Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3607.t1
Gene name
Locationscaffold_06:211097..211924
Strand-
Gene length (bp)827
Transcript length (bp)708
Coding sequence length (bp)708
Protein length (aa) 236

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01202 SKI Shikimate kinase 1.8E-11 62 225
PF13238 AAA_18 AAA domain 5.2E-08 56 187
PF13671 AAA_33 AAA domain 7.0E-07 55 190
PF03215 Rad17 Rad17 P-loop domain 1.6E-05 48 80

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3607.t1
MLSAGERPQPPQAPAIVDSTASKARIMPDLANGTNGTNGVTSTTPSKPAKQQHIWVVTGPAGCGKSTVGNVLRKE
LGIPFLEGDDYHPAANKEKMGEGIPLTDEDRWDWLISLRQAAIDVLSPSKANNFHPPDGVVVACSALKQKYRDVM
RVAAYGSPSVHIHFIYLKLKEDVLMERVAHRESHYMKSGMVHSQLAVLEEPKDEWDAITINVEGTMEEVQQNVIH
AVTDKLAEYK*
Coding >Pro_DTO377G3_2|g3607.t1
ATGCTCTCCGCAGGAGAACGACCACAGCCTCCCCAAGCTCCCGCCATAGTAGATTCCACCGCAAGCAAGGCGCGC
ATCATGCCGGACCTCGCCAACGGCACCAACGGAACCAACGGAGTGACGTCCACTACGCCCTCCAAACCCGCGAAA
CAGCAACATATCTGGGTCGTGACCGGTCCAGCAGGGTGCGGAAAAAGCACCGTGGGCAACGTCCTACGCAAGGAG
CTTGGTATTCCATTTCTAGAAGGCGACGACTACCACCCCGCAGCCAACAAAGAAAAAATGGGCGAAGGCATCCCA
CTCACAGACGAAGACCGCTGGGACTGGCTGATCTCCCTGCGCCAAGCCGCAATCGACGTGCTCTCCCCTTCGAAA
GCCAACAACTTCCACCCACCCGACGGCGTGGTAGTAGCGTGCTCCGCGCTGAAGCAGAAGTACCGGGATGTGATG
CGCGTTGCTGCGTACGGCTCGCCCTCGGTGCATATTCACTTCATCTACCTCAAGCTCAAGGAGGATGTGCTGATG
GAGCGCGTCGCCCATCGCGAATCACACTACATGAAGAGTGGTATGGTACACTCGCAGCTGGCGGTTCTTGAGGAG
CCCAAGGACGAGTGGGATGCTATTACTATCAATGTTGAGGGCACGATGGAGGAGGTGCAGCAGAATGTTATTCAT
GCTGTTACTGATAAGCTTGCTGAGTATAAATGA
Transcript >Pro_DTO377G3_2|g3607.t1
ATGCTCTCCGCAGGAGAACGACCACAGCCTCCCCAAGCTCCCGCCATAGTAGATTCCACCGCAAGCAAGGCGCGC
ATCATGCCGGACCTCGCCAACGGCACCAACGGAACCAACGGAGTGACGTCCACTACGCCCTCCAAACCCGCGAAA
CAGCAACATATCTGGGTCGTGACCGGTCCAGCAGGGTGCGGAAAAAGCACCGTGGGCAACGTCCTACGCAAGGAG
CTTGGTATTCCATTTCTAGAAGGCGACGACTACCACCCCGCAGCCAACAAAGAAAAAATGGGCGAAGGCATCCCA
CTCACAGACGAAGACCGCTGGGACTGGCTGATCTCCCTGCGCCAAGCCGCAATCGACGTGCTCTCCCCTTCGAAA
GCCAACAACTTCCACCCACCCGACGGCGTGGTAGTAGCGTGCTCCGCGCTGAAGCAGAAGTACCGGGATGTGATG
CGCGTTGCTGCGTACGGCTCGCCCTCGGTGCATATTCACTTCATCTACCTCAAGCTCAAGGAGGATGTGCTGATG
GAGCGCGTCGCCCATCGCGAATCACACTACATGAAGAGTGGTATGGTACACTCGCAGCTGGCGGTTCTTGAGGAG
CCCAAGGACGAGTGGGATGCTATTACTATCAATGTTGAGGGCACGATGGAGGAGGTGCAGCAGAATGTTATTCAT
GCTGTTACTGATAAGCTTGCTGAGTATAAATGA
Gene >Pro_DTO377G3_2|g3607.t1
ATGCTCTCCGCAGGAGAACGACCACAGCCTCCCCAAGCTCCCGCCATAGTAGATTCCACCGCAAGCAAGGCGCGC
ATCATGCCGGACCTCGCCAACGGCACCAACGGAACCAACGGAGTGACGTCCACTACGCCCTCCAAACCCGCGAAA
CAGCAACATATCTGGGTCGTGACCGGTCCAGCAGGGTGCGGAAAAAGCACCGTGGGCAACGTCCTACGCAAGGAG
CTTGGTATTCCATTTCTAGAAGGCGACGACGTAAGTACCCAAGTACCTGAATGCACCACACCCTACACTCCACAC
ACCCCCAAACCACCCAATTGCGCCCAAACCCAACAATCACCCAAGTATACACAAATAACTAACACAACCCTCAGT
ACCACCCCGCAGCCAACAAAGAAAAAATGGGCGAAGGCATCCCACTCACAGACGAAGACCGCTGGGACTGGCTGA
TCTCCCTGCGCCAAGCCGCAATCGACGTGCTCTCCCCTTCGAAAGCCAACAACTTCCACCCACCCGACGGCGTGG
TAGTAGCGTGCTCCGCGCTGAAGCAGAAGTACCGGGATGTGATGCGCGTTGCTGCGTACGGCTCGCCCTCGGTGC
ATATTCACTTCATCTACCTCAAGCTCAAGGAGGATGTGCTGATGGAGCGCGTCGCCCATCGCGAATCACACTACA
TGAAGAGTGGTATGGTACACTCGCAGCTGGCGGTTCTTGAGGAGCCCAAGGACGAGTGGGATGCTATTACTATCA
ATGTTGAGGGCACGATGGAGGAGGTGCAGCAGAATGTTATTCATGCTGTTACTGATAAGCTTGCTGAGTATAAAT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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