Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3619.t1
Gene name
Location	scaffold_06:237101..238390
Strand	+
Gene length (bp)	1289
Transcript length (bp)	1221
Coding sequence length (bp)	1221
Protein length (aa)	407

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03947	Ribosomal_L2_C	Ribosomal Proteins L2, C-terminal domain	8.0E-51	216	371
PF00181	Ribosomal_L2	Ribosomal Proteins L2, RNA binding domain	4.4E-23	111	186

GO

GO Term	Description	Terminal node
GO:0005840	ribosome	Yes
GO:0003735	structural constituent of ribosome	Yes
GO:0006412	translation	Yes
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0043232	intracellular non-membrane-bounded organelle	No
GO:0008152	metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0005575	cellular_component	No
GO:0071704	organic substance metabolic process	No
GO:0005198	structural molecule activity	No
GO:0043228	non-membrane-bounded organelle	No
GO:0008150	biological_process	No
GO:1901566	organonitrogen compound biosynthetic process	No
GO:0019538	protein metabolic process	No
GO:0043603	cellular amide metabolic process	No
GO:0006518	peptide metabolic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0043170	macromolecule metabolic process	No
GO:0044238	primary metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0009058	biosynthetic process	No
GO:0043229	intracellular organelle	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0043604	amide biosynthetic process	No
GO:0043043	peptide biosynthetic process	No
GO:0110165	cellular anatomical entity	No
GO:0043226	organelle	No
GO:0044237	cellular metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0009987	cellular process	No
GO:0009059	macromolecule biosynthetic process	No
GO:1901576	organic substance biosynthetic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3619.t1 MLQPRIALRGIRLPFRCLSSLPLPIRGYSTIVNEIEKTKPKSIETPANSFIDPNVSFAPPPGRDASGIQLRTYTP RTPGVRHLRRPVNDHLWKGRPVHKLTFPKRGHAKGGRNNSGRVTVRHHGGGAKRRIRTIDFLRMAPGPHTVERIE YDPGRTAHIALTSSKETGKLSYILAADGMRAGDVVQSYMSGIPEDLWKSMGSTVDPGVLAARTAWRGNCLPLHMV PVGTLIFNLGLRPGKGGQLCRSAGTYATVVAKGSDSRQQTIQNEEPEAEKKPLSQRDQQKQERLAQHITVRLSSG ETRLIHKDCCATVGITSNPNYQYTQLGKAGRSRWLNIRPTVRGLAMNAMDHPHGGGRGKSKGNVDPKSPWGIPTK SGYKTRPKWKINKAVVHARPRNQGKRRRGYN*
Coding	>Pro_DTO377G3_2\|g3619.t1 ATGCTTCAACCCCGAATTGCCCTACGGGGCATTCGGCTGCCCTTTAGGTGTCTCTCCTCTCTGCCTTTGCCAATC CGAGGCTATTCGACAATCGTGAATGAAATTGAGAAGACCAAGCCCAAGTCTATCGAAACGCCGGCGAACTCTTTT ATTGACCCGAATGTCTCGTTCGCTCCTCCCCCCGGCCGTGATGCTTCTGGCATTCAGCTGCGCACCTACACTCCG CGAACCCCCGGTGTGAGACATCTGCGGCGTCCTGTCAATGATCATTTGTGGAAAGGCCGCCCTGTGCACAAATTA ACATTTCCCAAGCGTGGCCACGCCAAGGGTGGTCGAAACAACTCTGGCCGAGTCACTGTCCGCCATCATGGAGGT GGTGCCAAGCGTCGAATTCGGACGATCGATTTTCTGCGCATGGCTCCGGGGCCGCACACAGTGGAGCGTATCGAG TATGATCCAGGGCGCACAGCGCATATCGCCCTGACTTCTAGTAAGGAGACCGGCAAGTTGAGCTACATTCTCGCC GCGGACGGTATGCGCGCCGGCGACGTGGTCCAGAGTTATATGTCCGGAATTCCCGAAGACTTGTGGAAGAGCATG GGCAGCACTGTCGATCCCGGTGTGCTCGCGGCCAGAACCGCCTGGAGAGGAAATTGTCTGCCGTTGCACATGGTT CCAGTGGGAACATTGATCTTCAACTTGGGATTGCGACCCGGGAAGGGTGGTCAATTGTGTCGGAGTGCTGGAACA TATGCTACAGTTGTGGCCAAGGGTAGTGACTCGCGTCAGCAAACGATTCAAAACGAAGAGCCCGAGGCCGAGAAG AAGCCCTTGTCGCAGCGTGACCAGCAGAAGCAGGAGCGTCTGGCCCAGCACATCACTGTCCGTCTCTCAAGTGGA GAGACTCGGCTCATCCACAAGGACTGCTGCGCTACCGTTGGTATTACCAGCAACCCGAACTACCAATACACCCAG CTCGGAAAGGCTGGTCGCTCACGCTGGCTTAACATTCGTCCGACGGTGCGTGGTCTGGCCATGAACGCCATGGAC CATCCCCACGGTGGTGGACGAGGAAAGTCTAAGGGTAACGTCGACCCGAAGAGTCCTTGGGGTATTCCGACCAAA TCCGGCTACAAGACCCGCCCAAAGTGGAAGATCAACAAGGCCGTTGTTCATGCCAGACCTCGCAACCAAGGAAAG CGCCGTCGTGGATACAACTAA
Transcript	>Pro_DTO377G3_2\|g3619.t1 ATGCTTCAACCCCGAATTGCCCTACGGGGCATTCGGCTGCCCTTTAGGTGTCTCTCCTCTCTGCCTTTGCCAATC CGAGGCTATTCGACAATCGTGAATGAAATTGAGAAGACCAAGCCCAAGTCTATCGAAACGCCGGCGAACTCTTTT ATTGACCCGAATGTCTCGTTCGCTCCTCCCCCCGGCCGTGATGCTTCTGGCATTCAGCTGCGCACCTACACTCCG CGAACCCCCGGTGTGAGACATCTGCGGCGTCCTGTCAATGATCATTTGTGGAAAGGCCGCCCTGTGCACAAATTA ACATTTCCCAAGCGTGGCCACGCCAAGGGTGGTCGAAACAACTCTGGCCGAGTCACTGTCCGCCATCATGGAGGT GGTGCCAAGCGTCGAATTCGGACGATCGATTTTCTGCGCATGGCTCCGGGGCCGCACACAGTGGAGCGTATCGAG TATGATCCAGGGCGCACAGCGCATATCGCCCTGACTTCTAGTAAGGAGACCGGCAAGTTGAGCTACATTCTCGCC GCGGACGGTATGCGCGCCGGCGACGTGGTCCAGAGTTATATGTCCGGAATTCCCGAAGACTTGTGGAAGAGCATG GGCAGCACTGTCGATCCCGGTGTGCTCGCGGCCAGAACCGCCTGGAGAGGAAATTGTCTGCCGTTGCACATGGTT CCAGTGGGAACATTGATCTTCAACTTGGGATTGCGACCCGGGAAGGGTGGTCAATTGTGTCGGAGTGCTGGAACA TATGCTACAGTTGTGGCCAAGGGTAGTGACTCGCGTCAGCAAACGATTCAAAACGAAGAGCCCGAGGCCGAGAAG AAGCCCTTGTCGCAGCGTGACCAGCAGAAGCAGGAGCGTCTGGCCCAGCACATCACTGTCCGTCTCTCAAGTGGA GAGACTCGGCTCATCCACAAGGACTGCTGCGCTACCGTTGGTATTACCAGCAACCCGAACTACCAATACACCCAG CTCGGAAAGGCTGGTCGCTCACGCTGGCTTAACATTCGTCCGACGGTGCGTGGTCTGGCCATGAACGCCATGGAC CATCCCCACGGTGGTGGACGAGGAAAGTCTAAGGGTAACGTCGACCCGAAGAGTCCTTGGGGTATTCCGACCAAA TCCGGCTACAAGACCCGCCCAAAGTGGAAGATCAACAAGGCCGTTGTTCATGCCAGACCTCGCAACCAAGGAAAG CGCCGTCGTGGATACAACTAA
Gene	>Pro_DTO377G3_2\|g3619.t1 ATGCTTCAACCCCGAATTGCCCTACGGGGCATTCGGCTGCCCTTTAGGTGTCTCTCCTCTCTGCCTTTGCCAATC CGAGGCTATTCGACAATCGTGAATGAAATTGAGAAGACCAAGCCCAAGTCTATCGAAACGCCGGCGAACTCTTTT ATTGACCCGAATGTCTCGTTCGCTCCTCCCCCCGGCCGTGATGCTTCTGGCATTCAGCTGCGCACCTACACTCCG CGAACCCCCGGTGTGAGACATCTGCGGCGTCCTGTCAATGATCATTTGTGGAAAGGCCGCCCTGTGCACAAATTA ACATTTCCCAAGCGTGGCCACGCCAAGGGTGGTCGAAACAACTCTGGCCGAGTCACTGTCCGCCATCATGGAGGT GGTGCCAAGCGTCGAATTCGGACGATCGATTTTCTGCGCATGGCTCCGGGGCCGCACACAGTGGAGCGTATCGAG TATGATCCAGGGCGCACAGCGCATATCGCCCTGACTTCTAGTAAGGAGACCGGCAAGTTGAGCTACATTCTCGCC GCGGACGGTATGCGCGCCGGCGACGTGGTCCAGAGTTATATGTCCGGAATTCCCGAAGACTTGTGGAAGAGCATG GGCAGCACTGTCGATCCCGGTGTGCTCGCGGCCAGAACCGCCTGGAGAGGAAATTGTCTGCCGTTGCACATGGTT CCAGTGGGAACATTGATCTTCAACTTGGGATTGCGACCCGGGAAGGGTGGTCAATTGTGTCGGAGTGCTGGAACA TATGCTACAGTTGTGGCCAAGGGTAGTGACTCGCGTCAGCAAACGATTCAAAACGAAGAGCCCGAGGCCGAGAAG AAGCCCTTGTCGCAGCGTGACCAGCAGAAGCAGGAGCGTCTGGCCCAGCACATCACTGTCCGTCTCTCAAGTGGA GAGACTCGGCTCATCCACAAGGACTGCTGCGCTACCGTTGGTATTACCAGCAACCCGAACTACCAATACACCCAG CTCGGAAAGGCTGGTCGCTCACGCTGGCTTAACATTCGTCCGACGGTGCGTGGTCTGGCCATGAACGCCATGGAC CATCCCCACGGTGGTGGACGAGGAAAGTCTAAGGGTAACGTCGACCCGAAGAGTCCTTGGGGTATTCCGGTATGT ATATCCTTTTGTTTTGTATCTTCTGAACTTCCATCGGGCTGACTCTTACTTTTCACCTCTAGACCAAATCCGGCT ACAAGACCCGCCCAAAGTGGAAGATCAACAAGGCCGTTGTTCATGCCAGACCTCGCAACCAAGGAAAGCGCCGTC GTGGATACAACTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences