Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3583.t1
Gene name
Locationscaffold_06:152397..153314
Strand+
Gene length (bp)917
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06220 zf-U1 U1 zinc finger 3.2E-06 9 43

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0043167 ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3583.t1
MSEFWKSAPRYWCKQCKVFIRDTPFEKTQHEASPKHQGNLKRFLRQIHNDNEQKQRDSQRAKTEVERLRQAVSGG
SSTDKDSAKGNAPPAPKSTARPASLEERKKQMAQLVAMGVAVPEEFRANMALAGDWQTTSETRIEVQQGLEGPTK
SVGIRKRKLEGDEEEDEHAPEPIINKGWGSRMRQYPVAQEDEGLDDLIASTKDIKRTKTFIPKVELDEQETATEQ
PTLTAKTEDDSFKPEAQETNESSEIKTEEPAQSSVEPVIEEKPQSEDATPGVVFKKRKPKAMRK*
Coding >Pro_DTO377G3_2|g3583.t1
ATGTCTGAATTCTGGAAATCAGCACCGCGCTACTGGTGCAAACAGTGCAAGGTCTTCATCCGTGACACGCCCTTC
GAAAAGACCCAACACGAAGCCAGCCCAAAACATCAAGGCAATCTCAAGCGCTTCCTTAGACAAATACACAATGAC
AATGAACAAAAACAAAGAGACTCACAACGCGCGAAAACCGAAGTCGAACGATTGCGACAGGCTGTCAGTGGCGGG
TCCTCCACCGACAAAGACAGCGCGAAAGGAAACGCACCGCCAGCCCCTAAATCCACAGCCCGGCCTGCTTCCCTA
GAAGAACGAAAGAAACAGATGGCACAGCTCGTGGCAATGGGTGTCGCCGTCCCCGAGGAATTCCGCGCTAATATG
GCCTTAGCAGGGGATTGGCAGACGACATCTGAGACAAGGATCGAGGTCCAACAAGGATTAGAAGGCCCCACAAAG
TCAGTTGGAATACGCAAGCGCAAACTTGAAGGCGATGAGGAGGAGGATGAGCACGCGCCTGAACCTATTATCAAC
AAAGGTTGGGGCTCGAGGATGAGGCAATACCCTGTTGCACAAGAGGACGAGGGCTTGGATGACTTGATTGCATCC
ACAAAAGATATTAAGAGGACGAAAACCTTCATTCCGAAAGTCGAGCTTGATGAGCAAGAGACAGCTACTGAACAA
CCTACCCTCACTGCAAAGACAGAAGATGATTCTTTCAAGCCAGAGGCGCAAGAGACGAATGAGTCAAGTGAGATC
AAGACTGAAGAGCCCGCTCAATCTTCAGTAGAGCCAGTTATTGAAGAGAAGCCGCAGAGTGAAGATGCTACGCCT
GGTGTCGTCTTCAAGAAGCGCAAGCCGAAGGCAATGAGAAAATAG
Transcript >Pro_DTO377G3_2|g3583.t1
ATGTCTGAATTCTGGAAATCAGCACCGCGCTACTGGTGCAAACAGTGCAAGGTCTTCATCCGTGACACGCCCTTC
GAAAAGACCCAACACGAAGCCAGCCCAAAACATCAAGGCAATCTCAAGCGCTTCCTTAGACAAATACACAATGAC
AATGAACAAAAACAAAGAGACTCACAACGCGCGAAAACCGAAGTCGAACGATTGCGACAGGCTGTCAGTGGCGGG
TCCTCCACCGACAAAGACAGCGCGAAAGGAAACGCACCGCCAGCCCCTAAATCCACAGCCCGGCCTGCTTCCCTA
GAAGAACGAAAGAAACAGATGGCACAGCTCGTGGCAATGGGTGTCGCCGTCCCCGAGGAATTCCGCGCTAATATG
GCCTTAGCAGGGGATTGGCAGACGACATCTGAGACAAGGATCGAGGTCCAACAAGGATTAGAAGGCCCCACAAAG
TCAGTTGGAATACGCAAGCGCAAACTTGAAGGCGATGAGGAGGAGGATGAGCACGCGCCTGAACCTATTATCAAC
AAAGGTTGGGGCTCGAGGATGAGGCAATACCCTGTTGCACAAGAGGACGAGGGCTTGGATGACTTGATTGCATCC
ACAAAAGATATTAAGAGGACGAAAACCTTCATTCCGAAAGTCGAGCTTGATGAGCAAGAGACAGCTACTGAACAA
CCTACCCTCACTGCAAAGACAGAAGATGATTCTTTCAAGCCAGAGGCGCAAGAGACGAATGAGTCAAGTGAGATC
AAGACTGAAGAGCCCGCTCAATCTTCAGTAGAGCCAGTTATTGAAGAGAAGCCGCAGAGTGAAGATGCTACGCCT
GGTGTCGTCTTCAAGAAGCGCAAGCCGAAGGCAATGAGAAAATAG
Gene >Pro_DTO377G3_2|g3583.t1
ATGTCTGAATTCTGGAAATCAGCAGTAAGTGTGAAATTTACCTGTCTAGAACCCTGCTGACTATTTCACAGCCGC
GCTACTGGTGCAAACAGTGCAAGGTCTTCATCCGTGACACGCCCTTCGAAAAGACCCAACACGAAGCCAGCCCAA
AACATCAAGGCAATCTCAAGCGCTTCCTTAGACAAATACACAATGACAATGAACAAAAACAAAGAGACTCACAAC
GCGCGAAAACCGAAGTCGAACGATTGCGACAGGCTGTCAGTGGCGGGTCCTCCACCGACAAAGACAGCGCGAAAG
GAAACGCACCGCCAGCCCCTAAATCCACAGCCCGGCCTGCTTCCCTAGAAGAACGAAAGAAACAGATGGCACAGC
TCGTGGCAATGGGTGTCGCCGTCCCCGAGGAATTCCGCGCTAATATGGCCTTAGCAGGGGATTGGCAGACGACAT
CTGAGACAAGGATCGAGGTCCAACAAGGATTAGAAGGCCCCACAAAGTCAGTTGGAATACGCAAGCGCAAACTTG
AAGGCGATGAGGAGGAGGATGAGCACGCGCCTGAACCTATTATCAACAAAGGTTGGGGCTCGAGGATGAGGCAAT
ACCCTGTTGCACAAGAGGACGAGGGCTTGGATGACTTGATTGCATCCACAAAAGATATTAAGAGGACGAAAACCT
TCATTCCGAAAGTCGAGCTTGATGAGCAAGAGACAGCTACTGAACAACCTACCCTCACTGCAAAGACAGAAGATG
ATTCTTTCAAGCCAGAGGCGCAAGAGACGAATGAGTCAAGTGAGATCAAGACTGAAGAGCCCGCTCAATCTTCAG
TAGAGCCAGTTATTGAAGAGAAGCCGCAGAGTGAAGATGCTACGCCTGGTGTCGTCTTCAAGAAGCGCAAGCCGA
AGGCAATGAGAAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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