Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g3607.t1
Gene name
Location	scaffold_06:211097..211924
Strand	-
Gene length (bp)	827
Transcript length (bp)	708
Coding sequence length (bp)	708
Protein length (aa)	236

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01202	SKI	Shikimate kinase	1.8E-11	62	225
PF13238	AAA_18	AAA domain	5.2E-08	56	187
PF13671	AAA_33	AAA domain	7.0E-07	55	190
PF03215	Rad17	Rad17 P-loop domain	1.6E-05	48	80

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	340
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g4515.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g1773.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g1960.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g1800.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g7464.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g6327.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g4226.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g3568.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g5666.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g3382.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g10236.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g10306.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g2924.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g5822.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g3980.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g358.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g3940.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g6284.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g5722.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g4816.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g5173.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g6295.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g9751.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g3305.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g5336.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g2390.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g7496.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g7659.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g6141.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g2486.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g5130.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g3586.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g4024.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g5242.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g3607.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g3607.t1 MLSAGERPQPPQAPAIVDSTASKARIMPDLANGTNGTNGVTSTTPSKPAKQQHIWVVTGPAGCGKSTVGNVLRKE LGIPFLEGDDYHPAANKEKMGEGIPLTDEDRWDWLISLRQAAIDVLSPSKANNFHPPDGVVVACSALKQKYRDVM RVAAYGSPSVHIHFIYLKLKEDVLMERVAHRESHYMKSGMVHSQLAVLEEPKDEWDAITINVEGTMEEVQQNVIH AVTDKLAEYK*
Coding	>Pro_DTO377G3_2|g3607.t1 ATGCTCTCCGCAGGAGAACGACCACAGCCTCCCCAAGCTCCCGCCATAGTAGATTCCACCGCAAGCAAGGCGCGC ATCATGCCGGACCTCGCCAACGGCACCAACGGAACCAACGGAGTGACGTCCACTACGCCCTCCAAACCCGCGAAA CAGCAACATATCTGGGTCGTGACCGGTCCAGCAGGGTGCGGAAAAAGCACCGTGGGCAACGTCCTACGCAAGGAG CTTGGTATTCCATTTCTAGAAGGCGACGACTACCACCCCGCAGCCAACAAAGAAAAAATGGGCGAAGGCATCCCA CTCACAGACGAAGACCGCTGGGACTGGCTGATCTCCCTGCGCCAAGCCGCAATCGACGTGCTCTCCCCTTCGAAA GCCAACAACTTCCACCCACCCGACGGCGTGGTAGTAGCGTGCTCCGCGCTGAAGCAGAAGTACCGGGATGTGATG CGCGTTGCTGCGTACGGCTCGCCCTCGGTGCATATTCACTTCATCTACCTCAAGCTCAAGGAGGATGTGCTGATG GAGCGCGTCGCCCATCGCGAATCACACTACATGAAGAGTGGTATGGTACACTCGCAGCTGGCGGTTCTTGAGGAG CCCAAGGACGAGTGGGATGCTATTACTATCAATGTTGAGGGCACGATGGAGGAGGTGCAGCAGAATGTTATTCAT GCTGTTACTGATAAGCTTGCTGAGTATAAATGA
Transcript	>Pro_DTO377G3_2|g3607.t1 ATGCTCTCCGCAGGAGAACGACCACAGCCTCCCCAAGCTCCCGCCATAGTAGATTCCACCGCAAGCAAGGCGCGC ATCATGCCGGACCTCGCCAACGGCACCAACGGAACCAACGGAGTGACGTCCACTACGCCCTCCAAACCCGCGAAA CAGCAACATATCTGGGTCGTGACCGGTCCAGCAGGGTGCGGAAAAAGCACCGTGGGCAACGTCCTACGCAAGGAG CTTGGTATTCCATTTCTAGAAGGCGACGACTACCACCCCGCAGCCAACAAAGAAAAAATGGGCGAAGGCATCCCA CTCACAGACGAAGACCGCTGGGACTGGCTGATCTCCCTGCGCCAAGCCGCAATCGACGTGCTCTCCCCTTCGAAA GCCAACAACTTCCACCCACCCGACGGCGTGGTAGTAGCGTGCTCCGCGCTGAAGCAGAAGTACCGGGATGTGATG CGCGTTGCTGCGTACGGCTCGCCCTCGGTGCATATTCACTTCATCTACCTCAAGCTCAAGGAGGATGTGCTGATG GAGCGCGTCGCCCATCGCGAATCACACTACATGAAGAGTGGTATGGTACACTCGCAGCTGGCGGTTCTTGAGGAG CCCAAGGACGAGTGGGATGCTATTACTATCAATGTTGAGGGCACGATGGAGGAGGTGCAGCAGAATGTTATTCAT GCTGTTACTGATAAGCTTGCTGAGTATAAATGA
Gene	>Pro_DTO377G3_2|g3607.t1 ATGCTCTCCGCAGGAGAACGACCACAGCCTCCCCAAGCTCCCGCCATAGTAGATTCCACCGCAAGCAAGGCGCGC ATCATGCCGGACCTCGCCAACGGCACCAACGGAACCAACGGAGTGACGTCCACTACGCCCTCCAAACCCGCGAAA CAGCAACATATCTGGGTCGTGACCGGTCCAGCAGGGTGCGGAAAAAGCACCGTGGGCAACGTCCTACGCAAGGAG CTTGGTATTCCATTTCTAGAAGGCGACGACGTAAGTACCCAAGTACCTGAATGCACCACACCCTACACTCCACAC ACCCCCAAACCACCCAATTGCGCCCAAACCCAACAATCACCCAAGTATACACAAATAACTAACACAACCCTCAGT ACCACCCCGCAGCCAACAAAGAAAAAATGGGCGAAGGCATCCCACTCACAGACGAAGACCGCTGGGACTGGCTGA TCTCCCTGCGCCAAGCCGCAATCGACGTGCTCTCCCCTTCGAAAGCCAACAACTTCCACCCACCCGACGGCGTGG TAGTAGCGTGCTCCGCGCTGAAGCAGAAGTACCGGGATGTGATGCGCGTTGCTGCGTACGGCTCGCCCTCGGTGC ATATTCACTTCATCTACCTCAAGCTCAAGGAGGATGTGCTGATGGAGCGCGTCGCCCATCGCGAATCACACTACA TGAAGAGTGGTATGGTACACTCGCAGCTGGCGGTTCTTGAGGAGCCCAAGGACGAGTGGGATGCTATTACTATCA ATGTTGAGGGCACGATGGAGGAGGTGCAGCAGAATGTTATTCATGCTGTTACTGATAAGCTTGCTGAGTATAAAT GA