Protein ID | Pro_DTO377G3_2|g3586.t1 |
Gene name | |
Location | scaffold_06:163955..164737 |
Strand | - |
Gene length (bp) | 782 |
Transcript length (bp) | 705 |
Coding sequence length (bp) | 705 |
Protein length (aa) | 235 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16835 | SF3A2 | Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) | 3.3E-36 | 115 | 209 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 1.6E-05 | 54 | 78 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3586.t1 MDYQNRAGSKFGGGGVASQSATNADRRERLRRIAMETMDIEKDPYIFKNNVGTFECRLCLTVHQNDGSYLAHTQG RKHQTNLERRAAREDREGKKDQSTLPGVAGVQVKKQLIKIGRPGYKITKIRDPLTRQNGMLFQLQFQEITPGVKP RVRFMSAFEQQVETPDKNYQYLVVAAEPYQNSAFKIQAKEIDRRDENYWTWFDEDSKEFWIQILFKTEREEIFSG VPGLAPSQT* |
Coding | >Pro_DTO377G3_2|g3586.t1 ATGGATTACCAGAACAGAGCTGGTTCCAAGTTCGGCGGCGGCGGCGTCGCCTCCCAATCTGCCACCAACGCCGAC CGACGTGAGCGACTTCGCAGAATCGCCATGGAGACTATGGATATCGAGAAAGATCCCTACATCTTCAAGAACAAC GTGGGCACTTTCGAATGCCGTCTCTGCCTGACAGTCCACCAGAACGACGGCTCCTACCTCGCCCACACCCAGGGC CGCAAGCACCAGACCAATCTGGAGCGACGCGCTGCCCGCGAGGACCGGGAAGGCAAAAAGGATCAATCCACCTTG CCTGGTGTCGCCGGTGTTCAGGTCAAGAAGCAGCTGATCAAGATCGGCCGACCTGGTTACAAGATCACCAAGATC CGCGACCCATTGACTCGCCAGAACGGAATGTTGTTCCAGCTGCAGTTCCAGGAGATCACTCCGGGCGTCAAGCCC CGTGTGCGCTTCATGTCGGCCTTTGAGCAGCAGGTCGAGACTCCCGACAAGAACTACCAGTACCTGGTGGTTGCC GCCGAACCCTACCAGAACAGTGCGTTCAAGATCCAGGCGAAGGAGATCGATCGCCGCGACGAGAACTACTGGACC TGGTTCGACGAGGACAGCAAGGAGTTCTGGATCCAGATCCTGTTCAAGACTGAGCGTGAGGAGATCTTCAGCGGT GTTCCTGGTCTCGCGCCCTCCCAGACCTGA |
Transcript | >Pro_DTO377G3_2|g3586.t1 ATGGATTACCAGAACAGAGCTGGTTCCAAGTTCGGCGGCGGCGGCGTCGCCTCCCAATCTGCCACCAACGCCGAC CGACGTGAGCGACTTCGCAGAATCGCCATGGAGACTATGGATATCGAGAAAGATCCCTACATCTTCAAGAACAAC GTGGGCACTTTCGAATGCCGTCTCTGCCTGACAGTCCACCAGAACGACGGCTCCTACCTCGCCCACACCCAGGGC CGCAAGCACCAGACCAATCTGGAGCGACGCGCTGCCCGCGAGGACCGGGAAGGCAAAAAGGATCAATCCACCTTG CCTGGTGTCGCCGGTGTTCAGGTCAAGAAGCAGCTGATCAAGATCGGCCGACCTGGTTACAAGATCACCAAGATC CGCGACCCATTGACTCGCCAGAACGGAATGTTGTTCCAGCTGCAGTTCCAGGAGATCACTCCGGGCGTCAAGCCC CGTGTGCGCTTCATGTCGGCCTTTGAGCAGCAGGTCGAGACTCCCGACAAGAACTACCAGTACCTGGTGGTTGCC GCCGAACCCTACCAGAACAGTGCGTTCAAGATCCAGGCGAAGGAGATCGATCGCCGCGACGAGAACTACTGGACC TGGTTCGACGAGGACAGCAAGGAGTTCTGGATCCAGATCCTGTTCAAGACTGAGCGTGAGGAGATCTTCAGCGGT GTTCCTGGTCTCGCGCCCTCCCAGACCTGA |
Gene | >Pro_DTO377G3_2|g3586.t1 ATGGATTACCAGGTACGTACACGCTGACTTAGCCCGCGCGGCTTCATCTCTTTCATCAAGAAAGAGCTTATCGCT GACACATCCCGCAGAACAGAGCTGGTTCCAAGTTCGGCGGCGGCGGCGTCGCCTCCCAATCTGCCACCAACGCCG ACCGACGTGAGCGACTTCGCAGAATCGCCATGGAGACTATGGATATCGAGAAAGATCCCTACATCTTCAAGAACA ACGTGGGCACTTTCGAATGCCGTCTCTGCCTGACAGTCCACCAGAACGACGGCTCCTACCTCGCCCACACCCAGG GCCGCAAGCACCAGACCAATCTGGAGCGACGCGCTGCCCGCGAGGACCGGGAAGGCAAAAAGGATCAATCCACCT TGCCTGGTGTCGCCGGTGTTCAGGTCAAGAAGCAGCTGATCAAGATCGGCCGACCTGGTTACAAGATCACCAAGA TCCGCGACCCATTGACTCGCCAGAACGGAATGTTGTTCCAGCTGCAGTTCCAGGAGATCACTCCGGGCGTCAAGC CCCGTGTGCGCTTCATGTCGGCCTTTGAGCAGCAGGTCGAGACTCCCGACAAGAACTACCAGTACCTGGTGGTTG CCGCCGAACCCTACCAGAACAGTGCGTTCAAGATCCAGGCGAAGGAGATCGATCGCCGCGACGAGAACTACTGGA CCTGGTTCGACGAGGACAGCAAGGAGTTCTGGATCCAGATCCTGTTCAAGACTGAGCGTGAGGAGATCTTCAGCG GTGTTCCTGGTCTCGCGCCCTCCCAGACCTGA |