Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3623.t1
Gene name
Locationscaffold_06:246402..248011
Strand+
Gene length (bp)1609
Transcript length (bp)1164
Coding sequence length (bp)1164
Protein length (aa) 388

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08584 Ribonuc_P_40 Ribonuclease P 40kDa (Rpp40) subunit 1.9E-68 83 334

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3623.t1
MFQEVDESSRREKCFTTITQLPAFINPKQVPSKRSPFSTIQNHAFVHSVEVILPKEFYSQIKPSLETKLEKPRYA
RVFMTPSALLEHEFFNTYIKSGNILMISEGRSGSDNVFTLKDGVLRIELGKEIYERTGLTGKPFRSGGRKHAKER
FLVELNLRLPSMLHGKKGFERIVWAFTNVLTQSMAWLFHDLESNPGPGEGNKPIDKVQPQLITCEPQEIAHEQII
TPPFYENGKVLENMSEDDLQEYCGSLSEWIAMVQMASPRLSGEDDVDPYLSRYAAPDAEEGQASDLMSLKWHGLI
SSRWTMQLFLNMLQNTKASWFALAVATLGKEAVEGRDGFMVMVLPSGQSSAQSSESSQTSQVKDEGTVGTDRVTF
CWELMGASVTEP*
Coding >Pro_DTO377G3_2|g3623.t1
ATGTTTCAAGAAGTAGACGAATCGTCTCGTCGCGAAAAGTGCTTCACAACCATCACTCAGCTGCCGGCGTTCATC
AACCCAAAGCAGGTCCCAAGCAAGAGATCGCCCTTTTCAACGATTCAAAATCATGCATTTGTACACTCAGTCGAG
GTTATCCTGCCAAAGGAGTTCTACTCACAGATCAAGCCGTCGCTCGAGACCAAACTGGAAAAACCTCGATATGCA
CGAGTCTTCATGACTCCTTCGGCTCTGCTTGAGCATGAATTCTTCAACACATACATCAAGTCAGGGAATATTTTG
ATGATCTCCGAAGGACGCTCGGGATCCGATAATGTCTTCACACTCAAAGACGGCGTACTTCGAATTGAACTAGGA
AAGGAGATATATGAGCGAACAGGTCTCACTGGCAAGCCTTTCCGCAGCGGCGGCAGAAAACATGCAAAAGAAAGA
TTCTTGGTAGAATTGAACTTACGGCTGCCCTCGATGCTGCATGGCAAGAAGGGCTTCGAAAGAATTGTATGGGCA
TTCACCAATGTTCTGACTCAATCAATGGCCTGGCTCTTCCACGACCTGGAAAGCAACCCTGGTCCGGGTGAAGGA
AACAAGCCGATCGACAAGGTTCAACCACAGTTGATAACCTGCGAGCCACAGGAAATTGCCCACGAGCAAATAATC
ACTCCGCCCTTTTACGAAAACGGGAAAGTACTCGAGAATATGTCGGAAGATGATCTGCAGGAATATTGTGGCTCC
CTATCCGAATGGATTGCCATGGTTCAGATGGCTTCTCCGCGGTTGTCTGGGGAAGATGACGTCGATCCGTACCTT
AGTCGGTATGCGGCTCCAGACGCAGAGGAAGGCCAGGCCTCTGATTTGATGAGCTTAAAATGGCATGGTTTGATA
TCCTCCCGTTGGACTATGCAGCTGTTCCTCAATATGTTGCAAAACACCAAGGCCAGCTGGTTTGCACTTGCCGTC
GCTACTCTAGGTAAAGAAGCCGTGGAAGGAAGGGACGGATTCATGGTTATGGTTCTTCCTAGTGGACAGTCTAGT
GCACAGTCTAGTGAATCTAGCCAGACGTCTCAGGTGAAGGACGAAGGAACCGTGGGAACTGACCGGGTGACTTTC
TGTTGGGAGTTGATGGGAGCATCAGTGACCGAGCCCTGA
Transcript >Pro_DTO377G3_2|g3623.t1
ATGTTTCAAGAAGTAGACGAATCGTCTCGTCGCGAAAAGTGCTTCACAACCATCACTCAGCTGCCGGCGTTCATC
AACCCAAAGCAGGTCCCAAGCAAGAGATCGCCCTTTTCAACGATTCAAAATCATGCATTTGTACACTCAGTCGAG
GTTATCCTGCCAAAGGAGTTCTACTCACAGATCAAGCCGTCGCTCGAGACCAAACTGGAAAAACCTCGATATGCA
CGAGTCTTCATGACTCCTTCGGCTCTGCTTGAGCATGAATTCTTCAACACATACATCAAGTCAGGGAATATTTTG
ATGATCTCCGAAGGACGCTCGGGATCCGATAATGTCTTCACACTCAAAGACGGCGTACTTCGAATTGAACTAGGA
AAGGAGATATATGAGCGAACAGGTCTCACTGGCAAGCCTTTCCGCAGCGGCGGCAGAAAACATGCAAAAGAAAGA
TTCTTGGTAGAATTGAACTTACGGCTGCCCTCGATGCTGCATGGCAAGAAGGGCTTCGAAAGAATTGTATGGGCA
TTCACCAATGTTCTGACTCAATCAATGGCCTGGCTCTTCCACGACCTGGAAAGCAACCCTGGTCCGGGTGAAGGA
AACAAGCCGATCGACAAGGTTCAACCACAGTTGATAACCTGCGAGCCACAGGAAATTGCCCACGAGCAAATAATC
ACTCCGCCCTTTTACGAAAACGGGAAAGTACTCGAGAATATGTCGGAAGATGATCTGCAGGAATATTGTGGCTCC
CTATCCGAATGGATTGCCATGGTTCAGATGGCTTCTCCGCGGTTGTCTGGGGAAGATGACGTCGATCCGTACCTT
AGTCGGTATGCGGCTCCAGACGCAGAGGAAGGCCAGGCCTCTGATTTGATGAGCTTAAAATGGCATGGTTTGATA
TCCTCCCGTTGGACTATGCAGCTGTTCCTCAATATGTTGCAAAACACCAAGGCCAGCTGGTTTGCACTTGCCGTC
GCTACTCTAGGTAAAGAAGCCGTGGAAGGAAGGGACGGATTCATGGTTATGGTTCTTCCTAGTGGACAGTCTAGT
GCACAGTCTAGTGAATCTAGCCAGACGTCTCAGGTGAAGGACGAAGGAACCGTGGGAACTGACCGGGTGACTTTC
TGTTGGGAGTTGATGGGAGCATCAGTGACCGAGCCCTGA
Gene >Pro_DTO377G3_2|g3623.t1
ATGTTTCAAGAAGTAGACGAATCGTCTCGTCGCGAAAAGTGCTTCACAACCATCACTCAGCTGCCGGCGTTCATC
AACCCAAAGCAGGTCCCAAGCAAGAGATCGCCCTTTTCAACGATTCAAAATCATGCATTTGTACACTCAGTAGGT
GGTCTATGGCTTTTTTGAGAGATTAAGGGTCATTTGACTGATTGTTGGTCATAGGTCGAGGTTATCCTGCCAAAG
GAGTTCTACTCACAGATCAAGCCGTCGCTCGAGACCAAACTGGAAAAACCTCGATATGCACGAGTCTTCATGACT
CCTTCGGCTCTGCTTGAGCATGAATTCTTCAACACATACATCAAGTCAGGTATTTATGTCTCCGCCAGACCAGTA
TAAAGGCTTTTCCACATTTGAGTGGCCATCATTTGCACAAGCATCAGACAGCTTTTGTGCCCAGAGAGACCATTT
CATCAAAGACGGCACTCTGACTTGGGACATAGGGAATATTTTGATGATCTCCGAAGGACGCTCGGGATCCGATAA
TGTCTTCACACTCAAAGACGGTTCGTTTCCCCGAAGCTGCGGCTGGAAGAGTCTCCGTTGCAGGACCGAAAGTTG
ACTCGAATGGAAATAGGCGTACTTCGAATTGAACTAGGAAAGGAGATATATGAGCGAACAGGTCTCACTGGCAAG
CCTTTCCGCAGCGGCGGCAGAAAACATGCAAAAGAAAGATTCTGTATGTACAATCAGAGCAAATGGGCTGGTCGA
ATATTTACTAATAATGTCGTCAGTGGTAGAATTGAACTTACGGCTGCCCTCGATGCTGCATGGCAAGAAGGGCTT
CGAAAGAATTGTATGGGCATTCACCAATGTTCTGACTCAATCAATGGCCTGGCTCTTCCACGACCTGGAAAGCAA
CCCTGGTCCGGGTGAAGGTGATCATGTCTCCGAAGCCAAAAAAGGAAATAGTAGCAAGAATATACTAAAAGTTGG
AGCAGGAAACAAGCCGATCGACAAGGTTCAACCACAGTTGATAACCTGCGAGCCACAGGAAATTGCCCACGAGCA
AATAATCACTCCGCCCTTTTACGAAAACGGGAAAGTACTCGAGAATATGTCGGAAGATGATCTGCAGGAATATTG
TGGCTCCCTATCCGAATGGATTGCCATGGTTCAGATGGCTTCTCCGCGGTTGTCTGGGGAAGATGACGTCGATCC
GTACCTTAGTCGGTATGCGGCTCCAGACGCAGAGGAAGGCCAGGCCTCTGATTTGATGAGCTTAAAATGGCATGG
TTTGATATCCTCCCGTTGGACTATGCAGCTGTTCCTCAATATGTTGTGAGTCACGAATATCATTTACAAAAAAAG
GCTGGTCAAGAGCTAACATTGTCTAATGGAAAGGCAAAACACCAAGGCCAGCTGGTTTGCACTTGCCGTCGCTAC
TCTAGGTAAAGAAGCCGTGGAAGGAAGGGACGGATTCATGGTTATGGTTCTTCCTAGTGGACAGTCTAGTGCACA
GTCTAGTGAATCTAGCCAGACGTCTCAGGTGAAGGACGAAGGAACCGTGGGAACTGACCGGGTGACTTTCTGTTG
GGAGTTGATGGGAGCATCAGTGACCGAGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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