Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3621.t1
Gene name
Locationscaffold_06:242868..244125
Strand-
Gene length (bp)1257
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 8.2E-07 37 65
PF00400 WD40 WD domain, G-beta repeat 2.3E-03 75 110
PF00400 WD40 WD domain, G-beta repeat 5.0E-03 230 266

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3621.t1
MAPASRRELLHKDHFAFVFGSVKTQNYLDPVSKGPGSHTIRTLAWNPTGQLIATGSADRTLRIWNPERPNVRYST
ELRGHTAGIEKALFNPVRDAELASCSADGTVRFWDVRSKTCVSRLDVGGEAFTLSWSADGSTMIVGKKDDTLIPV
SVQFPSSPTTHPDGANALNLPSSTPGATTYTALDPHPQTVQTNATTFSWCMPTPERPGQQIFVTTGEGKVKIMSY
PSFDIMHTLNAHTSACLSIALAPTGRYLAVGGSDALISLWDTTDWICRRTLSSENGGAIRGVSWSFDGRYIVGAC
DELGCGGNGLEIFHAESGDSIYTIPTAGINAGVSAVAWHPSRYWLAYSTTTDGPGSSSAGGLKIVGAAGGGL*
Coding >Pro_DTO377G3_2|g3621.t1
ATGGCGCCCGCTTCGCGTCGCGAGCTCCTACACAAGGATCACTTTGCATTCGTTTTTGGAAGCGTGAAGACTCAA
AACTACTTAGATCCTGTTTCCAAAGGACCAGGCTCTCACACGATTCGCACTCTTGCTTGGAACCCAACGGGCCAG
CTGATTGCCACTGGCTCAGCAGATCGCACTCTACGAATCTGGAACCCTGAACGTCCTAATGTACGATACTCCACC
GAATTGCGTGGTCACACAGCTGGTATCGAGAAGGCTCTTTTCAACCCAGTCCGCGACGCGGAGCTAGCCAGTTGC
TCGGCCGATGGTACGGTGCGCTTCTGGGATGTGCGCTCCAAAACATGTGTGAGCCGTCTAGATGTCGGCGGCGAA
GCATTTACACTCTCCTGGTCTGCTGATGGCAGCACAATGATCGTCGGCAAGAAGGACGACACCTTAATCCCCGTC
TCCGTTCAATTCCCCTCTTCTCCTACCACCCATCCTGATGGCGCAAATGCTCTTAACCTCCCCTCCTCTACACCC
GGCGCAACCACATACACAGCTCTCGACCCTCACCCTCAAACCGTCCAAACAAATGCGACAACCTTCTCCTGGTGC
ATGCCGACACCTGAACGTCCGGGGCAGCAAATATTCGTGACGACTGGCGAAGGCAAGGTCAAGATCATGTCCTAC
CCTTCCTTCGATATCATGCACACTCTCAACGCCCACACCTCGGCCTGCCTTTCAATTGCGCTCGCGCCGACAGGC
CGATACCTCGCAGTCGGTGGGAGCGATGCTCTCATCTCCCTCTGGGATACAACCGACTGGATCTGTCGTCGCACT
TTGTCCAGCGAGAATGGTGGTGCTATTCGTGGCGTGAGCTGGAGCTTCGATGGCCGCTACATTGTAGGCGCATGC
GACGAGCTTGGATGTGGTGGGAATGGACTGGAGATCTTCCACGCGGAGTCTGGTGATAGTATTTACACGATTCCT
ACTGCCGGCATCAATGCCGGTGTCTCTGCTGTTGCGTGGCATCCATCTCGCTACTGGCTAGCTTACTCGACTACC
ACTGATGGACCTGGTAGCTCCAGCGCTGGAGGCTTGAAGATTGTCGGTGCTGCTGGTGGTGGCTTGTAA
Transcript >Pro_DTO377G3_2|g3621.t1
ATGGCGCCCGCTTCGCGTCGCGAGCTCCTACACAAGGATCACTTTGCATTCGTTTTTGGAAGCGTGAAGACTCAA
AACTACTTAGATCCTGTTTCCAAAGGACCAGGCTCTCACACGATTCGCACTCTTGCTTGGAACCCAACGGGCCAG
CTGATTGCCACTGGCTCAGCAGATCGCACTCTACGAATCTGGAACCCTGAACGTCCTAATGTACGATACTCCACC
GAATTGCGTGGTCACACAGCTGGTATCGAGAAGGCTCTTTTCAACCCAGTCCGCGACGCGGAGCTAGCCAGTTGC
TCGGCCGATGGTACGGTGCGCTTCTGGGATGTGCGCTCCAAAACATGTGTGAGCCGTCTAGATGTCGGCGGCGAA
GCATTTACACTCTCCTGGTCTGCTGATGGCAGCACAATGATCGTCGGCAAGAAGGACGACACCTTAATCCCCGTC
TCCGTTCAATTCCCCTCTTCTCCTACCACCCATCCTGATGGCGCAAATGCTCTTAACCTCCCCTCCTCTACACCC
GGCGCAACCACATACACAGCTCTCGACCCTCACCCTCAAACCGTCCAAACAAATGCGACAACCTTCTCCTGGTGC
ATGCCGACACCTGAACGTCCGGGGCAGCAAATATTCGTGACGACTGGCGAAGGCAAGGTCAAGATCATGTCCTAC
CCTTCCTTCGATATCATGCACACTCTCAACGCCCACACCTCGGCCTGCCTTTCAATTGCGCTCGCGCCGACAGGC
CGATACCTCGCAGTCGGTGGGAGCGATGCTCTCATCTCCCTCTGGGATACAACCGACTGGATCTGTCGTCGCACT
TTGTCCAGCGAGAATGGTGGTGCTATTCGTGGCGTGAGCTGGAGCTTCGATGGCCGCTACATTGTAGGCGCATGC
GACGAGCTTGGATGTGGTGGGAATGGACTGGAGATCTTCCACGCGGAGTCTGGTGATAGTATTTACACGATTCCT
ACTGCCGGCATCAATGCCGGTGTCTCTGCTGTTGCGTGGCATCCATCTCGCTACTGGCTAGCTTACTCGACTACC
ACTGATGGACCTGGTAGCTCCAGCGCTGGAGGCTTGAAGATTGTCGGTGCTGCTGGTGGTGGCTTGTAA
Gene >Pro_DTO377G3_2|g3621.t1
ATGGCGCCCGCTTCGCGTCGCGAGCTCCTACACAAGGATCACTTTGCATTCGTTTTTGGAAGCGTGAAGACTCAA
AACTACTTAGATCCTGTTTCCAAAGGACCAGGCTCTCACACGTGAGTATGGCTTTTGCGCCCGGGGCTGTCGTTT
ATTTGCTGACAACGATCTGGAACCACAGGATTCGCACTCTTGCTTGGAACCCAACGGGCCAGCTGATTGCCACTG
GCTCAGCAGATCGCACTCTACGAATCTGGAACCCTGAACGTCCTAATGTACGATACTCCACCGAATTGCGTGGTC
ACACAGCTGGTATCGAGAAGGCTCTTTTCAACCCAGTCCGCGACGCGGAGCTAGCCAGTTGCTCGGCCGATGGTA
CGGTGCGCTTCTGGGATGTGCGCTCCAAAACATGTGTGAGCCGTCTAGATGTCGGCGGCGAAGCATTTACACTCT
CCTGGTCTGCTGATGGCAGCACAATGATCGTCGGCAAGAAGGTAACCATGCTGCGCTGCGACTCCGCAGACTTGA
TCTCTCTAGTGGCACAGTCACTAACATATGATATGTAAACAGGACGACACCTTAATCCCCGTCTCCGTTCAATTC
CCCTCTTCTCCTACCACCCATCCTGATGGCGCAAATGCTCTTAACCTCCCCTCCTCTACACCCGGCGCAACCACA
TACACAGCTCTCGACCCTCACCCTCAAACCGTCCAAACAAATGCGACAACCTTCTCCTGGTGCATGCCGACACCT
GAACGTCCGGGGCAGCAAATATTCGTGACGACTGGCGAAGGCAAGGTCAAGATCATGTCCTACCCTTCCTTCGAT
ATCATGCACACTCTCAACGCCCACACCTCGGCCTGCCTTTCAATTGCGCTCGCGCCGACAGGCCGATACCTCGCA
GTCGGTGGGAGCGATGCTCTCATCTCCCTCTGGGATACAACCGACTGGATCTGTCGTCGCACTTTGTCCAGCGAG
AATGGTGGTGCTATTCGTGGCGTGAGCTGGAGCTTCGATGGCCGCTACATTGTAGGCGCATGCGACGAGCTTGGA
TGTGGTGGGAATGGACTGGAGATCTTCCACGCGGAGTCTGGTGATAGTATTTACACGATTCCTACTGCCGGCATC
AATGCCGGTGTCTCTGCTGTTGCGTGGCATCCATCTCGCTACTGGCTAGCTTACTCGACTACCACTGATGGACCT
GGTAGCTCCAGCGCTGGAGGCTTGAAGATTGTCGGTGCTGCTGGTGGTGGCTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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