Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3603.t1
Gene name
Locationscaffold_06:203896..204779
Strand-
Gene length (bp)883
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 1.1E-11 4 52
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 5.4E-11 61 105
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 8.1E-14 116 158
PF13921 Myb_DNA-bind_6 Myb-like DNA-binding domain 1.8E-12 7 69
PF13921 Myb_DNA-bind_6 Myb-like DNA-binding domain 8.8E-09 64 112
PF13921 Myb_DNA-bind_6 Myb-like DNA-binding domain 2.1E-10 117 171

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3603.t1
MSPRRPWSKSEDEKLIKLIGQFGDQRGRNSKWQEISRNLPGRTNKDCRKRWFHSLDPSLRKGRWTKDEDRLLLDA
YQRIGPAWKDIALLIKGRKDDQCAKRYNDILNPQVQNRLKVWTPEEDQYLAAKVKQLGHKWTVIAAGLPGRPPLT
CRNRWRKLARNICSDIGFSQENSPMPQSSTENSRTSPSSQNSEIFISSPDASSDPTTIDLLDASLASTALPSDSS
PLDVMSYHQFRDRWNLLYGLASAPGKR*
Coding >Pro_DTO377G3_2|g3603.t1
ATGTCTCCTCGACGTCCCTGGTCTAAATCGGAAGACGAAAAATTGATCAAGCTCATCGGGCAGTTTGGGGACCAA
CGGGGCAGAAACAGCAAATGGCAAGAGATCTCCAGAAATTTACCCGGGAGAACGAATAAGGATTGTCGGAAGCGT
TGGTTTCATTCTTTAGATCCTTCTCTTCGCAAAGGACGCTGGACAAAGGATGAAGATAGGCTCTTGCTTGATGCC
TATCAACGAATTGGGCCTGCTTGGAAGGATATAGCACTTCTCATCAAAGGACGAAAGGATGATCAATGTGCGAAA
AGATACAATGACATCCTTAATCCACAAGTGCAAAATCGTCTCAAAGTCTGGACACCCGAGGAAGATCAATATTTG
GCGGCCAAAGTGAAACAACTGGGTCATAAATGGACTGTCATTGCAGCAGGCCTACCTGGTCGTCCTCCGCTGACC
TGCCGGAATCGATGGAGAAAACTGGCCAGAAATATCTGTAGTGACATTGGTTTCTCTCAGGAAAATTCGCCAATG
CCCCAATCCTCTACGGAGAATTCAAGGACTTCGCCGTCGTCTCAGAACTCCGAGATCTTCATTTCGTCTCCTGAC
GCATCGTCTGACCCCACCACTATCGACCTCCTAGATGCCTCTCTGGCATCTACCGCTCTGCCTTCTGATTCTTCC
CCTTTGGATGTCATGTCATATCATCAATTCCGTGATCGTTGGAATCTCCTATACGGACTGGCCAGCGCACCAGGC
AAGCGCTAA
Transcript >Pro_DTO377G3_2|g3603.t1
ATGTCTCCTCGACGTCCCTGGTCTAAATCGGAAGACGAAAAATTGATCAAGCTCATCGGGCAGTTTGGGGACCAA
CGGGGCAGAAACAGCAAATGGCAAGAGATCTCCAGAAATTTACCCGGGAGAACGAATAAGGATTGTCGGAAGCGT
TGGTTTCATTCTTTAGATCCTTCTCTTCGCAAAGGACGCTGGACAAAGGATGAAGATAGGCTCTTGCTTGATGCC
TATCAACGAATTGGGCCTGCTTGGAAGGATATAGCACTTCTCATCAAAGGACGAAAGGATGATCAATGTGCGAAA
AGATACAATGACATCCTTAATCCACAAGTGCAAAATCGTCTCAAAGTCTGGACACCCGAGGAAGATCAATATTTG
GCGGCCAAAGTGAAACAACTGGGTCATAAATGGACTGTCATTGCAGCAGGCCTACCTGGTCGTCCTCCGCTGACC
TGCCGGAATCGATGGAGAAAACTGGCCAGAAATATCTGTAGTGACATTGGTTTCTCTCAGGAAAATTCGCCAATG
CCCCAATCCTCTACGGAGAATTCAAGGACTTCGCCGTCGTCTCAGAACTCCGAGATCTTCATTTCGTCTCCTGAC
GCATCGTCTGACCCCACCACTATCGACCTCCTAGATGCCTCTCTGGCATCTACCGCTCTGCCTTCTGATTCTTCC
CCTTTGGATGTCATGTCATATCATCAATTCCGTGATCGTTGGAATCTCCTATACGGACTGGCCAGCGCACCAGGC
AAGCGCTAA
Gene >Pro_DTO377G3_2|g3603.t1
ATGTCTCCTCGACGTCCCTGGTCTAAATCGGAAGACGAAAAATTGATCAAGCTCATCGGGCAGTTTGGGGACCAA
CGGGGCAGAAACAGCAAATGGCAAGAGATCTCCAGAAATTTACCCGGGAGAACGAATAAGGTAGGTCCTCTTCTT
TTATGCATCGGGCTGGCGTGCCAGAGCATCGCTGATATCACCATATTCACAAGGATTGTCGGAAGCGTTGGTTTC
ATTCTTTAGATCCTTCTCTTCGCAAAGGACGCTGGACAAAGGATGAAGATAGGCTCTTGCTTGATGCCTATCAAC
GAATTGGGCCTGCTTGGAAGGATATAGGTAAGTTTTTTTCTATCCAATACTCTTACATGTCCGGCGGCTAAGTGT
ACCTCTAGCACTTCTCATCAAAGGACGAAAGGATGATCAATGTGCGAAAAGATACAATGACATCCTTAATCCACA
AGTGCAAAATCGTCTCAAAGTCTGGACACCCGAGGAAGATCAATATTTGGCGGCCAAAGTGAAACAACTGGGTCA
TAAATGGACTGTCATTGCAGCAGGCCTACCTGGTCGTCCTCCGCTGACCTGCCGGAATCGATGGAGAAAACTGGC
CAGAAATATCTGTAGTGACATTGGTTTCTCTCAGGAAAATTCGCCAATGCCCCAATCCTCTACGGAGAATTCAAG
GACTTCGCCGTCGTCTCAGAACTCCGAGATCTTCATTTCGTCTCCTGACGCATCGTCTGACCCCACCACTATCGA
CCTCCTAGATGCCTCTCTGGCATCTACCGCTCTGCCTTCTGATTCTTCCCCTTTGGATGTCATGTCATATCATCA
ATTCCGTGATCGTTGGAATCTCCTATACGGACTGGCCAGCGCACCAGGCAAGCGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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