Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3616.t1
Gene name
Locationscaffold_06:230557..232230
Strand+
Gene length (bp)1673
Transcript length (bp)1365
Coding sequence length (bp)1365
Protein length (aa) 455

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01170 UPF0020 Putative RNA methylase family UPF0020 4.4E-05 186 300

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3616.t1
MDYLVRFAQLHETFRRPELQACATLAGADIEFITYNEYSPYCVVRLPDEAAARAVAKRSILVKDIFELWGEGTNY
EELHADVRRRTQHRWNDYIAVPFKFTIDYFAGTRSLVQKGEIIRSFSYMGFKGPIRLKDPDEEFFVMEEYIDDVE
VSKLGVSRTEDPRKIYLSRKIADSCREDVLKYDLKKRRYISTTSMDAELSLITANMALAAPGKLFFDPFVGTGSF
IVAASHFGALTLGADIDGRSFRGKEKGKLGVYENFDQYGIKSKFIDTFTSDLTNTPLTRTAVLDGIVCDPPYGVR
EGLRVLGNRKGKPAVNVIIDGIPAYLRPGFIAPKRPYGFEALQNDVLNFAVRSLVPNGRLSMWMPTTNDEKTEFP
VPMHQNLEIVSISVQSFNTWARRLITYRRLPEGELSDVTLARKKIDDEGTTADDLNAFRRVHMLRGHGTRVDQDQ
KKTE*
Coding >Pro_DTO377G3_2|g3616.t1
ATGGATTATCTGGTTCGGTTCGCCCAACTCCATGAGACCTTCCGACGGCCGGAACTTCAAGCCTGTGCCACGCTC
GCCGGCGCCGACATCGAATTCATCACCTACAATGAATATTCACCATACTGTGTCGTGAGACTACCAGATGAAGCC
GCGGCGCGGGCAGTTGCCAAGCGCAGTATTCTAGTCAAGGACATCTTCGAGCTTTGGGGCGAAGGCACCAACTAT
GAAGAGCTACATGCAGATGTCCGTCGACGAACTCAGCATCGCTGGAACGACTACATTGCTGTCCCATTCAAATTC
ACAATTGACTACTTTGCAGGAACGCGCAGCCTAGTTCAGAAGGGAGAGATCATTCGATCCTTCTCATATATGGGG
TTCAAAGGCCCGATCCGGCTAAAAGACCCCGATGAGGAGTTTTTTGTGATGGAAGAGTACATCGACGACGTTGAA
GTCTCTAAACTGGGCGTTTCGCGAACGGAAGATCCGCGGAAGATTTATCTCAGTCGCAAGATTGCTGATAGCTGT
CGCGAGGACGTGCTCAAATACGACCTCAAGAAGCGTCGTTATATCAGCACGACTTCCATGGATGCAGAGTTGAGT
CTTATTACGGCGAACATGGCTCTTGCGGCGCCTGGAAAATTGTTCTTTGATCCGTTTGTCGGAACTGGGAGCTTC
ATAGTTGCTGCTTCGCATTTCGGGGCTCTGACTTTGGGTGCAGACATTGATGGTCGCAGCTTCCGTGGCAAAGAG
AAAGGAAAACTGGGCGTATACGAGAACTTCGATCAATATGGGATCAAGAGCAAGTTCATTGATACGTTCACTTCC
GATCTTACCAATACACCACTGACGAGAACCGCCGTGCTGGATGGTATTGTGTGCGATCCGCCATACGGTGTGCGT
GAAGGGCTTCGTGTTTTGGGAAATCGAAAGGGGAAACCTGCGGTCAATGTGATCATTGATGGCATTCCTGCCTAT
CTCCGACCTGGTTTCATTGCTCCCAAAAGGCCGTATGGCTTCGAGGCTCTACAAAACGACGTTCTCAACTTCGCA
GTTCGCTCCTTAGTTCCCAATGGGCGTTTGTCAATGTGGATGCCCACAACAAATGATGAGAAAACCGAGTTCCCT
GTTCCCATGCATCAGAACCTCGAGATCGTCAGTATCTCTGTTCAGAGTTTCAACACTTGGGCTCGCCGACTTATA
ACGTACCGCCGTCTACCTGAGGGAGAACTGTCGGATGTTACACTGGCCCGGAAAAAGATTGACGACGAGGGTACT
ACTGCGGATGACCTCAATGCATTCCGACGAGTGCATATGCTCCGAGGCCACGGCACACGGGTCGATCAGGATCAA
AAAAAGACAGAATAA
Transcript >Pro_DTO377G3_2|g3616.t1
ATGGATTATCTGGTTCGGTTCGCCCAACTCCATGAGACCTTCCGACGGCCGGAACTTCAAGCCTGTGCCACGCTC
GCCGGCGCCGACATCGAATTCATCACCTACAATGAATATTCACCATACTGTGTCGTGAGACTACCAGATGAAGCC
GCGGCGCGGGCAGTTGCCAAGCGCAGTATTCTAGTCAAGGACATCTTCGAGCTTTGGGGCGAAGGCACCAACTAT
GAAGAGCTACATGCAGATGTCCGTCGACGAACTCAGCATCGCTGGAACGACTACATTGCTGTCCCATTCAAATTC
ACAATTGACTACTTTGCAGGAACGCGCAGCCTAGTTCAGAAGGGAGAGATCATTCGATCCTTCTCATATATGGGG
TTCAAAGGCCCGATCCGGCTAAAAGACCCCGATGAGGAGTTTTTTGTGATGGAAGAGTACATCGACGACGTTGAA
GTCTCTAAACTGGGCGTTTCGCGAACGGAAGATCCGCGGAAGATTTATCTCAGTCGCAAGATTGCTGATAGCTGT
CGCGAGGACGTGCTCAAATACGACCTCAAGAAGCGTCGTTATATCAGCACGACTTCCATGGATGCAGAGTTGAGT
CTTATTACGGCGAACATGGCTCTTGCGGCGCCTGGAAAATTGTTCTTTGATCCGTTTGTCGGAACTGGGAGCTTC
ATAGTTGCTGCTTCGCATTTCGGGGCTCTGACTTTGGGTGCAGACATTGATGGTCGCAGCTTCCGTGGCAAAGAG
AAAGGAAAACTGGGCGTATACGAGAACTTCGATCAATATGGGATCAAGAGCAAGTTCATTGATACGTTCACTTCC
GATCTTACCAATACACCACTGACGAGAACCGCCGTGCTGGATGGTATTGTGTGCGATCCGCCATACGGTGTGCGT
GAAGGGCTTCGTGTTTTGGGAAATCGAAAGGGGAAACCTGCGGTCAATGTGATCATTGATGGCATTCCTGCCTAT
CTCCGACCTGGTTTCATTGCTCCCAAAAGGCCGTATGGCTTCGAGGCTCTACAAAACGACGTTCTCAACTTCGCA
GTTCGCTCCTTAGTTCCCAATGGGCGTTTGTCAATGTGGATGCCCACAACAAATGATGAGAAAACCGAGTTCCCT
GTTCCCATGCATCAGAACCTCGAGATCGTCAGTATCTCTGTTCAGAGTTTCAACACTTGGGCTCGCCGACTTATA
ACGTACCGCCGTCTACCTGAGGGAGAACTGTCGGATGTTACACTGGCCCGGAAAAAGATTGACGACGAGGGTACT
ACTGCGGATGACCTCAATGCATTCCGACGAGTGCATATGCTCCGAGGCCACGGCACACGGGTCGATCAGGATCAA
AAAAAGACAGAATAA
Gene >Pro_DTO377G3_2|g3616.t1
ATGGATTATCTGGTTCGGTTCGCCCAACTCCATGAGACCTTCCGACGGCCGGAACTTCAAGCCTGTGCCACGCTC
GCCGGCGCCGACATCGAATTCATCACCTACAATGAATATGTATGATACCCTTTCTATCAATACTGGGATCGTCAT
TTGTCCATACTCCATGAATATTGGTCCACAACGATGTCACCCTTCCTCTCTCTATCCTTTCATGACTATCCTCAA
TTTGCAGAATTTTGACTGATATCCCTAGTCACCATACTGTGTCGTGAGACTACCAGATGAAGCCGCGGCGCGGGC
AGTTGCCAAGCGCAGTATTCTAGTCAAGGACATCTTCGAGCTTTGGGGCGAAGGCACCAACTATGAAGAGCTACA
TGCAGATGTCCGTCGACGAACTCAGCATCGCTGGAACGACTACATTGCTGTCCCATTCAAATTCACAATTGACTA
CTTTGCAGGAACGCGCAGCCTAGTTCAGAAGGGAGAGATCATTCGATCCTTCTCATATATGGGGTTCAAAGGCCC
GATCCGGCTAAAAGACCCCGATGAGGAGTTTTTTGTGATGGAAGAGTACATCGACGACGTTGAAGTCTCTAAACT
GGGCGTTTCGCGAACGGAAGATCCGCGGAAGATTTATCTCAGTCGCAAGATTGCTGATAGCTGTCGCGAGGACGT
GCTCAAATACGACCTCAAGAAGCGTCGTTATATCAGCACGACTTCCATGGATGCAGAGTTGAGTCTTATTACGGC
GAACATGGCTCTTGCGGCGCCTGGAAAATTGTTCTTTGATCCGTTTGTCGGAACTGGGAGCTTCATAGTTGCTGC
TTCGCATTTCGGGGCTCTGACTTTGGGTGCAGACATTGATGGTCGCAGCTTCCGTGGCAAAGAGAAAGGAAAACT
GGGCGTATACGAGAACTTCGATCAATATGGGATCAAGAGCAAGTTCATTGATACGTTCACTTCCGATCTTACCAA
TACACCACTGACGAGAACCGCCGTGCTGGATGGTATTGTGTGCGATCCGCCATACGGTGTGCGTGAAGGGCTTCG
TGTTTTGGGAAATCGAAAGGGGAAACCTGCGGTCAATGTGATCATTGATGGCATTCCTGCCTATCTGTATGTGTT
CTTGCTTCTCCTCTCCGACTTGAAATACTGACTTTAACCTGTAGCCGACCTGGTTTCATTGCTCCCAAAAGGCCG
TATGGCTTCGAGGCTCTACAAAACGACGTTCTCAACTTCGCAGTTCGCTCCTTAGTTCCCAATGGGCGTTTGTCA
ATGTGGATGCCCACAACAAATGATGAGAAAACCGAGTTCCCTGTTCCCATGCATCAGAACCTCGAGATCGTCAGT
ATCTCTGTTCAGAGTTTCAACACTTGTAAGTGACAGCCTTGTGCTACAACCATGTCGAAAGGCATCGGCTGATTT
TATATCTTACAGGGGCTCGCCGACTTATAACGTACCGCCGTCTACCTGAGGGAGAACTGTCGGATGTTACACTGG
CCCGGAAAAAGATTGACGACGAGGGTACTACTGCGGATGACCTCAATGCATTCCGACGAGTGGTACGTATTATTT
GGGAGTTGATGACTTACTACCCGGCTAACTTGTCGAACTAGCATATGCTCCGAGGCCACGGCACACGGGTCGATC
AGGATCAAAAAAAGACAGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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