© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3639.t1 |
| Gene name | |
| Location | scaffold_06:285008..286769 |
| Strand | + |
| Gene length (bp) | 1761 |
| Transcript length (bp) | 1590 |
| Coding sequence length (bp) | 1590 |
| Protein length (aa) | 530 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.0E-58 | 33 | 467 |
| PF00324 | AA_permease | Amino acid permease | 2.8E-22 | 44 | 484 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 26 | 48 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 106 | 128 | 22 |
| 4 | 148 | 170 | 22 |
| 5 | 177 | 196 | 19 |
| 6 | 220 | 237 | 17 |
| 7 | 257 | 279 | 22 |
| 8 | 303 | 325 | 22 |
| 9 | 359 | 378 | 19 |
| 10 | 388 | 410 | 22 |
| 11 | 423 | 445 | 22 |
| 12 | 460 | 479 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3639.t1 MTNIDDLELEAAGYEAAMPRRFSKWSLGALSFTLTCTWLGTGSAIGIGLTEASSGGTIWALPIAGVMTTIVSIGM AELASAYPVAGAQYYWSFMVAREDYRPFASFVNGWMSVIGWWLSSGSVANFVASMVLDITVAWYPDYDPKQWHAY LIYVCLIWLAAAINILMANWIPLYNKLMFVLAVLTLTSTTIVLFVVTKDHASGSAIFTDTTNRTGWSSDGFAFML AVANSVFAYLGSDCGAHMCEEIPNPSKNVPKVMIYPLLAGFVTTLPFAAALLYATPDIDAVLHTVTGLPLFDIYY NGTGSRVAASILMAFFAFLFFSNLVANATTASRTIWAVSRDGALPYSGYWQRVHPGMQVPIHALLLSAVFVSLYG LIFLGSSTAFSAMVNAAVVFLQTSCVLPQAVLLWRGRDRVLPARYFDLGRYGSTINAISVLWVVFLDIIYCFPTE MPVTPENMSYVSVVCTGLVCFVIVLWHATKKGIFKGPRVDFGMLNARREEAIEGILVDNDGVKEKDIGAYKGEVK LERD* |
| Coding | >Pro_DTO377G3_2|g3639.t1 ATGACGAACATTGATGATCTCGAGCTCGAGGCCGCTGGCTATGAGGCCGCTATGCCTCGCCGGTTCTCTAAATGG TCTCTAGGAGCCTTGTCTTTTACCCTGACATGCACGTGGCTAGGCACTGGTTCGGCGATTGGTATCGGTTTGACA GAGGCTTCGTCAGGCGGTACTATCTGGGCTCTCCCAATTGCTGGGGTCATGACAACGATAGTTTCAATTGGAATG GCCGAGCTAGCCTCTGCATACCCAGTTGCAGGTGCCCAGTACTACTGGTCTTTTATGGTTGCACGAGAAGACTAT AGACCCTTCGCTTCATTTGTAAACGGCTGGATGAGTGTCATCGGTTGGTGGCTCTCTTCTGGATCTGTCGCCAAT TTCGTCGCCTCCATGGTTCTCGATATTACCGTCGCCTGGTATCCGGACTATGACCCAAAGCAATGGCACGCGTAT CTGATTTATGTCTGTCTGATCTGGTTGGCGGCGGCGATCAATATCCTGATGGCAAACTGGATTCCTCTTTATAAC AAGCTGATGTTTGTCTTGGCCGTGCTGACACTGACCTCCACGACGATTGTGTTGTTCGTCGTCACGAAGGACCAC GCCTCTGGCTCTGCAATCTTTACCGATACCACGAACCGGACGGGCTGGTCTTCCGATGGATTTGCCTTCATGCTC GCCGTGGCAAACTCGGTTTTCGCCTATCTGGGTAGCGATTGTGGTGCTCACATGTGCGAGGAGATTCCTAACCCG TCTAAGAATGTGCCCAAGGTCATGATCTACCCGCTCCTAGCAGGCTTTGTTACAACTTTACCCTTCGCTGCGGCT CTGCTATACGCAACCCCTGATATTGATGCAGTACTCCACACTGTGACCGGCCTTCCCCTGTTTGACATCTACTAC AACGGAACGGGCTCTCGAGTGGCAGCTTCGATTCTCATGGCTTTCTTCGCCTTTCTTTTCTTTAGTAACTTGGTG GCCAATGCTACTACGGCATCACGCACAATATGGGCCGTTTCCCGTGATGGAGCGCTGCCTTACTCTGGGTATTGG CAACGTGTACATCCTGGTATGCAAGTTCCCATCCATGCTCTTCTATTATCTGCGGTATTCGTTTCGCTATATGGA CTCATCTTCCTTGGATCCTCCACTGCTTTCTCGGCTATGGTCAACGCAGCCGTCGTGTTTCTTCAAACGTCCTGC GTCCTTCCTCAGGCTGTTTTGCTATGGCGCGGCCGCGATCGGGTCCTTCCAGCACGCTATTTTGATCTCGGCCGG TACGGGTCTACTATCAATGCGATTTCAGTCTTGTGGGTGGTGTTCCTCGATATCATCTACTGTTTCCCCACTGAG ATGCCTGTGACCCCCGAGAATATGAGTTATGTGTCAGTCGTTTGTACTGGACTTGTTTGCTTTGTGATTGTGCTA TGGCATGCCACCAAGAAGGGGATTTTCAAAGGACCAAGGGTCGACTTCGGTATGCTCAACGCTAGGAGAGAAGAA GCTATTGAAGGTATCTTGGTAGACAATGATGGCGTGAAAGAAAAAGATATCGGGGCATATAAGGGCGAAGTGAAG CTAGAAAGGGATTAA |
| Transcript | >Pro_DTO377G3_2|g3639.t1 ATGACGAACATTGATGATCTCGAGCTCGAGGCCGCTGGCTATGAGGCCGCTATGCCTCGCCGGTTCTCTAAATGG TCTCTAGGAGCCTTGTCTTTTACCCTGACATGCACGTGGCTAGGCACTGGTTCGGCGATTGGTATCGGTTTGACA GAGGCTTCGTCAGGCGGTACTATCTGGGCTCTCCCAATTGCTGGGGTCATGACAACGATAGTTTCAATTGGAATG GCCGAGCTAGCCTCTGCATACCCAGTTGCAGGTGCCCAGTACTACTGGTCTTTTATGGTTGCACGAGAAGACTAT AGACCCTTCGCTTCATTTGTAAACGGCTGGATGAGTGTCATCGGTTGGTGGCTCTCTTCTGGATCTGTCGCCAAT TTCGTCGCCTCCATGGTTCTCGATATTACCGTCGCCTGGTATCCGGACTATGACCCAAAGCAATGGCACGCGTAT CTGATTTATGTCTGTCTGATCTGGTTGGCGGCGGCGATCAATATCCTGATGGCAAACTGGATTCCTCTTTATAAC AAGCTGATGTTTGTCTTGGCCGTGCTGACACTGACCTCCACGACGATTGTGTTGTTCGTCGTCACGAAGGACCAC GCCTCTGGCTCTGCAATCTTTACCGATACCACGAACCGGACGGGCTGGTCTTCCGATGGATTTGCCTTCATGCTC GCCGTGGCAAACTCGGTTTTCGCCTATCTGGGTAGCGATTGTGGTGCTCACATGTGCGAGGAGATTCCTAACCCG TCTAAGAATGTGCCCAAGGTCATGATCTACCCGCTCCTAGCAGGCTTTGTTACAACTTTACCCTTCGCTGCGGCT CTGCTATACGCAACCCCTGATATTGATGCAGTACTCCACACTGTGACCGGCCTTCCCCTGTTTGACATCTACTAC AACGGAACGGGCTCTCGAGTGGCAGCTTCGATTCTCATGGCTTTCTTCGCCTTTCTTTTCTTTAGTAACTTGGTG GCCAATGCTACTACGGCATCACGCACAATATGGGCCGTTTCCCGTGATGGAGCGCTGCCTTACTCTGGGTATTGG CAACGTGTACATCCTGGTATGCAAGTTCCCATCCATGCTCTTCTATTATCTGCGGTATTCGTTTCGCTATATGGA CTCATCTTCCTTGGATCCTCCACTGCTTTCTCGGCTATGGTCAACGCAGCCGTCGTGTTTCTTCAAACGTCCTGC GTCCTTCCTCAGGCTGTTTTGCTATGGCGCGGCCGCGATCGGGTCCTTCCAGCACGCTATTTTGATCTCGGCCGG TACGGGTCTACTATCAATGCGATTTCAGTCTTGTGGGTGGTGTTCCTCGATATCATCTACTGTTTCCCCACTGAG ATGCCTGTGACCCCCGAGAATATGAGTTATGTGTCAGTCGTTTGTACTGGACTTGTTTGCTTTGTGATTGTGCTA TGGCATGCCACCAAGAAGGGGATTTTCAAAGGACCAAGGGTCGACTTCGGTATGCTCAACGCTAGGAGAGAAGAA GCTATTGAAGGTATCTTGGTAGACAATGATGGCGTGAAAGAAAAAGATATCGGGGCATATAAGGGCGAAGTGAAG CTAGAAAGGGATTAA |
| Gene | >Pro_DTO377G3_2|g3639.t1 ATGACGAACATTGATGATCTCGAGCTCGAGGCCGCTGGCTATGAGGCCGCTATGCCTCGCCGGTTCTCTAAATGG TCTCTAGGAGCCTTGTCTTTTACCCTGACATGCACGTGGCTAGGCACTGGTTCGGCGATTGGTATCGGTTTGACA GAGGCTTCGTCAGGCGGTACTATCTGGGCTCTCCCAATTGCTGGGGTCATGACAACGATAGTTTCAATTGGAATG GCCGAGCTAGCCTCTGCATACCCAGTTGCAGGTGCCCAGTACTACTGGTCTTTTATGGTTGCACGAGAAGACTAT AGACCCTTCGCTTCATTTGTGTAATTGCATCTCCTCCTCGAACTGCCTGTTAAAATCTATCTTGCTAATCTTTTT TTTTTGTTCAGAAACGGCTGGATGAGTGTCATCGGTTGGTGGCTCTCTTCTGGATCTGTCGCCAATTTCGTCGCC TCCATGGTTCTCGATATTACCGTCGCCTGGTATCCGGACTATGACCCAAAGCAATGGCACGCGTATCTGATTTAT GTCTGTCTGATCTGGTTGGCGGCGGCGATCAATATCCTGATGGCAAACTGGATTCCTCTTTATAACAAGCTGATG TTTGTCTTGGCCGTGCTGACACTGACCTCCACGACGATTGTGTTGTTCGTCGTCACGAAGGACCACGCCTCTGGC TCTGCAATCTTTACCGATACCACGAACCGGACGGGCTGGTCTTCCGATGGATTTGCCTTCATGCTCGCCGTGGCA AACTCGGTTTTCGCCTATCTGGGTAGCGATTGTGGTGCTCACATGTGCGAGGAGATTCCTAACCCGTCTAAGAAT GTGCCCAAGGTCATGATCTACCCGCTCCTAGCAGGCTTTGTTACAACTTTACCCTTCGCTGCGGCTCTGCTATAC GCAACCCCTGATATTGATGCAGTACTCCACACTGTGACCGGCCTTCCCCTGTTTGACATCTACTACAACGGAACG GGCTCTCGAGTGGCAGCTTCGATTCTCATGGCTTTCTTCGCCTTTCTTTTCTTTAGTAACTTGGTGGCCAATGGT ATGTGGTTGTGAAAAGTTATTTGAAGTTTGTCTGACGATATTTTTGCAGCTACTACGGCATCACGCACAATATGG GCCGTTTCCCGTGATGGAGCGCTGCCTTACTCTGGGTATTGGCAACGTGTACATCCTGGTATGCAAGTTCCCATC CATGCTCTTCTATTATCTGCGGTATTCGTTTCGGTATGATACATTTCTCAACCCTTTTTGTTCACTCTCAGTTAA CAACTTCAATAGCTATATGGACTCATCTTCCTTGGATCCTCCACTGCTTTCTCGGCTATGGTCAACGCAGCCGTC GTGTTTCTTCAAACGTCCTGCGTCCTTCCTCAGGCTGTTTTGCTATGGCGCGGCCGCGATCGGGTCCTTCCAGCA CGCTATTTTGATCTCGGCCGGTACGGGTCTACTATCAATGCGATTTCAGTCTTGTGGGTGGTGTTCCTCGATATC ATCTACTGTTTCCCCACTGAGATGCCTGTGACCCCCGAGAATATGAGTTATGTGTCAGTCGTTTGTACTGGACTT GTTTGCTTTGTGATTGTGCTATGGCATGCCACCAAGAAGGGGATTTTCAAAGGACCAAGGGTCGACTTCGGTATG CTCAACGCTAGGAGAGAAGAAGCTATTGAAGGTATCTTGGTAGACAATGATGGCGTGAAAGAAAAAGATATCGGG GCATATAAGGGCGAAGTGAAGCTAGAAAGGGATTAA |