCGTCTGCTGTTAGTCATGGCAACTTCTATCCTCCTGCGTCTCCCCAGCGCCGGCTCCATAACACA GATCACACTTCCCTTCCATCTTCAAGCCCTCCTCGTCCACCAGTTTCCCCGCCAAAGGGCATGAATGGCTTGCTG CATACCACCGAGCAGCACGCGCGGCCATCCTCCTCTCAGCACTCCTTCCCGCCTAGGCAATCAGCTCCTCAACTT CCGCCCGTTGGATCGTTCCCTGTGCGGCCCTCCTCCTCTCACTCTGCCCAAAGTCCTGTTCAAAACCAACCATCT ATGTCACCAACCCAGGGCAACCCTGAGGTTGGCCCTATTGCCGGCTTCCCGTCTGTTTCAAGCCATACATCTCCG TGGAGTTCTTTCGAGACTCCGCGTCCGCAATCAGGTCATACAGCTACTCCGTCGATGTCTCACCACTATCCATCT TTCTCTGCCACGACGCCCAACGGTAACCACTCTTCGCCTCCTCAGAGTTCTCACGGCATGGCTATGTCGGGAATT AGCCCGACCAAACAGTCACCTCGTCCGCTTACTGGCAGTAGCATGGCAGGCGCACCAGTCCTGCCGCCCATCCGC AGACTGGAGCCGAGCCCAAAGCTCATGGGCCGCAGCTCCCCAGATGCTCCGATCCCCCCGCCTGTCAAGTGCATG ACACCTGAGCAGGAGGAACGCCGGCTGAGAGAGAATGCTTCAATGCTACACCAGAGCCACCACTACCAGAGCAAT GGACAGCATCTGATGTCGTCACCATCGCTGAGTCGCATTCCTCCCTTGGCCTCCGGGACGTCCCAGTACCCGGAT CCTGTTCCTTCGCCTCGGCGTGAAAGCAATGGCCAAAACCAATGA |