Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3639.t1
Gene name
Locationscaffold_06:285008..286769
Strand+
Gene length (bp)1761
Transcript length (bp)1590
Coding sequence length (bp)1590
Protein length (aa) 530

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 9.1E-57 33 467
PF00324 AA_permease Amino acid permease 2.6E-22 44 484

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 63 85 22
3 106 128 22
4 148 170 22
5 177 196 19
6 220 237 17
7 257 279 22
8 303 325 22
9 359 378 19
10 388 410 22
11 423 445 22
12 460 479 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3639.t1
MTNIDDLELEAAGYEAAMPRRFSKWSLGALSFTLTCTWLGTGSAIGIGLTEASSGGTIWALPIAGVMTTIVSIGM
AELASAYPVAGAQYYWSFMVAREDYRPFASFVNGWMSVIGWWLSSGSVANFVASMVLDITVAWYPDYDPKQWHAY
LIYVCLIWLAAAINILMANWIPLYNKLMFVLAVLTLTSTTIVLFVVTKDHASGSAIFTDTTNRTGWSSDGFAFML
AVANSVFAYLGSDCGAHMCEEIPNPSKNVPKVMIYPLLAGFVTTLPFAAALLYATPDIDAVLHTVTGLPLFDIYY
NGTGSRVAASILMAFFAFLFFSNLVANATTASRTIWAVSRDGALPYSGYWQRVHPGMQVPIHALLLSAVFVSLYG
LIFLGSSTAFSAMVNAAVVFLQTSCVLPQAVLLWRGRDRVLPARYFDLGRYGSTINAISVLWVVFLDIIYCFPTE
MPVTPENMSYVSVVCTGLVCFVIVLWHATKKGIFKGPRVDFGMLNARREEAIEGILVDNDGVKEKDIGAYKGEVK
LERD*
Coding >Pro_DTO377G3_2|g3639.t1
ATGACGAACATTGATGATCTCGAGCTCGAGGCCGCTGGCTATGAGGCCGCTATGCCTCGCCGGTTCTCTAAATGG
TCTCTAGGAGCCTTGTCTTTTACCCTGACATGCACGTGGCTAGGCACTGGTTCGGCGATTGGTATCGGTTTGACA
GAGGCTTCGTCAGGCGGTACTATCTGGGCTCTCCCAATTGCTGGGGTCATGACAACGATAGTTTCAATTGGAATG
GCCGAGCTAGCCTCTGCATACCCAGTTGCAGGTGCCCAGTACTACTGGTCTTTTATGGTTGCACGAGAAGACTAT
AGACCCTTCGCTTCATTTGTAAACGGCTGGATGAGTGTCATCGGTTGGTGGCTCTCTTCTGGATCTGTCGCCAAT
TTCGTCGCCTCCATGGTTCTCGATATTACCGTCGCCTGGTATCCGGACTATGACCCAAAGCAATGGCACGCGTAT
CTGATTTATGTCTGTCTGATCTGGTTGGCGGCGGCGATCAATATCCTGATGGCAAACTGGATTCCTCTTTATAAC
AAGCTGATGTTTGTCTTGGCCGTGCTGACACTGACCTCCACGACGATTGTGTTGTTCGTCGTCACGAAGGACCAC
GCCTCTGGCTCTGCAATCTTTACCGATACCACGAACCGGACGGGCTGGTCTTCCGATGGATTTGCCTTCATGCTC
GCCGTGGCAAACTCGGTTTTCGCCTATCTGGGTAGCGATTGTGGTGCTCACATGTGCGAGGAGATTCCTAACCCG
TCTAAGAATGTGCCCAAGGTCATGATCTACCCGCTCCTAGCAGGCTTTGTTACAACTTTACCCTTCGCTGCGGCT
CTGCTATACGCAACCCCTGATATTGATGCAGTACTCCACACTGTGACCGGCCTTCCCCTGTTTGACATCTACTAC
AACGGAACGGGCTCTCGAGTGGCAGCTTCGATTCTCATGGCTTTCTTCGCCTTTCTTTTCTTTAGTAACTTGGTG
GCCAATGCTACTACGGCATCACGCACAATATGGGCCGTTTCCCGTGATGGAGCGCTGCCTTACTCTGGGTATTGG
CAACGTGTACATCCTGGTATGCAAGTTCCCATCCATGCTCTTCTATTATCTGCGGTATTCGTTTCGCTATATGGA
CTCATCTTCCTTGGATCCTCCACTGCTTTCTCGGCTATGGTCAACGCAGCCGTCGTGTTTCTTCAAACGTCCTGC
GTCCTTCCTCAGGCTGTTTTGCTATGGCGCGGCCGCGATCGGGTCCTTCCAGCACGCTATTTTGATCTCGGCCGG
TACGGGTCTACTATCAATGCGATTTCAGTCTTGTGGGTGGTGTTCCTCGATATCATCTACTGTTTCCCCACTGAG
ATGCCTGTGACCCCCGAGAATATGAGTTATGTGTCAGTCGTTTGTACTGGACTTGTTTGCTTTGTGATTGTGCTA
TGGCATGCCACCAAGAAGGGGATTTTCAAAGGACCAAGGGTCGACTTCGGTATGCTCAACGCTAGGAGAGAAGAA
GCTATTGAAGGTATCTTGGTAGACAATGATGGCGTGAAAGAAAAAGATATCGGGGCATATAAGGGCGAAGTGAAG
CTAGAAAGGGATTAA
Transcript >Pro_DTO377G3_2|g3639.t1
ATGACGAACATTGATGATCTCGAGCTCGAGGCCGCTGGCTATGAGGCCGCTATGCCTCGCCGGTTCTCTAAATGG
TCTCTAGGAGCCTTGTCTTTTACCCTGACATGCACGTGGCTAGGCACTGGTTCGGCGATTGGTATCGGTTTGACA
GAGGCTTCGTCAGGCGGTACTATCTGGGCTCTCCCAATTGCTGGGGTCATGACAACGATAGTTTCAATTGGAATG
GCCGAGCTAGCCTCTGCATACCCAGTTGCAGGTGCCCAGTACTACTGGTCTTTTATGGTTGCACGAGAAGACTAT
AGACCCTTCGCTTCATTTGTAAACGGCTGGATGAGTGTCATCGGTTGGTGGCTCTCTTCTGGATCTGTCGCCAAT
TTCGTCGCCTCCATGGTTCTCGATATTACCGTCGCCTGGTATCCGGACTATGACCCAAAGCAATGGCACGCGTAT
CTGATTTATGTCTGTCTGATCTGGTTGGCGGCGGCGATCAATATCCTGATGGCAAACTGGATTCCTCTTTATAAC
AAGCTGATGTTTGTCTTGGCCGTGCTGACACTGACCTCCACGACGATTGTGTTGTTCGTCGTCACGAAGGACCAC
GCCTCTGGCTCTGCAATCTTTACCGATACCACGAACCGGACGGGCTGGTCTTCCGATGGATTTGCCTTCATGCTC
GCCGTGGCAAACTCGGTTTTCGCCTATCTGGGTAGCGATTGTGGTGCTCACATGTGCGAGGAGATTCCTAACCCG
TCTAAGAATGTGCCCAAGGTCATGATCTACCCGCTCCTAGCAGGCTTTGTTACAACTTTACCCTTCGCTGCGGCT
CTGCTATACGCAACCCCTGATATTGATGCAGTACTCCACACTGTGACCGGCCTTCCCCTGTTTGACATCTACTAC
AACGGAACGGGCTCTCGAGTGGCAGCTTCGATTCTCATGGCTTTCTTCGCCTTTCTTTTCTTTAGTAACTTGGTG
GCCAATGCTACTACGGCATCACGCACAATATGGGCCGTTTCCCGTGATGGAGCGCTGCCTTACTCTGGGTATTGG
CAACGTGTACATCCTGGTATGCAAGTTCCCATCCATGCTCTTCTATTATCTGCGGTATTCGTTTCGCTATATGGA
CTCATCTTCCTTGGATCCTCCACTGCTTTCTCGGCTATGGTCAACGCAGCCGTCGTGTTTCTTCAAACGTCCTGC
GTCCTTCCTCAGGCTGTTTTGCTATGGCGCGGCCGCGATCGGGTCCTTCCAGCACGCTATTTTGATCTCGGCCGG
TACGGGTCTACTATCAATGCGATTTCAGTCTTGTGGGTGGTGTTCCTCGATATCATCTACTGTTTCCCCACTGAG
ATGCCTGTGACCCCCGAGAATATGAGTTATGTGTCAGTCGTTTGTACTGGACTTGTTTGCTTTGTGATTGTGCTA
TGGCATGCCACCAAGAAGGGGATTTTCAAAGGACCAAGGGTCGACTTCGGTATGCTCAACGCTAGGAGAGAAGAA
GCTATTGAAGGTATCTTGGTAGACAATGATGGCGTGAAAGAAAAAGATATCGGGGCATATAAGGGCGAAGTGAAG
CTAGAAAGGGATTAA
Gene >Pro_DTO377G3_2|g3639.t1
ATGACGAACATTGATGATCTCGAGCTCGAGGCCGCTGGCTATGAGGCCGCTATGCCTCGCCGGTTCTCTAAATGG
TCTCTAGGAGCCTTGTCTTTTACCCTGACATGCACGTGGCTAGGCACTGGTTCGGCGATTGGTATCGGTTTGACA
GAGGCTTCGTCAGGCGGTACTATCTGGGCTCTCCCAATTGCTGGGGTCATGACAACGATAGTTTCAATTGGAATG
GCCGAGCTAGCCTCTGCATACCCAGTTGCAGGTGCCCAGTACTACTGGTCTTTTATGGTTGCACGAGAAGACTAT
AGACCCTTCGCTTCATTTGTGTAATTGCATCTCCTCCTCGAACTGCCTGTTAAAATCTATCTTGCTAATCTTTTT
TTTTTGTTCAGAAACGGCTGGATGAGTGTCATCGGTTGGTGGCTCTCTTCTGGATCTGTCGCCAATTTCGTCGCC
TCCATGGTTCTCGATATTACCGTCGCCTGGTATCCGGACTATGACCCAAAGCAATGGCACGCGTATCTGATTTAT
GTCTGTCTGATCTGGTTGGCGGCGGCGATCAATATCCTGATGGCAAACTGGATTCCTCTTTATAACAAGCTGATG
TTTGTCTTGGCCGTGCTGACACTGACCTCCACGACGATTGTGTTGTTCGTCGTCACGAAGGACCACGCCTCTGGC
TCTGCAATCTTTACCGATACCACGAACCGGACGGGCTGGTCTTCCGATGGATTTGCCTTCATGCTCGCCGTGGCA
AACTCGGTTTTCGCCTATCTGGGTAGCGATTGTGGTGCTCACATGTGCGAGGAGATTCCTAACCCGTCTAAGAAT
GTGCCCAAGGTCATGATCTACCCGCTCCTAGCAGGCTTTGTTACAACTTTACCCTTCGCTGCGGCTCTGCTATAC
GCAACCCCTGATATTGATGCAGTACTCCACACTGTGACCGGCCTTCCCCTGTTTGACATCTACTACAACGGAACG
GGCTCTCGAGTGGCAGCTTCGATTCTCATGGCTTTCTTCGCCTTTCTTTTCTTTAGTAACTTGGTGGCCAATGGT
ATGTGGTTGTGAAAAGTTATTTGAAGTTTGTCTGACGATATTTTTGCAGCTACTACGGCATCACGCACAATATGG
GCCGTTTCCCGTGATGGAGCGCTGCCTTACTCTGGGTATTGGCAACGTGTACATCCTGGTATGCAAGTTCCCATC
CATGCTCTTCTATTATCTGCGGTATTCGTTTCGGTATGATACATTTCTCAACCCTTTTTGTTCACTCTCAGTTAA
CAACTTCAATAGCTATATGGACTCATCTTCCTTGGATCCTCCACTGCTTTCTCGGCTATGGTCAACGCAGCCGTC
GTGTTTCTTCAAACGTCCTGCGTCCTTCCTCAGGCTGTTTTGCTATGGCGCGGCCGCGATCGGGTCCTTCCAGCA
CGCTATTTTGATCTCGGCCGGTACGGGTCTACTATCAATGCGATTTCAGTCTTGTGGGTGGTGTTCCTCGATATC
ATCTACTGTTTCCCCACTGAGATGCCTGTGACCCCCGAGAATATGAGTTATGTGTCAGTCGTTTGTACTGGACTT
GTTTGCTTTGTGATTGTGCTATGGCATGCCACCAAGAAGGGGATTTTCAAAGGACCAAGGGTCGACTTCGGTATG
CTCAACGCTAGGAGAGAAGAAGCTATTGAAGGTATCTTGGTAGACAATGATGGCGTGAAAGAAAAAGATATCGGG
GCATATAAGGGCGAAGTGAAGCTAGAAAGGGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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