© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3603.t1 |
| Gene name | |
| Location | scaffold_06:203896..204779 |
| Strand | - |
| Gene length (bp) | 883 |
| Transcript length (bp) | 759 |
| Coding sequence length (bp) | 759 |
| Protein length (aa) | 253 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 1.1E-11 | 4 | 52 |
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 5.0E-11 | 61 | 106 |
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 8.2E-14 | 116 | 158 |
| PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 2.0E-12 | 7 | 69 |
| PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 9.7E-09 | 64 | 112 |
| PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 2.3E-10 | 117 | 171 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3603.t1 MSPRRPWSKSEDEKLIKLIGQFGDQRGRNSKWQEISRNLPGRTNKDCRKRWFHSLDPSLRKGRWTKDEDRLLLDA YQRIGPAWKDIALLIKGRKDDQCAKRYNDILNPQVQNRLKVWTPEEDQYLAAKVKQLGHKWTVIAAGLPGRPPLT CRNRWRKLARNICSDIGFSQENSPMPQSSTENSRTSPSSQNSEIFISSPDASSDPTTIDLLDASLASTALPSDSS PLDVMSYHQFRDRWNLLYGLASAPGKR* |
| Coding | >Pro_DTO377G3_2|g3603.t1 ATGTCTCCTCGACGTCCCTGGTCTAAATCGGAAGACGAAAAATTGATCAAGCTCATCGGGCAGTTTGGGGACCAA CGGGGCAGAAACAGCAAATGGCAAGAGATCTCCAGAAATTTACCCGGGAGAACGAATAAGGATTGTCGGAAGCGT TGGTTTCATTCTTTAGATCCTTCTCTTCGCAAAGGACGCTGGACAAAGGATGAAGATAGGCTCTTGCTTGATGCC TATCAACGAATTGGGCCTGCTTGGAAGGATATAGCACTTCTCATCAAAGGACGAAAGGATGATCAATGTGCGAAA AGATACAATGACATCCTTAATCCACAAGTGCAAAATCGTCTCAAAGTCTGGACACCCGAGGAAGATCAATATTTG GCGGCCAAAGTGAAACAACTGGGTCATAAATGGACTGTCATTGCAGCAGGCCTACCTGGTCGTCCTCCGCTGACC TGCCGGAATCGATGGAGAAAACTGGCCAGAAATATCTGTAGTGACATTGGTTTCTCTCAGGAAAATTCGCCAATG CCCCAATCCTCTACGGAGAATTCAAGGACTTCGCCGTCGTCTCAGAACTCCGAGATCTTCATTTCGTCTCCTGAC GCATCGTCTGACCCCACCACTATCGACCTCCTAGATGCCTCTCTGGCATCTACCGCTCTGCCTTCTGATTCTTCC CCTTTGGATGTCATGTCATATCATCAATTCCGTGATCGTTGGAATCTCCTATACGGACTGGCCAGCGCACCAGGC AAGCGCTAA |
| Transcript | >Pro_DTO377G3_2|g3603.t1 ATGTCTCCTCGACGTCCCTGGTCTAAATCGGAAGACGAAAAATTGATCAAGCTCATCGGGCAGTTTGGGGACCAA CGGGGCAGAAACAGCAAATGGCAAGAGATCTCCAGAAATTTACCCGGGAGAACGAATAAGGATTGTCGGAAGCGT TGGTTTCATTCTTTAGATCCTTCTCTTCGCAAAGGACGCTGGACAAAGGATGAAGATAGGCTCTTGCTTGATGCC TATCAACGAATTGGGCCTGCTTGGAAGGATATAGCACTTCTCATCAAAGGACGAAAGGATGATCAATGTGCGAAA AGATACAATGACATCCTTAATCCACAAGTGCAAAATCGTCTCAAAGTCTGGACACCCGAGGAAGATCAATATTTG GCGGCCAAAGTGAAACAACTGGGTCATAAATGGACTGTCATTGCAGCAGGCCTACCTGGTCGTCCTCCGCTGACC TGCCGGAATCGATGGAGAAAACTGGCCAGAAATATCTGTAGTGACATTGGTTTCTCTCAGGAAAATTCGCCAATG CCCCAATCCTCTACGGAGAATTCAAGGACTTCGCCGTCGTCTCAGAACTCCGAGATCTTCATTTCGTCTCCTGAC GCATCGTCTGACCCCACCACTATCGACCTCCTAGATGCCTCTCTGGCATCTACCGCTCTGCCTTCTGATTCTTCC CCTTTGGATGTCATGTCATATCATCAATTCCGTGATCGTTGGAATCTCCTATACGGACTGGCCAGCGCACCAGGC AAGCGCTAA |
| Gene | >Pro_DTO377G3_2|g3603.t1 ATGTCTCCTCGACGTCCCTGGTCTAAATCGGAAGACGAAAAATTGATCAAGCTCATCGGGCAGTTTGGGGACCAA CGGGGCAGAAACAGCAAATGGCAAGAGATCTCCAGAAATTTACCCGGGAGAACGAATAAGGTAGGTCCTCTTCTT TTATGCATCGGGCTGGCGTGCCAGAGCATCGCTGATATCACCATATTCACAAGGATTGTCGGAAGCGTTGGTTTC ATTCTTTAGATCCTTCTCTTCGCAAAGGACGCTGGACAAAGGATGAAGATAGGCTCTTGCTTGATGCCTATCAAC GAATTGGGCCTGCTTGGAAGGATATAGGTAAGTTTTTTTCTATCCAATACTCTTACATGTCCGGCGGCTAAGTGT ACCTCTAGCACTTCTCATCAAAGGACGAAAGGATGATCAATGTGCGAAAAGATACAATGACATCCTTAATCCACA AGTGCAAAATCGTCTCAAAGTCTGGACACCCGAGGAAGATCAATATTTGGCGGCCAAAGTGAAACAACTGGGTCA TAAATGGACTGTCATTGCAGCAGGCCTACCTGGTCGTCCTCCGCTGACCTGCCGGAATCGATGGAGAAAACTGGC CAGAAATATCTGTAGTGACATTGGTTTCTCTCAGGAAAATTCGCCAATGCCCCAATCCTCTACGGAGAATTCAAG GACTTCGCCGTCGTCTCAGAACTCCGAGATCTTCATTTCGTCTCCTGACGCATCGTCTGACCCCACCACTATCGA CCTCCTAGATGCCTCTCTGGCATCTACCGCTCTGCCTTCTGATTCTTCCCCTTTGGATGTCATGTCATATCATCA ATTCCGTGATCGTTGGAATCTCCTATACGGACTGGCCAGCGCACCAGGCAAGCGCTAA |