Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g364.t1
Gene name
Locationscaffold_01:922903..924319
Strand+
Gene length (bp)1416
Transcript length (bp)1233
Coding sequence length (bp)1233
Protein length (aa) 411

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14031 D-ser_dehydrat Putative serine dehydratase domain 9.3E-26 282 394
PF01168 Ala_racemase_N Alanine racemase, N-terminal domain 1.6E-14 30 241

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g364.t1
MDYSLQNHASYIGRPVSELPTPALVLSKSVLERNTQILLDDVKRLGIEFRPHVKTLKCIEVTRMMLGNGTHRRIV
ASTLAEIRGALGLVKEGILDECLYGLPISASALPFLETITKSLKIILMVDSEQQIDLLESYAAKSSSPVAPWPVF
IKIDVGSQRAGMVTDSPSLPRLIQRIESSSAATVYGFYCHAGHSYACRTEDDAAAVLQTEVEGVVEAAKVLVDGK
SDRRIVVSVGSTPTAHVVKRLQGALPEGMELELHAGNYPTNDLQQVATSLVEPTQQAVRILADVCSVYPDRNEAL
INAGTIALSKETSEFPGFAVVVDRPQWSVVRMAQEHGILGWAESDQTRRLVAKTGSKSGDGEKVEAAFAVGDKVL
LYIQHACITAAMHYAYYVVDDEDIVRETWVPWKGW*
Coding >Pro_DTO377G3_2|g364.t1
ATGGATTATTCTCTACAGAATCACGCTTCCTATATCGGCCGACCGGTCTCCGAACTTCCCACCCCTGCTCTTGTC
CTGAGTAAGTCGGTGCTGGAGCGGAACACCCAGATCTTGTTGGATGATGTCAAACGATTGGGAATTGAGTTTCGG
CCTCATGTCAAGACCCTCAAGTGCATCGAGGTCACCCGCATGATGCTTGGCAACGGTACGCACCGTCGGATCGTC
GCATCGACGCTAGCCGAGATCCGGGGGGCGCTGGGTCTTGTAAAGGAAGGCATCCTAGACGAGTGTCTCTACGGT
CTACCCATCTCAGCCAGCGCCTTGCCCTTCCTCGAGACTATAACCAAGTCTCTGAAGATTATTCTGATGGTCGAC
AGCGAGCAGCAAATAGATCTGCTAGAATCCTACGCCGCCAAATCGTCTTCTCCCGTAGCACCATGGCCCGTCTTC
ATTAAGATCGACGTTGGCTCCCAGCGCGCGGGAATGGTCACAGACTCACCATCCCTCCCCAGATTAATCCAGCGC
ATCGAGTCATCGTCGGCAGCGACCGTTTACGGCTTCTACTGCCACGCCGGACACTCCTATGCATGCCGCACAGAG
GATGACGCCGCCGCAGTGCTCCAGACCGAAGTCGAAGGCGTAGTGGAAGCCGCCAAGGTGTTGGTAGACGGGAAA
TCCGATAGACGGATCGTGGTGTCGGTGGGGTCAACACCGACAGCACACGTGGTGAAAAGACTCCAGGGTGCATTG
CCCGAGGGGATGGAGTTAGAGTTGCATGCTGGAAACTACCCCACCAACGACCTTCAGCAAGTAGCGACCTCGCTC
GTGGAACCGACACAGCAGGCGGTGCGCATTCTCGCCGATGTCTGCAGCGTGTATCCTGATCGCAACGAGGCGCTC
ATCAACGCCGGGACCATCGCGCTCTCGAAGGAGACGAGCGAGTTCCCCGGGTTTGCGGTTGTCGTTGATCGGCCC
CAGTGGAGTGTTGTGCGGATGGCACAGGAACATGGCATTCTGGGGTGGGCGGAGTCGGATCAGACACGCAGGCTT
GTTGCGAAGACGGGGTCGAAGTCTGGTGATGGGGAGAAGGTGGAAGCTGCGTTTGCGGTTGGGGACAAGGTTTTG
TTGTATATCCAGCATGCTTGTATCACGGCTGCTATGCATTATGCTTATTATGTTGTTGATGATGAGGATATTGTT
AGGGAGACGTGGGTTCCGTGGAAGGGGTGGTGA
Transcript >Pro_DTO377G3_2|g364.t1
ATGGATTATTCTCTACAGAATCACGCTTCCTATATCGGCCGACCGGTCTCCGAACTTCCCACCCCTGCTCTTGTC
CTGAGTAAGTCGGTGCTGGAGCGGAACACCCAGATCTTGTTGGATGATGTCAAACGATTGGGAATTGAGTTTCGG
CCTCATGTCAAGACCCTCAAGTGCATCGAGGTCACCCGCATGATGCTTGGCAACGGTACGCACCGTCGGATCGTC
GCATCGACGCTAGCCGAGATCCGGGGGGCGCTGGGTCTTGTAAAGGAAGGCATCCTAGACGAGTGTCTCTACGGT
CTACCCATCTCAGCCAGCGCCTTGCCCTTCCTCGAGACTATAACCAAGTCTCTGAAGATTATTCTGATGGTCGAC
AGCGAGCAGCAAATAGATCTGCTAGAATCCTACGCCGCCAAATCGTCTTCTCCCGTAGCACCATGGCCCGTCTTC
ATTAAGATCGACGTTGGCTCCCAGCGCGCGGGAATGGTCACAGACTCACCATCCCTCCCCAGATTAATCCAGCGC
ATCGAGTCATCGTCGGCAGCGACCGTTTACGGCTTCTACTGCCACGCCGGACACTCCTATGCATGCCGCACAGAG
GATGACGCCGCCGCAGTGCTCCAGACCGAAGTCGAAGGCGTAGTGGAAGCCGCCAAGGTGTTGGTAGACGGGAAA
TCCGATAGACGGATCGTGGTGTCGGTGGGGTCAACACCGACAGCACACGTGGTGAAAAGACTCCAGGGTGCATTG
CCCGAGGGGATGGAGTTAGAGTTGCATGCTGGAAACTACCCCACCAACGACCTTCAGCAAGTAGCGACCTCGCTC
GTGGAACCGACACAGCAGGCGGTGCGCATTCTCGCCGATGTCTGCAGCGTGTATCCTGATCGCAACGAGGCGCTC
ATCAACGCCGGGACCATCGCGCTCTCGAAGGAGACGAGCGAGTTCCCCGGGTTTGCGGTTGTCGTTGATCGGCCC
CAGTGGAGTGTTGTGCGGATGGCACAGGAACATGGCATTCTGGGGTGGGCGGAGTCGGATCAGACACGCAGGCTT
GTTGCGAAGACGGGGTCGAAGTCTGGTGATGGGGAGAAGGTGGAAGCTGCGTTTGCGGTTGGGGACAAGGTTTTG
TTGTATATCCAGCATGCTTGTATCACGGCTGCTATGCATTATGCTTATTATGTTGTTGATGATGAGGATATTGTT
AGGGAGACGTGGGTTCCGTGGAAGGGGTGGTGA
Gene >Pro_DTO377G3_2|g364.t1
ATGGATTATTCTCTACAGAATCACGCTTCCTATATCGGCCGACCGGTCTCCGAACTTCCCACCCCTGCTCTTGTC
CTGAGTAAGTCGGTGCTGGAGCGGAACACCCAGATCTTGTTGGATGATGTCAAACGATTGGGAATTGAGTTTCGG
CCTCATGTCAAGACCCTCAAGGTACAGCTTCTATGCAGTATTAGCTTTTAGGAAATGCACTAATTGCATTGGACC
TGCAGTGCATCGAGGTCACCCGCATGATGCTTGGCAACGGTACGCACCGTCGGATCGTCGCATCGACGCTAGCCG
AGATCCGGGGGGCGCTGGGTCTTGTAAAGGAAGGCATCCTAGACGAGGTGAGTAACAGTAACTATTTCAAAACCA
AAGTGTAGCAGCTAAACCATGACAGTGTCTCTACGGTCTACCCATCTCAGCCAGCGCCTTGCCCTTCCTCGAGAC
TATAACCAAGTCTCTGAAGATTATTCTGATGGTCGACAGCGAGCAGCAAATAGATCTGCTAGAATCCTACGCCGC
CAAATCGTCTTCTCCCGTAGCACCATGGCCCGTCTTCATTAAGATCGACGTTGGCTCCCAGCGCGCGGGAATGGT
CACAGACTCACCATCCCTCCCCAGATTAATCCAGCGCATCGAGTCATCGTCGGCAGCGACCGTTTACGGCTTCTA
CTGCCACGCCGGACACTCCTATGCATGCCGCACAGAGGATGACGCCGCCGCAGTGCTCCAGACCGAAGTCGAAGG
CGTAGTGGAAGCCGCCAAGGTGTTGGTAGACGGGAAATCCGATAGACGGATCGTGGTGTCGGTGGGGTCAACACC
GACAGCACACGTGGTGAAAAGACTCCAGGGTGCATTGCCCGAGGGGATGGAGTTAGAGTTGCATGCTGGTATGTG
ATGCGTGACAACTAGCTAGGTGCCATACTACTGCCTGAAACAGAATGACTGACACGGACGCTAGGAAACTACCCC
ACCAACGACCTTCAGCAAGTAGCGACCTCGCTCGTGGAACCGACACAGCAGGCGGTGCGCATTCTCGCCGATGTC
TGCAGCGTGTATCCTGATCGCAACGAGGCGCTCATCAACGCCGGGACCATCGCGCTCTCGAAGGAGACGAGCGAG
TTCCCCGGGTTTGCGGTTGTCGTTGATCGGCCCCAGTGGAGTGTTGTGCGGATGGCACAGGAACATGGCATTCTG
GGGTGGGCGGAGTCGGATCAGACACGCAGGCTTGTTGCGAAGACGGGGTCGAAGTCTGGTGATGGGGAGAAGGTG
GAAGCTGCGTTTGCGGTTGGGGACAAGGTTTTGTTGTATATCCAGCATGCTTGTATCACGGCTGCTATGCATTAT
GCTTATTATGTTGTTGATGATGAGGATATTGTTAGGGAGACGTGGGTTCCGTGGAAGGGGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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